ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

NLRP12
ARL4D
VASP
LILRB5
LILRB3
LILRA6
AKR1C3
WDFY3
FMNL3
GATA4
DUX4
TMEM45B
SPATC1
LAMP1
TMEM39B
CDCA3
DENND3
NFKB2
SEMA4B
GNA15
LOC102724770
DGCR6
MEF2C
WDR74
STX5
PLSCR1
XRCC5
OR10J1
ADGRG1
FRG2C
SFTPD
ABT1
ZDHHC3
EXOSC7
AGTRAP
GNG2
KLF2
PPIAL4H
PPIAL4G
GSTA4
MTRNR2L1
CMPK2
FEM1A
TLR4
IL1B
CD40
CBFA2T3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC18A2
CALR3
C19orf44
A2M
PGK1
AXL
ITGB2
PRSS3
ADAM28
CXCL8
GPBAR1
MRGPRG
MRGPRE
SMPD3
RPS19
SPDYE13
STEAP4
IL7R
SPDYE9
SPDYE8
SPDYE15
SPDYE11
UBXN8
PDLIM2
PTK2
NUDCD1
BOD1
SLC12A6
NUTM1
NOP10
CXCL1
SIGLEC11
LILRA3
ZFAT
APOL6
PSTPIP1
NIBAN3
RNF149
H4C12
H4C11
H2BC14
H2AC14
FGF6
CCL26
NAA80
IFRD2
HYAL3
ZNF221
MAMDC2
NAIP
ACTN2
H2BC15
H2AC15
DAZAP2
DNAJC5B
NEDD9
DMWD
DMPK
GLRX
CD1A
PPIAL4F
PPIAL4E
PPIAL4D
DOCK8
CD1C
NCF2
FRG2
ZNF718
ZNF595
SUN1
PEX12
AP2B1
SNX11
CBX1
IVD
COL8A2
ALOX15
DCAF12
GBA
NR3C1
CLEC4G
TMEM104
NAT9
H4C3
H1-6
LIFR
CES1
TPCN1
IQCD
TMEM91
B9D2
MAP3K5
DDX58
TMTC3
CEP290
LRP3
NBN
KBTBD6
ASGR2
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
EAPP
PPP1R12C
AKR1A1
B4GALT3
GHRL
CTU1
EXT1
MTMR9
NUDT4B
NUDT4
NLRP2
RPS20
BCL3
GPR88
H2BU1
H2AW
SMCO2
INTS9
HMBOX1
CYTH4
MS4A3
CLPB
ZNF780A
ZFYVE1
ZNF444
SH3BP2
UBAP1
TMEM115
NPRL2
CYB561D2
PDE4DIP
SPINK8
HLA-DOA
FBXW4
CYRIB
PIK3CB
VCPIP1
C8orf44-SGK3
MINDY3
ZSCAN30
PBK
DYNC2H1
TASL
BID
NPY4R
NPY4R2
SIGLEC6
HDGF
MRPL24
SIGLEC9
USP3
TRIM41
EXD1
CHP1
NDUFS7
CTDSP1
TRABD2A
LAMB3
GPAA1
EXOSC4
CEBPD
TSNAXIP1
RANBP10
RPL36
MICOS13
HSD11B1L
CD33
DNAH2
EFNB3
NUF2
SIGLEC5
C10orf105
SPRED2
PANK4
HES5
RPS9
PEX3
ADAT2
LTB4R
LTB4R2
CIDEB
RUBCNL
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
SUCNR1
ST3GAL2
NBEAL2
CCDC12
RAB4B
MIA
ZFYVE28
CFAP99
EDDM13
NABP1
SLC23A2
SLC1A5
HPSE2
BMF
SLCO2B1
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
IPCEF1
KBTBD7
MRPL30
MITD1
NEUROG1
TESK2
MMACHC
MEFV
CCR5
CLCA2
PAFAH2
S100Z
BTRC
TRPV4
TPRKB
PROS1
ARL13B
ZNF225
RFX1
CHMP4B
NFATC3
CMIP
PNKD
AAMP
BRF2
TP53I11
TNFRSF10B
MTF2
ADGRE2
PPRC1
SST
KIF25
MRPS18C
HELQ
PLEKHM3
RAB24
PRELID1
LIM2
C19orf84
DHRS7B
DDX18
MS4A6A
TAF12
CCDC152
TYROBP
NFKBID
HCST
TMEM243
TLE6
FCGR2A
GSPT1
TRIP4
PCLAF
BAZ1A
RMND1
ARMT1
