ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375362 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◣ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

ARL4D
VASP
NLRP12
LOC102724770
DGCR6
FRG2C
DUX4
NFKB2
CDCA3
LAMP1
GATA4
AKR1C3
MAMDC2
CMPK2
DENND3
FMNL3
LILRB5
LILRB3
LILRA6
WDFY3
MTRNR2L1
GNA15
SPATC1
ABT1
PLSCR1
TMEM45B
WDR74
STX5
AGTRAP
PGK1
STEAP4
OR10J1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SFTPD
PDLIM2
GSTA4
CALR3
C19orf44
XRCC5
BOD1
NIBAN3
NAA80
IFRD2
HYAL3
GPAA1
EXOSC4
FEM1A
CBFA2T3
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
H4C12
H4C11
H2BC14
H2AC14
FRG2
ZNF444
SMPD3
KLF2
CTDSP1
CTTN
PPIAL4H
PPIAL4G
NEUROG1
GSPT1
ADGRG1
RPS19
ZFAT
CHMP4B
SEMA4B
H2BC15
H2AC15
FGF6
TMEM39B
SLC18A2
RNF149
DCP1A
PSTPIP1
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
SCAF1
RRAS
DMWD
DMPK
NLRP2
UBXN8
NUDT4B
NUDT4
CMIP
PEX3
ADAT2
NUDCD1
DCAF12
DYNC2H1
SLC12A6
NUTM1
NOP10
KBTBD6
ZFYVE28
CFAP99
SORBS3
RPL36
MICOS13
HSD11B1L
DDX58
TMEM243
NDUFS7
GBA
NBN
MEF2C
FBXW4
CCL26
CYTH4
CXCL8
NBEAL2
CCDC12
ZNF221
EXD1
CHP1
BCL3
MTF2
ZCCHC4
ZDHHC3
EXOSC7
CSF1R
SH3BP2
DNAJC5B
JRK
DPY19L4
PBK
PANK4
HES5
MRGPRG
MRGPRE
CYRIB
GPBAR1
PNKD
AAMP
PRSS3
TOR1AIP2
TOR1AIP1
NDFIP2
MED23
PPP1R12C
TSSC4
MTMR9
ARHGEF1
CD79A
GPR88
MTIF2
PAFAH2
INTS9
HMBOX1
SIGLEC1
TMTC3
CEP290
GRPEL2
TSNAXIP1
RANBP10
KBTBD7
APOL6
ZBTB45
SLC27A5
AXL
POMP
H2BU1
H2AW
NFATC3
NCF2
EAPP
DAZAP2
TYROBP
NFKBID
HCST
ZC3HAV1
PGBD4
EMC7
CLPB
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
PEX12
AP2B1
SREK1IP1
CWC27
CD1A
ST3GAL2
GTF2H2
GNG2
TRPV4
C1orf159
CYP4V2
JOSD2
ASPDH
SLC1A5
TLR4
TBPL1
RPS20
PRR5
ZNF554
TPRKB
MAPKAPK3
CISH
FBXW11
HSH2D
ACTN2
CCAR2
C8orf58
SLC25A10
MRPL12
IL1B
UCKL1
IL7R
ZC3H6
LRRC37A3
SLCO2B1
SH2D3A
VAV1
ARID5A
AKR1A1
PEMT
BANK1
ZNF718
ZNF595
USP3
KMT2B
GLRX
FAM207A
TMEM104
NAT9
CD33
RIPK1
TMBIM4
BMF
CALM3
PPP5D1
HPSE2
NUF2
CD40
MRPS31
SLC39A13
H3C13
H2BC18
MS4A3
BTRC
DRG2
DTX2
KANSL3
FER1L5
SYMPK
FOXA3
SF3A3
SSBP2
VCPIP1
C8orf44-SGK3
DOCK8
TMEM115
NPRL2
CYB561D2
FRG1
AURKAIP1
TIMM21
FBXO15
FAM227B
DTWD1
TPCN1
IQCD
ADAM28
MEFV
PHF2
CTU1
LILRA3
PTK2
FRA10AC1
C10orf105
COL8A2
ICAM1
TMEM91
B9D2
TGFB1
MRPS18C
HELQ
TRDMT1
BORCS7
PLEKHM3
RBCK1
AP2S1
ARHGAP35
IPPK
B4GALT3
SIGLEC9
ZNF76
SLC27A3
DHRS12
ODF3L2
MADCAM1
RPS5
