ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637469 | MOLT-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◣ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

CDCA3
TMEM115
NPRL2
CYB561D2
NAA80
IFRD2
HYAL3
PEBP4
FEM1A
TCEA2
CALR3
C19orf44
SMPD3
TSNAXIP1
RANBP10
HDGF
MRPL24
BTRC
CDPF1
RHEX
TESK2
MMACHC
NUDCD1
PHB
UCKL1
CLPB
MAMDC2
UTP3
PRCC
AP2S1
ARHGAP35
ALDOC
ATP2C1
KBTBD6
C1orf159
FRG2C
ST3GAL2
KBTBD7
PI16
GPBAR1
PNKD
AAMP
NFE2
ARL4D
GSPT1
HHIP
PAFAH2
VARS2
GTF2H4
ATG4D
PKIG
IL33
ING3
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
AGBL1
RPL36
MICOS13
HSD11B1L
LOC102724770
DGCR6
CHMP4B
ARHGAP39
ZNF704
PPIAL4H
PPIAL4G
PHF12
EMILIN1
KHK
OST4
FBXL12
CD82
TOX2
ASIC3
SLC4A2
CDK5
PLCL2
CCDC146
ZFYVE1
WDPCP
MDH1
BANP
WDR74
STX5
AHCYL2
RASSF1
ZMYND10
HPSE
CYTH1
INTS9
HMBOX1
BOD1
PPP1R16B
UBR2
PCDH10
C3orf86
IL17A
PEMT
NKAIN4
EAPP
CALR
FARSA
RAD23A
LZTFL1
PPRC1
MAD2L1BP
GTPBP2
SCAF1
RRAS
CST5
TMEM11
RTL3
PPP1R12C
CTSH
SLC39A1
CREB3L4
CRTC2
NCR3
LTB
LST1
TPST2
CCM2
RUBCNL
ALDH1A2
ZNF331
STK17B
CXCR5
GRAP2
PARL
NUPR2
CHCHD2
ARHGAP25
STATH
SRPK2
GNA15
STAU2
CCBE1
SEC31B
NFRKB
ZNF225
ARHGEF7
NPIPA1
CD300A
IQGAP2
ZNF444
UNK
H3-3B
UBQLN4
RAB25
LAMTOR2
SUFU
ACTR1A
ORAI2
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
LAIR1
CRYGN
VCPIP1
C8orf44-SGK3
H2AZ2
BAIAP2
NTAN1
ITGA4
RBL1
KCTD9
CDCA2
CD1A
SLC2A8
APBA2
LRP2BP
CR2
CXCR4
RNF144A
VSX1
DGKA
PYM1
TAF12
PHF13
HEXA
CTU1
TMEM236
TMTC3
CEP290
KCNC2
VIPAS39
AHSA1
FXYD2
HECTD1
OR4D1
TSSC4
DSTYK
SLC35B4
PTPN6
C12orf57
TESPA1
PANK4
HES5
CHD1
PPIAL4F
PPIAL4E
PPIAL4D
GATB
CD1B
INVS
ERP44
SEPTIN9
MSL2
GSR
PRKD2
ACADM
KMT2B
FMNL1
ZNF337
SHQ1
NPIPB15
DEFB136
NRROS
EGFLAM
SLC2A6
SCGB1C2
SCGB1C1
ODF3
SYNJ2
TLR9
LSM4
GFRA4
EPHX2
EPHA2
SYMPK
FOXA3
SELENOW
GRAMD4
VPS50
HEPACAM2
DCLK3
ADA
TNIP3
TIMM21
FBXO15
NOP53
PSMF1
GPD1L
DDX23
NBEAL2
CCDC12
FBXO48
APLF
BIRC5
FAM193A
ZSCAN22
LARS1
SLA
NMT1
DCAKD
PVRIG
PTAFR
RIC8B
MDM4
ZNF784
PRR22
DUS3L
DUX4
OR10T2
ARHGAP24
LAT
SPNS1
BHLHE23
FBXL19
SSTR3
SEC14L2
FBXO46
MEIOSIN
RANGAP1
PYCR3
GFUS
RGL4
UBE2T
PPP1R12B
CD69
MAP1LC3B2
ZNF718
ZNF595
ZFYVE19
DNAJC17
WNK1
KRT10
LDLRAD4
RABAC1
KRTAP29-1
KRTAP17-1
KRTAP16-1
PLXNA4
PYGM
RHCG
TNFRSF13B
HDAC7
KANSL1
FBXW11
N4BP2L2
RPS9
RPS7
MED23
NAPA
TMEM107
JOSD2