CCDC200
GAB2
RAB39A
DHRS12
TOR1AIP2
TOR1AIP1
H3C13
H2BC18
ZNF226
FIGNL2
GNA11
INPPL1
FOLR2
CTSB
P2RY14
MUCL1
TM6SF1
AP2S1
ARHGAP35
ALOX5AP
KRR1
INVS
ERP44
CCAR2
C8orf58
PI4K2B
PROKR1
F11R
IFI16
CARD8
SEPTIN9
RMDN2
ARHGAP25
RFX2
PHB
EHD1
AP1B1
KCTD12
LCP1
RAC2
CCDC102A
ADGRG5
PDE6H
NDFIP2
MED23
KANSL3
FER1L5
COPS7A
BANK1
LRRC37A
IL1RN
UCKL1
CSF1R
DISC1
YES1
PEMT
ZNF227
TMEM107
FRG1
SNCA
CTTN
PAF1
MED29
ZFP36
HSH2D
LMO2
ENOSF1
SLC37A2
DHX16
PPP1R18
NRM
RNASE3
TAF1B
ARID5A
CCER2
KIAA0930
STAP1
MTRNR2L6
TBL2
ICAM1
POMP
GRPEL2
CASS4
PPP2R2B
EIF4G3
FCGRT
CCDC146
CLEC10A
NME7
BLZF1
SPDYE12P
ATP1B2
PPIAL4C
PPIAL4A
TAL1
INSC
ALDH2
JOSD2
ASPDH
INPP5D
RASSF4
CAMKK1
SIGLEC1
GOLGA8Q
PRCC
ZSCAN22
IGF1
DCP1A
ZCCHC4
CD82
DNAJC10
ANKRD63
ADGRE1
ANKRD18B
UTP3
MLLT1
FAM227B
DTWD1
ITGA4
LAT2
CACNB4
SREK1IP1
CWC27
RD3L
CHI3L2
SERPINB6
PGBD4
EMC7
IER3
FLOT1
RIPK1
INTS12
GSTCD
ANKRD39
SEMA4C
DUSP6
MKNK1
HMOX1
PRRG2
NOSIP
LRRC37A3
AURKAIP1
NOTCH1
AHCYL2
WASHC4
MMP9
SORBS3
TBC1D19
RYK
RPS7
FBXO46
MEIOSIN
PRKCE
GPR68
VPS26A
LILRA2
RUNX1
SH2D3A
VAV1
ASPHD2
SMC6
GEN1
PLEC
TXK
PARP10
GRINA
ARHGEF12
S100A8
FRA10AC1
SMAD2
SAMSN1
GATB
ULK1
TEFM
MTIF2
SHISA5
TREX1
TTC33
GALK2
COPS2
CHST13
TPM4
ARPC3
IPPK
GABPB2
MLLT11
PHC2
ERLIN2
OBI1
CTSG
TMEM231
RFFL
RAB27B
CA13
PPP6R1
TMEM154
SCAMP4
ADAT3
DTX2
ABHD17A
FGGY
OLFML2B
CAPG
MARCO
ABCA9
POLE3
C9orf43
ARHGEF3
NOD2
RASSF5
THEMIS2
RPL6
PTPN11
NFE2
UBR1
SSBP1
DPY19L4
LYSMD2
SYMPK
FOXA3
PEAK3
LYRM1
PDXK
PRR5
SF3A3
TEAD3
CCDC149
CNDP1
TRNP1
TNIP1
SSBP2
DR1
UBE2T
PPP1R12B
TBPL1
CELF1
BORCS7
RPL5
MPEG1
FASTKD1
LCE3B
LCE3A
IFNA21
TMEM68
TGS1
SYT8
TNNI2
TSSC4
GOLGA7B
VPS13B
PHF12
DDX1
ZNF175
ACTRT3
MYNN
SPAG9
PAQR8
H3C3
H2BC3
LSM14A
RPS6KA1
DHRS4L2
SLC39A1
CREB3L4
CRTC2
DHX8
PIK3CG
BSG
ZAR1L
BRCA2
LRRC71
LIPM
MAP1S
RBBP5
ZC3HAV1
YIF1B
KCNK6
GTF2H2C_2
GTF2H2C
MRPL42
RNPEP
ADGB
SLC25A10
MRPL12
H4C6
H3C6
H1-3
SCRIB
RPGRIP1L
FTO
PPP1R11
POLR1H
RNF39
NDUFB7
CEACAM21
NCALD
VOPP1
PROB1
SPATA24
SYNE3
BNC2
SLC35B4
ZNF268
CSF2RB
XCR1
NSMAF
RPL18A
ANXA2R
ZFP64
JAK3
RPIA
CARD19
IRF9
ARHGEF18
FAM133B
BCL2L13
FAM228B
TP53I3
SF3B6
DMXL2
EPN1
TRIM31
TRIM35
PTK2B
RXRA
LYN
BCAN
TACC1
OR1D5
GTF2H3
EIF2B1
CAMK1
FAM167A
RPH3AL
RNF157
TMEM11
MRPL48
PCBP2
ZNF224
LSG1
