ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1013341 | HuCCT1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◣ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

KIF5C
MAMDC2
MTRNR2L2
MSH3
DHFR
MUC3A
PTPRN2
MTRNR2L1
MTRNR2L8
WDR74
STX5
LOC102724770
DGCR6
DUX4
TRIM48
ADAMTS9
COL23A1
RGPD2
RGPD1
SNAPC1
RGS19
OPRL1
LKAAEAR1
MTRNR2L9
SLITRK3
FRG2C
CACNB2
THBS1
CCDC200
ARL4D
IL32
KYNU
ZNF229
DRD4
EMILIN2
FRG2
CYP4F11
ZNF285
PHRF1
LGR6
DDAH1
CCN1
ART1
H4C12
H4C11
H2BC15
H2AC15
F3
MUC20
GPIHBP1
MMP8
EPN1
STX16
GSN
RAB14
FLT4
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
GALR1
H2BC14
H2AC14
SUGCT
MPLKIP
NAA80
IFRD2
HYAL3
CDCA3
UCKL1
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
TMEM115
NPRL2
CYB561D2
GPBAR1
CALR3
C19orf44
PHB
TCEA2
TESK2
MMACHC
SMPD3
CLPB
BOD1
HDGF
MRPL24
FEM1A
PNKD
AAMP
ST3GAL2
GSPT1
AP2S1
PAFAH2
ARHGAP35
SLC39A1
CREB3L4
CHMP4B
NUDCD1
CRTC2
TSNAXIP1
RANBP10
BTRC
TMTC3
CEP290
PPRC1
KBTBD6
PANK4
HES5
PEMT
AHCYL2
RPL36
MICOS13
HSD11B1L
KBTBD7
PRCC
DDX23
PPP1R12C
UNK
H3-3B
C1orf159
LARS1
UBE2T
PPP1R12B
CTU1
INVS
ERP44
ZFYVE1
PHF12
VCPIP1
C8orf44-SGK3
ZNF225
VARS2
GTF2H4
NTAN1
RASSF1
TSSC4
MAD2L1BP
GTPBP2
ZMYND10
BANP
CHPF2
ABCF2-H2BE1
ABCF2
SYMPK
FOXA3
ZNF444
TMEM11
ORMDL3
GSDMB
TNFAIP1
IFT20
SLC35B4
PYCR3
GFUS
SCAF1
RRAS
FASTKD1
UBQLN4
RAB25
LAMTOR2
DSTYK
ZNF513
SNX17
EIF2B4
SEPTIN9
RPIA
ASIC3
STAU1
WDPCP
MDH1
INTS9
HMBOX1
SLC4A2
CDK5
ING3
TTC33
TTC13
ARV1
STK25
SUFU
ACTR1A
CCDC146
ZFYVE28
CFAP99
SCRIB
ZSCAN22
GDE1
CCP110
TLE3
UNKL
TIMM21
FBXO15
GATB
EMILIN1
C16orf91
ZNF749
KHK
OST4
WNK1
COX7C
SSBP1
EAPP
MED15
SV2A
BOLA1
JOSD2
ASPDH
NOP14
GRK4
TBL3
RPS2
RNF151
UBR2
ZNF337
TMEM127
CIAO1
DEXI
CLEC16A
ZFYVE19
DNAJC17
AP2M1
MAF1
CYC1
ODF3L2
MADCAM1
TFEB
WDR97
TMEM59
TCEANC2
WDR87
SIPA1L3
ZNF56
MRI1
C19orf53
PEX14
TSC2
NTHL1
TOR1AIP2
TOR1AIP1
MIDN
ATP5F1D
SIRT2
NFKBIB
DFFA
UBAC1
PHF13
DESI2
TRAPPC3
MAP7D1
CTF1
BCL7C
RPS7
SMARCAL1
VPS50
HEPACAM2
BUB1B
NUF2
FBXW11
KMT2B
TMEM70
ELOC
RIC8B
CBARP
NMT1
DCAKD
ZNF517
ZNF34
RPL8
FBXO46
NOXO1
ZNF189
MRPL50
TFPT
PRPF31
SESN1
AURKAIP1
LRRC29
ING4
DYNC1I2
RPGRIP1L
FTO
IPPK
CCDC90B
MEIOSIN
BUB3
HMX2
PERCC1
PSMD11
RPS20
EMP3
CCDC114
RAB5C
ZNF235
SOX6
C11orf58
NDUFS2
ADAMTS4
PRRG2
NOSIP
USP48
ATP5PO
CAPN15
SLC25A19
TMEM160