ASPDH
CCDC90B
ZNF500
UNKL
C16orf91
PERCC1
WFS1
FRG2
MND1
FAM53B
ITGA6
ANGPT2
TNFAIP1
IFT20
NUF2
GPKOW
RIPOR2
RAB37
SLC9A3R1
SOX17
TMEM70
ELOC
EMP3
CCDC114
PRPF40B
BNIP3L
H6PD
TAS2R50
KIF2C
APBB1
TGM6
THYN1
ACAD8
MX2
CHPF2
ABCF2-H2BE1
ABCF2
RCSD1
TTC28
MTIF3
FNTB
ABHD12B
SOX6
C11orf58
TNFRSF18
TNFRSF4
CAMK1
GSK3A
SHISA5
NEK8
TRAF4
HHEX
TRIB1
SLC12A6
OSBPL5
AFF3
LEF1
ASB2
RETNLB
THEMIS
SCRIB
FGR
COL20A1
TFEB
CDKN2C
FMO1
ZNF513
SNX17
EIF2B4
OSER1
HRH2
SSBP1
STK25
FAM3B
BUB1B
PEX14
DFFA
SYTL2
IL32
SMARCAL1
SIRT2
NFKBIB
POLDIP3
CHCHD3
RPIA
IL17RA
BORCS7
HSPA13
SNX9
COX7C
RFX8
CAPN15
ZNF165
OR1F12
ORMDL3
GSDMB
ZNF736
CDK8
SIRT4
TSC1
GFI1B
AP2M1
DRC7
GNGT2
ABI3
SMAD2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NSFL1C
PEX3
ADAT2
DESI2
DRAP1
C11orf68
UBE2J1
STX6
CCDC69
ABRACL
PRRG2
NOSIP
ARHGEF3
SLC47A1
ZNF140
TRAF3IP3
PTCRA
ZNF354C
PSMA6
USP7
DEGS1
LMO2
MRPS18C
HELQ
IKZF3
PTPN3
RHOH
MYO1G
TMEM245
RTTN
PTCH2
ERAP1
NAA10
ARHGAP4
SLC4A8
GALNT6
PTP4A2
ICAM2
SLC33A1
H4C12
H4C11
H2BC15
H2AC15
TES
STAU1
ERGIC1
NOS1AP
SPATA46
C1orf226
PCNX4
CANT1
ZNF335
FAM222A
TOR4A
B9D1
MAPK7
MFAP4
ALG10B
RPGRIP1L
FTO
FOXN1
DEXI
CLEC16A
AURKAIP1
NME1
PROB1
SLC23A1
MZB1
SERHL2
RHOQ
ATP6V1E2
ZSCAN25
YBX3
CDT1
ZNF230
MED15
WT1
RIPK4
ZNF354A
F13A1
COPS4
GDE1
CCP110
DDX4
PTK2
AHSP
RNF168
SMCO1
GP5
PEX26
SMO
FASTKD1
ARHGEF12
CDK5RAP3
RCAN1
TTI2
ACSF3
RBM38
TMEM59
TCEANC2
GZMA
MRPL1
ANKLE2
LAMC1
ATP6V0A1
TLE3
KRR1
EVL
CBFA2T3
SYT12
UBE3C
TNFRSF1A
TM9SF1
IPO4
NCOR2
PADI1
CDK5RAP1
EIF3F
COL6A2
LGMN
TENT5C
MAPKAPK3
PHF19
NEIL3
GFI1
TFPT
PRPF31
ATP11B
ADORA2A
HEMGN
CXorf49B
CXorf49
ATXN7
DNTT
ERF
CFAP20
RUFY3
NSMF
INTS12
GSTCD
WDR87
SIPA1L3
MTF2
SMAD7
ZAP70
PALLD
SF3A3
FIGNL2
EVPL
TPGS1
COX16
RPS20
REPIN1
BCL9
FHAD1
ETV3
BCL3
PLCG1
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
SPON2
GABARAP
PHF23
DVL2
ATAD2
ESYT2
EPHA1
TTC13
ARV1
D2HGDH
USP3
PARP16
MKRN3
ZNF749
TBC1D21
ASXL1
RB1
AQP3
FAM185A
ZNF133
C20orf203
TTC33
TRAPPC3
MAP7D1
CCDC150
FCGR2A
TMEM239
C20orf141
THBS4
FILIP1L
SNAPC3
WBP2
CCND3
TAF8
MMP9
DYNC1I2
STAP1
ZNF56
ZNF408
ARHGAP1
RASSF5
PPP1CA
NET1
TBC1D10C
CARNS1
TTBK1
CCAR2
C8orf58
KCNN2
RAB1A
RPP40
TRIP4
PCLAF
TFAP2C
VPS37B
MXRA7
FOXP1
CCDC138
FAM228B
TP53I3
SF3B6
CD47
NDUFS7
ATF6
SLC25A19
MEIG1
CCL1
CCL13
