ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
STX5
EAPP
SRSF7
HEXIM1
JPT1
MFSD11
SRSF2
TAF12
ZBTB45
TRIM28
JUN
ZBTB4
SLC35G6
POLR2A
RPL5
PPM1D
FAM53C
CDC25C
H4C14
H3C15
H3C14
H2AC19
H2AC18
RPL3
C15orf39
RHOB
NGRN
C12orf65
ID4
TUBA1B
NPR1
ILF2
HNRNPAB
FUS
HSPA1B
CIRBP
FAM174C
THADA
BCAR3
EIF4G2
TMEM167B
SFPQ
POLG
PIK3R3
CALR
FARSA
RAD23A
EIF4A2
KLF6
ZC3H10
RPL41
PPP4C
ALDOA
UNK
H3-3B
RSPH3
H4C15
CDH11
RCC1
TAF4
H1-10
PRDX1
RPLP1
EEF1A1
ATF4
SND1
COQ8A
TRA2B
DUSP1
IQCN
JUND
SRSF6
HNRNPH1
POLG2
DDX5
CEP95
MDM4
SLC38A2
TPI1
SPSB2
GTF2H5
SETD5
INTS6
TRAF7
RAB26
RPS14
KCTD13
SRCAP
LOC730183
YWHAE
ZBTB37
PARP16
SOD1
GPR61
GNAI3
RPS11
RPL13A
TMEM242
SESN2
FAM219B
ECI1
GTF3C6
PABPC4
SIRT4
INTS2
WDR1
HNRNPA2B1
CBX3
COQ2
NCOA7
GBA
RS1
PPEF1
KNTC1
UBB
H2BU1
H2AW
EIF5
NUP133
FBXL3
SLC9A1
BTG3
UBE2S
ACTB
CD68
EIF4A1
VPS72
PIP5K1A
CITED2
SEPHS2
NASP
RBM39
RPS8
NKIRAS1
RPL15
MTRNR2L1
TBL3
RPS2
RNF151
NDUFB10
RPL3L
CZIB
SMC1A
RIBC1
AAAS
DLG2
E2F3
SNRNP48
RPS4X
ZNF143
SRSF5
ZBED8
NOL11
RPL11
PRRC2B
EEF2
MYLIP
STMN1
SLFN11
OAZ1
TFRC
DNTTIP2
FSCN1
EIF1AX
NDUFV3
BAMBI
IDH2
SMOC1
NOTCH2NLC
NOTCH2
CBX5
HNRNPA1
SPECC1L
NSF
LTN1
NOP14
GRK4
DPP9
HSP90AA1
EFCAB2
LTA4H
RBM26
LOC105378979
TP53BP2
RRP1B
HSF2BP
PPIA
NFYC
SCAMP2
SRSF1
POLE4
HMGN2
MAT2A
RPL6
PTPN11
CALM2
S100A13
S100A1
CHTOP
C19orf48
HSDL2
DDX17
SLC1A5
PPP1R10
MRPS18B
ATAT1
MTMR11
SF3B4
TOB1
RBMX
LUC7L2
FMC1-LUC7L2
FMC1
EIF1
YIPF6
PSRC1
RBM12
CPNE1
NUP214
FAM166A
STPG3
TUBB4B
TSPAN3
LUC7L
FAM234A
POLR2J3
TBCE
MTRNR2L2
MSH3
DHFR
TMEM107
NABP1
MAPT
SOD2
WTAP
LIN9
FAM200B
PSMC6
RPL31
ALDH3A2
MTHFD2
BTBD10
ABCA5
ARIH1
KIF5B
DEGS1
TIA1
PCYOX1
RNF220
XBP1
MTHFS
B4GALT3
MKNK2
GADD45A
TUBD1
RPS6KB1
DCPS
MCMBP
C16orf72
SLC27A3
LAP3
MESD
ATP5PO
AFF1
RAB11A
RPL19
CACNB1
CHRNA5
WRAP53
TP53
DCAF8
MORC3
SIPA1L1
NCL
ZDHHC4
UBC
TAF1D
C11orf54
TM2D3
PKM
DGCR8
RPP25L
DCTN3
ALOXE3
HES7
TAF15
HINT3
EIF4A3
TAOK1
SNX3
STAT1
SRRM2
HSPA5
NOTCH2NLB
NOTCH2NLA
YBX1
FZD8
HEXIM2
KLHL11
ARPC1A
TGOLN2
BBC3
H4C2
H4C1
H3C1
H1-1
ZNFX1
MYBL2
CHEK1
CDK1
UGCG
MANSC1
BORCS5
MCL1
DYNLL2
BLOC1S5
SRSF3
MSH6
SDHAF4
RNPS1
UGP2
ID2
H2AX
DPAGT1
THOC3
TRAF4
SACM1L
HMBS
DLX1
CALM1
ZNF771
ULBP1
VAMP1