NAIP
RAB24
PRELID1
MINDY3
RNF220
ZSCAN22
CCDC9
PPP6R1
PRKCE
SST
TCEA2
NR3C1
BAZ1A
FLT3
A2M
TNFRSF10B
CES1
HLA-DOA
CHPF2
ABCF2-H2BE1
ABCF2
HIBCH
OLFML2B
SSBP1
ARPC3
LRP3
KIAA0895L
EXOC3L1
E2F4
ELMO3
SLC24A1
LCMT2
ADAL
EXT1
RFX2
ARHGAP25
UNC45A
HDDC3
TAL1
PAF1
MED29
INO80D
ZFP36
WNT2B
H2BC5
H1-4
HDGF
MRPL24
SEPTIN9
ZNF175
TMEM222
SCRIB
THAP1
CCDC200
H4C3
H1-6
SPPL2A
ANKRD40
PROB1
SPATA24
LYN
IPCEF1
ADGRE2
PI4K2B
SCNN1A
LTBR
ITGA4
TMEM68
TGS1
LRRC59
CHMP7
TLE6
DDX23
GHRL
PSME3
BECN1
MAP3K5
LARS1
GTF2H3
EIF2B1
GNB4
CXCL1
TESK2
MMACHC
POLRMT
FGF22
PROS1
ARL13B
RPL29
RMDN2
DNAJC10
UBAP1
POLE4
ZNF333
DENND4B
ZNF780A
RASA1
ARID3B
SLC38A10
SPDYE12P
TAF1B
CHCHD5
SNX11
CBX1
DRAP1
C11orf68
VPS13B
PYCR3
GFUS
MUCL1
TMEM11
MRPL34
DDA1
ABHD8
JMJD1C
CEBPD
TOMM22
BNC2
NSMAF
TMEM204
ASGR2
ZNF513
SNX17
EIF2B4
KEAP1
LIM2
C19orf84
SPINK8
RRM2B
DNAH2
EFNB3
PPRC1
SIRT2
NFKBIB
FAM228B
TP53I3
SF3B6
LRFN3
NDUFS3
KBTBD4
FAM180B
TRIM41
POLR2J3
RNPEP
RPS3
NEDD9
MAPK1IP1L
ALOX15
EIF2D
MRPL30
MITD1
ZNF148
ZC3H3
STAT1
ANXA2R
APPL2
FUT10
ITGB2
ANKRD18B
NSFL1C
H1-2
KLHL33
SLTM
XCR1
KIF25
RUBCNL
INVS
ERP44
ELOB
PRSS33
ZFP64
KASH5
H3C4
H4C4
H2BC6
BRF2
RMND1
ARMT1
ADGRE1
CCPG1
C15orf65
RPS15
DR1
ALDOA
CCR5
CCR2
ZNF180
TDRD9
ATP5MPL
INO80C
RAC2
GNA11
TMEM39A
POGLUT1
SAT1
MRPS28
TNFAIP1
IFT20
FBXL19
MAPKBP1
LYRM1
TTC33
COX18
PSMF1
INTS12
GSTCD
DNAJC11
PEAK3
NOD2
LTB4R
LTB4R2
CIDEB
PPIAL4F
PPIAL4E
PPIAL4D
OPA1
ZNF286A
ZNF410
INPPL1
FOLR2
RGS12
UCHL5
RO60
HMGB1
USPL1
TIMM10
SMTNL1
SNUPN
IER3
FLOT1
CD1C
SMC6
GEN1
LILRA2
SIRT6
ANKRD24
AARS2
ADAP1
CHD1L
PRKAB2
MOB4
EFCAB2
KIAA0930
NOTCH2
LMO2
LRRC71
PIWIL4
PHB
TRABD2A
ZFYVE1
RPL27
IFI35
NTAN1
ZNF749
SEC14L1
GTF3C6
FNTA
RHBDL1
RHOT2
DPY19L3
GPR15
CLDND1
SLC44A1
RPL5
CHST13
PLAT
RPS9
TSC1
GFI1B
NCBP3
PRKD2
FBXW7
WDR55
DND1
RASSF4
ZAR1L
BRCA2
REXO1
DSCC1
ZNF350
C6orf89
TMEM242
GPR68
RALB
ASNSD1
ASDURF
PSMA8
ADGB
RPS6KA1
DCSTAMP
JUND
TBL2
RASSF2
CTSG
WDR87
SIPA1L3
TMEM229B
TP53I11
POR
AP3M2
ECSIT
CNN1
TRIM25
CALR
RAD23A
NDUFB8
HIF1AN
HNRNPUL1
PIP4K2B
RBM28
SPRED2
NPY4R
NPY4R2
FOXS1
CCDC124
CFAP298-TCP10L
CFAP298
LILRA4
ACTRT3
MYNN
TRIM44
ANKRD39
SIGLEC11
SEMA4C
LIPM
NDUFB7
TSSK6
NDUFA13
INTS10
PDXK
SDSL
ZNF225
ARHGEF18
PCM1
KMT2A
CTSB
RFESD
RPP38
ACBD7
REX1BD
DNAJB2
AP1B1
CEACAM21
ENOSF1
RASSF5
FZD1
RNF125
REEP3
ERMARD