THRAP3
RANGAP1
THYN1
ACAD8
DCP1A
RAB1A
LETM1
FBXL19
ZNF169
CNIH4
ZNF420
TRAF7
RAB26
PEX26
OSCAR
NDUFA3
TMEM101
CCAR2
C8orf58
FBXO48
APLF
PDE6D
COPS7B
NUDT13
LMNB2
VIPAS39
AHSA1
TRAK2
STRADB
CCDC150
ZNF224
CLP1
B3GALNT2
RBL1
ARHGAP9
CHCHD3
RALBP1
MARS1
LY6G5B
GPANK1
CSNK2B
C6orf47
APOM
YPEL4
RPL18A
TTBK1
SNX27
MED23
NOTCH2NLC
ZC3H11A
ZBED6
ZNF554
DDX49
COPE
ZNF354A
PTDSS2
ANO9
NOTCH2NLB
NOTCH2NLA
RABAC1
MON1A
ZNF350
NME1
KAT7
TMEM102
FGF11
CHRNB1
MYLK4
STK17A
WBP1
INO80B
FAM193A
SPEM3
BIRC5
GPR15
CLDND1
FAM185A
PANK3
CTDP1
ZNF384
RBM6
GPKOW
PA2G4
SMUG1
NFXL1
TMEM43
CHCHD4
UFSP2
C4orf47
CDK5RAP2
YPEL3
TBX6
UTP11
FHL3
SERPINI1
PDCD10
ZNF230
SPEM2
UBE2Q1
CHRNB2
HTRA2
DQX1
FAM222A
WRNIP1
CCDC174
UCHL5
RO60
SCAMP4
ADAT3
ZW10
CLDN25
BICD2
SF3A3
RPS6KB2
ZNF37A
NUP153
CALR
PNPLA6
CNOT4
SDCCAG8
CEP170
PTPRCAP
AKIRIN2
UTP3
ZBTB45
TMEM245
FAM228B
GPAA1
EXOSC4
LTA4H
ZNF133
CNOT1
RPS19
POLR2E
ZNF718
HBP1
RPS3
UBL7
ZNF527
PRR22
DUS3L
GPX4
GABARAP
ZNF227
SLMAP
ZCCHC4
ZNF595
RTN2
LIN37
PHF23
DVL2
WBP2
SLC33A1
INTS1
PROSER3
HSPB6
SAMD1
MISP3
C19orf67
MRPL20
CCNL2
ZNF226
NDUFS7
PKLR
FDPS
SNX1
CIAO2A
LAMP1
SPHK2
RPL18
NKIRAS1
FAM83E
HSPA13
PCM1
SYPL1
PIGU
NFKBIL1
DDX39B
ATP6V1G2
NOP53
SNRPE
PSENEN
IGFLR1
RPS13
MXI1
RALGAPA2
RPS26
NEK8
PRR5L
PGBD4
EMC7
SEC61A1
ZGPAT
ARFRP1
COMMD9
TP53I3
SF3B6
TIMM13
SLC27A5
PHB2
ZNF514
ZNF2
LUC7L
FAM234A
SLX1B
SLX1A
BOLA2B
BOLA2
ZNF484
CDCA8
C1orf109
PIH1D1
ALDH16A1
S1PR4
NCLN
CFAP410
QTRT2
CCDC191
MCRIP2
TMEM143
SYNGR4
METTL26
PTBP1
WFIKKN1
LRFN3
SCRT1
DGAT1
GUSB
RPP40
ZNF32
PRR14
FBRS
ZNF547
TRAPPC2B
TAF12
MTMR9
SPATC1L
WDR53
FBXO45
TPGS1
ZNF419
ENOX2
CLDN6
RPL15
TXNDC9
EIF5B
ZNF772
NDUFS3
KBTBD4
FAM180B
AHCTF1
UBALD1
MGRN1
CIC
SEC11C
MED27
TNFRSF12A
THOC6
HCFC1R1
RPL29
GALK2
CAND1
ZNF500
TTC1
SLC17A7
ZCCHC8
GSK3A
PSMD4
PES1
RAB29
FAM207A
SULT1A4
SULT1A3
HEXIM2
ASXL1
CWC22
EIF2D
DNM1L
FARSA
TMEM69
GPBP1L1
PEX12
AP2B1
RNASEH2C
KAT5
RPL23A
GINS3
CDK8
TLCD1
TERF2
ZNF343
RAB34
PROCA1
WAPL
FAM166A
TMEM186
PMM2
AQR
RPL37
CARD6
RCAN1
OPA1
ZMYND15
MED11
CXCL16
TMED9
B4GALT7
ZBTB7A
TSACC
CCT3
DBP
ZNF451
USP35
KCTD21
PSMD2
RAB30
IGSF8
UBE2J2
SCNN1D
CWC25
NOLC1
CCNL1
MAX
STPG3
CA11
CAPG
NCBP2AS2
NCBP2
PPP6C
PSMC4
RAB13
DDX47
GPR108
COPS7A
EIF1B
ZMAT5
UQCR10
GID4
ATPAF2
TMEM262