CENPH
ESR2
PHAX
ALDH7A1
YWHAG
RBM25
C6orf62
RNF122
MTF2
FAM71E1
EMC10
IER5
H2AZ1
DNAJB14
DDX3X
GGPS1
ARID4B
HERPUD1
LSM14A
NDUFAF3
IMPDH2
DALRD3
ACTRT3
MYNN
GGA2
ADPGK
ZNF280C
AGL
USP10
PHF10
OAZ3
ZBTB11
RPL24
RCBTB2
KLC1
C1QTNF6
IFIT3
EXOSC9
HDAC1
SLC20A1
DHRS12
RPS15
KIF2C
ACAD9
RPL37A
WBP11
C12orf60
RBBP6
SMYD4
RPA1
KLHL15
MTRNR2L8
DHX9
ASCC1
ANAPC16
MAPK3
GDPD3
CEBPA
POLR3E
ATF3
ACTG1
MAP3K21
MESP1
NFKBIL1
DDX39B
ATP6V1G2
INTS5
GANAB
MAD1L1
IL4I1
NUP62
ATF5
NUDT1
MRM2
MICU2
HMGB2
CFAP20DC
GDI2
LRCH3
UCHL1
TSC22D2
USP1
RNF146
MSX1
ZBED4
UFL1
PSMA3
PPY
ATP1A1
RGPD2
RGPD1
RPSA
RPL10A
AMZ2
NXF1
SP1
GORASP2
CDK12
RPL13
TXNDC15
HSPA1L
HSPA1A
LSM2
CLSPN
HNRNPDL
ENOPH1
SOAT1
TEDDM1
GLUL
RPL29
LENG8
DYNLL1
SRSF9
SLC22A4
HDHD3
PCIF1
TTLL12
DMWD
ACSL3
PMPCA
ENTR1
EZR
SLIT2
H2AZ2
ZWILCH
SNAPC5
RPL4
NCOA5
PCBP1
CBY3
BUB3
HMX2
PTPN6
C12orf57
NEK4
ITIH1
TARS3
WDR35
HACD3
ADAM17
ZMYM1
BRD2
HNRNPR
MTF1
MTMR2
YWHAQ
EPC2
BPHL
PRADC1
CCT7
FTL
FDXR
LEFTY1
ZSWIM7
TTC19
TMEM63A
RPS19
UMPS
THAP9
SEC31A
CSNK1E
PHGDH
RPL12
LRSAM1
FBF1
COMMD4
EXOC7
TRA2A
FTH1
DNAJC25-GNG10
DNAJC25
PUM1
UBA2
DDIT4
KANSL2
SLC5A3
MRPS6
TLE3
HINFP
ZBTB25
ZBTB1
PRIMPOL
CASP3
TSNAX
ZNF830
CCT6B
RPL22L1
PRMT2
BCLAF1
TEX30
DNAH14
MAN2C1
ERMARD
ACTN4
MRPL17
DPY30
FAM89A
RBBP7
TUBGCP3
DDX19B
AARS1
TRIM7
RXFP4
KHDC4
PMF1-BGLAP
PMF1
TMED4
DDX56
ZCCHC17
SNRNP40
MFSD14A
LRIF1
SAT1
GNA13
SLC7A5
RAP1GDS1
ATP2A2
ISL2
FASN
GLS
RTL10
GNB1L
CHIC2
SLC25A19
SLC35E2A
ATXN2L
MPZL1
PAN2
IL23A
ARF6
DNMT1
RPAP2
GLMN
MSRB2
ING3
BOD1L1
RPLP0
GCN1
COMMD6
CKB
TRMT61A
TTC32
PUM2
BTG1
PIGF
CRIPT
SOX4
PPP6R2
MYL6B
MYL6
MAEA
SPTAN1
COX20
PELP1
ARRB2
INTS7
DTL
ANKRD13C
MAGI3
HIRIP3
CANT1
HSP90B1
SLC26A2
C22orf39
ZNF627
SLC16A1
NDEL1
AKAP7
TUSC1
CSRNP2
LRRC37A3
REEP5
ELOVL1
CDC20
ADM
PRKACB
BORCS6
THUMPD2
RBM15B
MANF
MCM7
AP4M1
MRPS21
NOP56
SZT2
MED8
SREBF1
YEATS4
RBMXL1
KYAT3
ZYG11B
SLC33A1
GPATCH3
TBC1D22A
RBM34
SIL1
LAG3
ZBTB2
PHF14
PTMS
HOXD13
HOXD12
EVX2
NEFL
CANX
TOMM20
HES1
CLN5
MATR3
SETD9
CD164
ARL6IP1
YWHAH
NPIPA3
NPIPA2
ILKAP
CPT2
STT3B
PLA2G10
C22orf24
HFM1
AKR1A1
MOB4
RPS15A
PIP4K2B
PI4K2B
MIF
UGT1A4
NAV2
NCKIPSD
UGT1A3
RPS7
RPS3
CSE1L
HSPA8
MAMDC2
ADAMTS1