TMEM123
TSC2
NTHL1
LRRC29
SAMD1
MISP3
C19orf67
VSIR
DHX8
MRPL44
SNRNP200
H3C8
H2BC10
OBI1
HCK
HPS6
ARMH3
KCNK9
PRRG2
NOSIP
PA2G4
COPS7A
RUNX1
SIRT1
BLOC1S5
SDHAF3
TRAM1
USP32
YES1
LIFR
CCER2
DCANP1
PNPLA6
POLR3B
RSU1
LHX9
C1orf53
PIK3CG
SLC35E2A
SGF29
TSG101
TMEM231
TFPT
PRPF31
S1PR4
NCLN
RSAD1
CHAD
MARCHF7
EDDM13
SLC33A1
SCRT1
DGAT1
PARK7
ERICH4
DMAC2
KCTD18
DCLRE1B
AP4B1
SMPD1
ANKRD46
CCDC152
PPP2R2B
HEXIM2
NOTCH1
NCR3
LTB
LST1
H4C6
H4C7
H3C7
SLC12A3
H2BC9
PLEKHG3
MLLT1
RRS1
ADHFE1
DHX16
PPP1R18
NRM
NFE2
UBIAD1
RCC2
ABCA9
BRWD1
HMOX1
PGBD2
RPIA
ASIC3
SLC4A2
CDK5
EMP3
CCDC114
NUP54
TEFM
RCOR3
BID
RAB4B
MIA
ERMAP
LAMB3
SVBP
EXOSC3
ZNF557
HINT3
NFKBIA
MTRNR2L6
UNK
H3-3B
RPS7
ZNF226
CCDC97
INPP5D
PLIN5
LRG1
TRAK2
STRADB
MDM4
GTF2A2
AHCYL2
UTP3
TRIB1
TSPAN10
NPLOC4
ZSCAN30
MRPS23
PRSS8
PRSS36
PIP4K2A
PSMA1
ATXN2
CAPN15
PISD
H4C2
H4C1
H3C1
H1-1
H4C13
H3C11
H2AC16
H1-5
TRIP4
PCLAF
WASHC4
CIPC
HSPE1-MOB4
HSPE1
HSPD1
TOMM6
PRICKLE4
FRS3
TXNDC15
LSM14A
RMDN1
CPNE3
MYC
SYNE3
CPQ
CRH
UBE2T
PPP1R12B
DSTYK
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
MAP1S
WDR41
KDM4B
ZNF358
MCOLN1
GARS1
RFC2
TEX22
CLPP
MACROH2A1
FKBP1A
SNRPB
DISC1
PEX2
STON2
ZNF227
MRPL3
RAD54L2
THOC3
MAIP1
NEUROG3
SLC39A1
CREB3L4
CRTC2
CCDC150
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
RBM17
HENMT1
MS4A6A
THEM4
BIRC2
HIGD2B
BBS4
MRPL1
TRIM35
PTK2B
EEF2
POLR2M
MYO18A
GAS6
GTF2H2C_2
GTF2H2C
LONP1
CATSPERD
C8orf33
CDKN2AIPNL
HUS1
POLR3D
CCDC88A
ANKRD13D
ZNF235
PDE6D
COPS7B
SEC13
MRPL16
PPIL2
SCGB1C2
SCGB1C1
ODF3
ZNF623
ZNF558
MBD3L1
EIF4G3
RYK
ALOX5
UNKL
C16orf91
PERCC1
FMNL1
STOML1
PML
FIGNL2
SUN1
APBB1IP
STING1
PIK3AP1
SLC35B4
H2BC21
H2AC21
H2AC20
TLN1
CREB3
TNIP1
H3C3
H2BC3
MAK16
FEM1B
DHRS7B
CEBPA
GSK3A
ZNF696
PLCXD2
CAPNS1
SOX6
C11orf58
CTDP1
MRPL21
IGHMBP2
PLD3
C19orf47
MAN2C1
ROM1
EML3
B3GAT3
MED4
GABPB1
SCAMP1
OLFML3
CAPG
EPHB4
PDSS1
SYCE2
BLID
PRCC
EMILIN1
KHK
OST4
CCND3
METTL25
CCDC59
YARS1
S100PBP
CLK3
ARHGDIB
IRF9
IL1RN
POGLUT3
CDK5RAP1
C10orf88
UBTF
GAB2
AVEN
SNCA
SERPINE1
SIGLEC6
TMEM70
ELOC
BRIX1
USP15
FAM3C
TPM4
SMAD5
QSER1
PECAM1
STK25
POLG
TNFRSF10A
NINJ2
ZNF512
C2orf16
ATG16L1
ZNF331
RECQL4
LRRC14
MFSD3
GPT
OCSTAMP
UPF1
SPHK2
RPL18
FAM83E
LUC7L2
GABPB2
FMC1-LUC7L2
FMC1
IQGAP2
MLLT11
TATDN1
NDUFB9
FCGR3A
BSG
NRGN
TEX44
ERLIN2