BOLA2-SMG1P6
TRIP4
PCLAF
UBA52
ZNF768
ZNF747
PSMF1
ALG10B
VAPA
LSG1
ILF3
SSR3
ADSS2
FAM53C
CDC25C
METTL3
SSR2
BOD1L1
KANSL1
ZSCAN32
ZNF174
EML6
RPS27
DOHH
PARL
MUS81
CFL1
SCAMP3
FAM189B
SLC38A9
THAP11
KCTD5
CATSPERE
RBBP5
HPS6
ARMH3
RPS3A
TRIP10
SHC1
THAP1
TMEM222
WASF1
L3MBTL2
CDC40
LEMD2
USP31
KBTBD8
COPS2
SUPT4H1
RPL27
IFI35
ABRAXAS2
ZNF805
AURKC
PRKCI
HIRIP3
ZNF17
EEF1AKMT2
EXOC4
PTPN6
C12orf57
MEN1
MAP4K2
GPR137
CLPP
AKAP8
FHIT
ZNF862
ZNF773
POLR2J3
MTR
ZNF789
ATP5MF-PTCD1
ATP5MF
VPS4B
SUGP1
MAU2
SELENOH
MBD1
CXXC1
GFM1
ZSWIM9
LIG1
TSN
C12orf43
SH2D3C
ZNF25
NCDN
KIAA0319L
ZNF584
CCND3
RETSAT
ELMOD3
TOR2A
ZNF586
NUTF2
CENPT
SASS6
SLC50A1
FBH1
CARS1
MRPS16
DNAJC9
ZNF567
LAT
RRP15
EIF3C
NDUFB5
MRPL47
RACGAP1
ZNF140
CSRNP2
RGL2
PFDN6
PPP1R13L
POLR1G
DPP9
ANKRD16
RPL22
RNF207
FBXL12
PRKCSH
CCDC151
PSMB4
ESCO2
CCDC25
TOR1A
SKP2
LMBRD2
ZNF277
DOCK4
PSMD3
VKORC1
TUT1
MTA2
P2RY11
TMEM199
SEBOX
POLDIP2
NARS1
PRSS53
EIF3D
SMN2
SMN1
RAD23A
POLRMT
FGF22
DPM3
GSTA4
GPT2
EIF3CL
YJU2
ALG10
CAPN10
SERP1
EIF2A
TMEM33
STMN3
RTEL1
N4BP2L2
VMO1
PSMB6
GLTPD2
TRMT1L
SWT1
XPOT
MRPS23
WDR46
ARHGEF1
ZNF684
DHX8
ZNF436
ZNF165
OR1F12
DEDD
RXFP4
CCDC124
RRP36
MEA1
TSNAX
ZNF45
VEZT
FGD6
EIF2S2
ERF
SIRT4
STX18
CDK9
SNAPC3
JRK
CIAO3
KATNB1
CNOT6
NAT14
VRK1
ELP6
IPO7
COPS8
C1orf54
RAB3C
DPH2
B4GALT2
ATP6V0B
ZNF101
TMEM41A
ATP13A1
ZNF628
SKIV2L
SF3B2
NELFE
GAL3ST3
INTS4
CORO1A
FZR1
NUP205
MRPS18C
HELQ
INTS12
GSTCD
CRK
DTX2
ZNF548
ZNF764
GGPS1
ARID4B
WDR45
IFRD1
ABT1
FRA10AC1
LTN1
COG2
DHX33
SFXN5
NFATC3
TOMM22
PUM3
CANT1
RAB7A
RPL12
LRSAM1
SPNS1
MAMSTR
SCYL3
MRPL54
APBA3
APH1A
RFX1
ALKBH8
GBA
YIPF2
TIMM29
DARS2
CENPL
FBF1
MRPL1
BET1
KRR1
GFM2
SERBP1
RPS5
KHDC4
SLC19A1
TIMM22
RBM28
GEMIN6
THRA
MIA3
FAM168A
ITPR1
KLHL20
IPO13
RAX2
SNAP47
JMJD4
R3HDM1
ZNF585A
ZRANB3
ZMPSTE24
SNAPIN
SLC39A3
ZC3H10
RPL41
EIF3F
BRIX1
USP15
MRGBP
OAZ3
MORF4L1
NMNAT1
LZIC
NOP16
HIGD2A
ZNF416
ZIK1
MYBL1
MRPS25
UCK1
MITF
ABCC5
ZNF599
SUPT5H
RPS16
FLAD1
CKS1B
SART1
PDE4DIP
PPIP5K2
ZNF180
TLE4
DMAC1
RAD52
TRUB2
COQ4
CNPY2
DCAF1
WDR24
STUB1
JMJD8
POLD1
NR1H2
DNAJC28
RWDD1
TATDN3
SLC12A6
NSL1
RPL34
RUVBL1
NUP107
RAB8B
TRMT2A
RANBP1
TRABD
DNAJC14
ACLY
MDM4
FBXO38
RAD51AP2
TRUB1
PARK7
ZNF691
PRAF2
TMEM109
PRPF19
ZNF221
GSC2
SETDB1
UBXN8
ZSCAN5A
BABAM1
WIZ