DPY19L3
LCMT2
ADAL
PPIP5K2
STK10
LPO
ZNF554
SECISBP2L
FASLG
TCTEX1D1
ZBTB45
SLC27A5
CCR1
SEC14L1
PLCXD2
INO80D
CUEDC1
NDUFS2
ADAMTS4
ALG10
MRPL1
PIP4K2A
TTC14
CCDC88A
NINJ2
DSTYK
ZNF350
MOB1A
CDK5RAP2
SLC24A1
RALB
TULP2
NUCB1
PDE4B
CAVIN2
CHCHD5
SLC38A10
FCAMR
NDFIP1
ZNF56
CCDC90B
BRPF3
SLC1A4
PRODH2
APPL2
FUT10
SDSL
HCK
TMEM212
CD79A
SCGB1C2
SCGB1C1
ODF3
SEC11A
PLAC8
PLVAP
ACTA2
PPM1M
TWF2
SCHIP1
TMEM242
DPYSL2
POLR2J3
ZC3HC1
USF1
TSTD1
IRX5
TMEM229B
FCGBP
PARP2
CCNB1IP1
PLEKHA4
PPP1R15A
PYCR3
GFUS
JRK
SLC39A13
METTL9
IDH3B
ADAR
SCAMP2
MFSD14A
CHRNA6
KCNQ3
SIRT2
NFKBIB
PSMF1
H3C4
H4C4
RHOH
H2BC6
PEX2
STING1
ZNF513
SNX17
EIF2B4
SLC9A1
TACO1
PHF2
SELPLG
OLFML3
HFE
TFPT
PRPF31
MRPS23
CPEB3
MARCHF5
STX7
ADPRH
PLA1A
CCDC9
SAMD4B
GMFG
NUCB2
SMG6
MFSD10
CAPN2
CERS3
DCANP1
TIFAB
CD93
ZNF235
XYLT1
VSIR
PSMA8
PDE4A
PCM1
TTI2
COMMD2
CHMP7
GNB4
RGS12
CMKLR1
TMEM222
HUS1
TEX46
KDM1A
H2BC5
H1-4
KLHL33
MIER2
TSC1
GFI1B
TPK1
ASF1B
AQR
SRXN1
LARS1
EMILIN1
KHK
OST4
UBR2
BRWD1
PIGV
ZNF518A
IL17RD
LILRA4
GOLGA8R
NME1
RPL37
CARD6
UBE4A
ANKRD40
INKA2
DDX20
PRKD2
MAML2
ZNF286A
RIC8B
EIF2D
SUPT7L
SLC4A1AP
STON2
SIRT4
CALM3
PPP5D1
PSMD9
HPD
SUSD3
SNTB1
LMBR1
OR52K2
BCL2A1
LPAR5
ACRBP
GTF2H2
NFX1
ACTR3
MCUB
KDM6B
PLEKHG3
NRG4
CCNL1
HMGB1
USPL1
ZNF846
RBCK1
HIVEP2
LILRA5
TCEA2
KLHL20
ARHGDIB
TYK2
PIWIL4
FOXP1
ZBED4
MPG
RHBDF1
LPAR1
ORC2
MPRIP
GAS6
RASSF2
RAB3IL1
CD5L
SCAF1
RRAS
OAZ3
INO80C
ASAP1
MORF4L2
H1-2
ISG20
TATDN1
NDUFB9
POLE4
HERC6
LRRC25
ZC3H6
RRS1
ADHFE1
CTNNB1
TRDMT1
H4C8
HIBCH
GNGT2
ABI3
CREB3L2
SLC22A18
SAR1B
SPOP
DEFA1B
DEFA1
TMEM262
SIRT6
ANKRD24
KDM3A
TRIP12
FBXO36
LRRC8D
TMEM131L
N4BP2L2
MED4
LGALS12
PSMA6
PALLD
INTS10
IQSEC1
TEX44
TNFAIP1
IFT20
USP15
SLC44A1
POLDIP3
ARID3B
PEBP4
GOSR1
SLC27A3
PRIM2
PPP3CC
SERPINE1
PLAT
PRKCD
ALG10B
SHKBP1
UXS1
ITPRIP
MALT1
C1orf159
MKRN3
SV2A
BOLA1
ZNF148
RNASE1
ING4
MRPS31
PTPN3
GFOD2
TRIM69
GPR162
TMEM41A
SLC45A4
MOB4
EMC4
RXFP1
CWC25
NUBP1
AOPEP
PES1
NUFIP2
VAMP1
APBB1IP
TAPBPL
TCN2
CCND3
SETDB1
DCAF10
EPHB4
H4C7
H3C7
H2BC9
ADTRP
SLC35E2A
PSMC1
MARCHF6
TMEM204
DDX23
FBXW11
ESCO2
CCDC25
FBXO28
BNIP1
PLEK
ROPN1L
SQOR
ANKRD22
VPS50
HEPACAM2
PPIL2
ITGAM
CRYBB1
FCRL4
PLAUR
GPR108
TVP23B
HIP1
C3
FAM207A
DRAP1
C11orf68
PSMA1
EFHB