TJP1
AKIRIN2
CD3E
CNOT6L
ALG10
ASPRV1
C5orf38
IRX2
CCDC200
TMEM45B
TMC8
TMC6
TGFBR1
TMEM101
SPC25
CEP85L
PTDSS2
ANO9
VOPP1
ZBTB45
SLC27A5
ZFYVE21
XRCC3
NFKBIZ
TLR6
TRIM47
ARHGEF18
FCRLB
DPEP1
EPSTI1
PLAAT5
PSMD11
POMT1
RCBTB2
TBC1D31
ZNF350
BLK
RLN1
DHRS11
BRF2
CCNG2
MCFD2
TTC7A
CNIH3
MYO18B
RASAL3
EHF
ARHGAP9
MARS1
ZNF224
CSTA
AEBP1
ARID3B
BCAR3
DUSP2
ASTL
CHMP7
SNRPD3
GUCD1
BICD2
TTF1
CFAP77
MAMSTR
POLD1
NR1H2
ARHGAP32
CTDP1
CISD3
RORC
FCGBP
NOP16
HIGD2A
NOL11
TAF1C
ADAD2
ARHGAP27
SLFN12
CIC
VAT1
RND2
ZMAT5
UQCR10
LCK
GUK1
GJC2
DYNLT1
DBNDD1
ZNF354B
MAP3K8
TMEM127
CIAO1
NUCB2
MRPS26
GNRH2
B4GALNT4
MRI1
C19orf53
RPL18A
ZNF227
CAVIN1
ZNF223
PPIP5K2
NUDT13
CLP1
YPEL4
ZNF226
SLC35E1
PA2G4
REXO4
ADAMTS13
SUSD3
NOP14
GRK4
MYLK4
ASAP1
TMEM262
TLE4
CACNA2D4
TNPO3
ALDH2
CNOT4
BUB3
HMX2
DTX2
YIPF2
TIMM29
IDNK
CYB561
ENOX2
SH2D3C
CDK9
SNX1
CIAO2A
ACTN4
SMIM3
CAMK4
PNLIPRP3
CHST12
RALGAPA2
MBNL1
TMEM229B
MTMR9
ARL5C
MEN1
MAP4K2
UBE2F
SUPT4H1
ZNF652
DPP6
TCF7
DCP1A
ZNF169
ZFYVE28
CFAP99
RPS26
ZNF101
ATP13A1
HIP1
AFF1
PEX5L
BPI
LTA4H
GNG12
JRK
NYAP1
WDR24
STUB1
JMJD8
ASNS
ACOT7
DDAH2
CLIC1
MSH5
DFFB
CEP104
RPL23A
TLCD1
RAB34
PROCA1
SUGP1
MAU2
THAP11
H4C14
H3C15
H3C14
NUTF2
CENPT
H2AC19
H2AC18
SMUG1
PIH1D1
ALDH16A1
SLC17A7
ZSWIM9
LIG1
BIK
RPS13
ATXN1L
IFIT3
MKNK1
MOB3C
EPAS1
ACTA2
LAMC2
USP48
ZCCHC8
KCNA2
CHSY1
MON1A
RBM6
STX18
NUP107
TMEM163
CXXC5
DLC1
ZBTB46
FKBP5
NDUFB8
HIF1AN
ARMC12
RPL29
LRFN3
GGA2
PDE6D
COPS7B
ZNF527
NDUFS3
KBTBD4
FAM180B
TOR1AIP2
TOR1AIP1
ESCO2
CCDC25
SCML4
S100A5
S100A4
S100A6
S100A3
CDK5RAP2
ZNF548
MRPS31
HIPK1
LSG1
ZNF343
NOTCH1
TFAP2E
RPL27
IFI35
ZP1
TMEM258
FEN1
GALK2
COPS2
VPS41
ADGRE2
MAX
SBNO2
FCGR1A
TSC2
NTHL1
RNF166
CTU2
OSCAR
NDUFA3
H4C3
H1-6
ARHGEF1
TOMM34
STK4
AGPAT3
NPY4R
NPY4R2
TSPAN14
ZNF789
ATP5MF-PTCD1
ATP5MF
GFM2
KCTD5
TMEM41A
DHX16
PPP1R18
NRM
REEP5
UBAC1
AGK
ZNF821
FAM168A
ETFDH
C4orf46
LIG4
ABHD13
DOK2
XPO7
NANOS3
GPR15
CLDND1
CYP2U1
MRPL30
MITD1
DEK
ZNF420
SWI5
GOLGA2
STING1
IL23R
NIBAN3
DNM1L
MYL6B
MYL6
SETD1B
ZNF37A
SDE2
RTN4
TMEM102
FGF11
CHRNB1
SPEM3
SPEM2
PCNP
TRMT10C
MLEC
ZNF688
ZNF285
GTPBP3
ANO8
SRMS
FNDC11
PRMT2
PKLR
FDPS
ATP2A3
ITGAL
ADD3
STMN3
RTEL1
SBF1
LRRC29
DAAM1
PLAC8L1
TRAF7
RAB26
LMNB2
PRKCI
ZNF207
C17orf75
ING4
RBBP5
SMIM33
XPNPEP2
ALKBH3