ATG16L2
TEX14
RAD51C
IFNAR1
DHX15
TRIM13
MBOAT2
PRPSAP2
SURF2
SURF1
RPL7A
MED22
DNAJC27
SMURF2
EPM2A
OXLD1
CCDC137
PABPC1
CSDE1
RPL9
LIAS
SLC25A3
C21orf91
SCAF4
FAM117B
C15orf61
SUMF2
CKS2
SECISBP2
PSMB3
PCGF2
RBM8A
PEX11B
SRP68
ZACN
GALR2
HACL1
BTD
HSPA6
DNAJB1
PRDX3
P2RX4
TM9SF4
SLC3A2
XPO1
ARL1
IP6K1
NUP188
DOLK
TAOK2
GUSB
ZNF3
COPS6
PPP1R8
LUC7L3
ZNF131
BMP2K
GAPDH
SLC25A4
SLC39A10
POLE3
C9orf43
ALAD
EIF3L
ANKRD54
SGTA
THOP1
RNF149
SQSTM1
NSRP1
RASSF1
ZMYND10
CYCS
POLR3B
TUSC2
PDSS2
NTMT1
C9orf50
MOSPD2
FANCB
TRIM41
SEC14L1
MRPS14
NSUN4
TSGA10
SNRNP70
MCM5
OSTM1
TMEM116
ERP29
MPI
TRIM65
MRPL38
MACROH2A1
KMT5B
FOXO3
DBNDD2
H4-16
H2AJ
EIF3A
ZC3H4
USP25
TMSB10
ING5
RPP38
ACBD7
TOE1
MUTYH
LZTR1
H4C3
H1-6
HEATR1
TOB2
MAP3K3
OLA1
NT5DC1
NMT1
DCAKD
KIF5C
FAM133B
UCHL3
SRSF4
DIP2A
ENO1
PCGF6
PRPF38B
ARL15
ANXA11
EXOSC10
CDKN2AIPNL
UBAP2L
C1orf43
RANBP2
TMEM39B
VPS37B
PMPCB
ZKSCAN2
GTF2A1
UHRF1BP1L
CCDC136
OPN1SW
ZMYND15
MED11
CXCL16
PRPF4
CDC26
ZNF589
SELENOW
CNOT11
SYP
EZH2
MDM2
MVK
ACACA
TADA2A
SLC16A10
MRGBP
RPL23
ADIPOR2
BCL2L13
ATP6V1E1
HYLS1
BTBD1
THNSL1
OGFR
TBC1D4
USP39
C2orf68
TMEM150A
ATXN7L2
CYB561D1
NGB
MYO1G
PRRC2C
NBPF1
HNRNPU
SLC25A11
RNF167
PFN1
GP1BA
ERO1B
URB2
TAF5L
H4C8
PPP6R1
IREB2
CD320
USP24
TMX1
BCAS4
RBSN
RPS24
POLR3A
SPRYD3
SMARCC1
ZNF839
CCDC200
CMTR1
ARL17B
NAXE
GPATCH4
H2BC21
H2AC21
H2AC20
MSTO1
TNFRSF10B
USP38
PTBP1
C7orf25
TMEM129
TACC3
SLBP
CLNS1A
SRRM1
ADI1
MRPL40
HIRA
PSMG3
RPF2
MRFAP1L1
BLOC1S4
TMEM128
PYCR2
TPRA1
TCAIM
UBTD1
MMS19
SMIM13
ATN1
ZDHHC14
MUC1
PARN
BFAR
SERTAD2
HASPIN
CCNL1
ZNF565
ZNF146
POLR2J2
PUS7
RINT1
IMMT
TBC1D2B
UBE2Z
MRPL35
COIL
SF3B1
PSTK
BSG
GEMIN8
STIL
POLD2
STRAP
DDX6
VIM
IPO7
MRPS15
C10orf143
PHF2
TNRC6B
NPM1
ZNF326
LYPLAL1
PPP1R27
MCRIP1
ANKRD31
GEMIN4
PITRM1
FARP2
RBFOX2
MRPS16
DNAJC9
PARK7
FBXW2
MAP4K1
EIF3K
HACD2
NARF
CYBC1
SCN11A
WDR48
MEF2A
ZFAND5
PSMA4
ENAH
UBQLN2
SLTM
STARD7
B2M
PFKL
POU4F1
CCZ1B
HNRNPD
ANGEL1
LATS1
OSCP1
ZNF574
GRIK5
UPF1
ALG6
PPP1R12C
POLR2E
GPX4
GABPB2
MRPL39
MLLT11
MYDGF
MAP2K2
SDHC
MPZ
RERE
SELENOT
DARS1
RPS13
RPL17-C18orf32
RPL17
C18orf32
ING1
CARS2
HLCS
LDHA
SLC25A36
CSK
PCMT1
CKAP2
VPS36
TXNRD3
WNK1
USP48