ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023329 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◣ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

HIBADH
SPATC1L
SESN1
FBH1
ANKRD16
PKNOX1
SP2
KDM4B
ACAP2
DNM2
RFX1
ZNF687
PLAG1
CHCHD7
ZSWIM3
ACOT8
TMEM60
PHTF2
MAF1
CYC1
WDR97
RAB5B
PMEL
CDK2
FRMD5
MRTFA
UBE2J2
SCNN1D
NLK
ZBTB32
SLC19A1
GOLGA6L9
SHC1
FLAD1
CKS1B
TRAF2
CYTH2
ANKHD1-EIF4EBP3
ANKHD1
EVI5L
HIP1
GOLGA6L4
G3BP1
JUP
KAT6B
GOLGA6L10
ZNF718
AK2
BAZ2A
ATP5F1B
TLE3
CIC
OGDH
SP1
PANK2
CBX5
HNRNPA1
ZNF595
OSBPL2
AKTIP
H2AZ2
STT3A
ZNF141
ABHD2
MAMDC2
GATAD2A
SUFU
ACTR1A
CGGBP1
ZNF654
ZMYM5
FBXO24
LRCH4
RBM27
C7orf50
OSBP
CEP131
ANKZF1
PXMP4
SLC25A25
NAIF1
TOP1MT
RHPN1
RAB11B
PPP1R36
HSPA2
ZMYM2
STIP1
FRG2C
TNIP1
TMEM160
MPZL1
MSANTD4
PPIA
ZSWIM4
CTTNBP2NL
NFATC2IP
CD68
EIF4A1
SLC26A2
NFE2L1
TDRKH
DCTN4
BCL2L1
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
WFS1
NCOA2
ELMO2
PABPN1
XPO1
FAM126A
FKBP5
HTT
GDI2
OXLD1
CCDC137
SLC25A41
KHSRP
RPLP0
GCN1
CENPA
TMEM218
SPRYD3
GOLGA6L3
PWWP2A
SLC25A42
MEAK7
SFXN5
ETV5
RAB40C
TMEM45A
HLTF
YPEL2
SCAI
HBP1
PRRC2B
RPL36AL
MGAT2
RAB5C
CDR2
RAB3A
PODNL1
DCAF15
MED30
LOC102724770
DGCR6
PLCL1
RNF34
SEL1L2
MACROD2
CHD6
KIF1B
ZFYVE21
XRCC3
FAM166A
STPG3
SLC34A3
TUBB4B
CDH15
TCERG1
MUC1
RRBP1
SFXN3
PDZD7
SIPA1L2
ZNF564
EIF2AK3
IP6K1
DUX4
FAM222B
TEPSIN
NDUFAF8
MLLT1
NUMB
TRAFD1
PRDM11
GATAD2B
ATF7-NPFF
ATF7
ENSA
CBLB
MYH10
MYH9
BAIAP2
PRC1
TOM1L2
DRC3
KMT5C
TRAPPC6B
PNN
MAP3K3
FMNL3
EFNB2
PGAP2
CANX
ZNF281
UGP2
FRYL
ARL4A
HDGFL2
CYB5A
PLIN3
FOXK2
MYH14
TXNDC16
ENPP5
CCDC61
DOC2A
TLCD3B
C16orf92
HNRNPC
HNRNPL
ERCC2
TARS2
HGH1
MROH1
SPATA25
NEURL2
CTSA
ZSWIM1
PCF11
TOP2A
KIAA0513
MXD4
CRLF3
ATAD5
SP4
SAP30L
TSPAN15
EHBP1
STK17A
ZSCAN32
ZNF174
TCF3
AKAP8
ZNF555
PLEKHH2
CNNM2
ERI3
MTMR12
RPUSD3
DNAJB5
LLGL1
TRIM32
ASTN2
MAML1
KCTD7
IER5L
DNAJC14
OTULINL
JAKMIP1
DAZAP2
ACTR2
EPHB3
TLE1
EPHA7
BCAS3
PHF20
PODXL2
CCDC200
ZNF691
ASPH
SPSB3
NUBP2
MRPS34
EME2
PCDHGA1
TAF7
TP53BP1
KIAA0232
ENTPD7
ZNF200
GNAZ
MPRIP
OSBPL3
MEGF9
USP20
C9orf78
RBM39
MIEF2
FLII
SHKBP1
TTBK2
LRRC56
HRAS
R3HDM1
ZRANB3
VIPR1
ZNF48
MYLPF
TBC1D10B
FANCF
SYP
PRICKLE3
PMS1
ORMDL1
IRS2
TRIM9
STPG1
NIPAL3
HESX1
APPL1
ZNF695
ABCA7
FAM72C
FAM72D
STARD3NL
HNRNPR
RSBN1L
CEBPG
MPHOSPH8
RAB40B
DCUN1D4
MEF2D
ZC3H6
STAT3
GET4
RTRAF
PDPK1
CEMP1
PLEKHA8
FKBP14
RPN2
MROH8
JOSD1
GTPBP1
NUPR2
CHCHD2
UVRAG
KLF5
RUVBL1
DAPK3
KANSL1
PPP2R5A
PDP2
ME2
SLC25A19
NUBP1
SLC46A3
HEY1
IVNS1ABP
SMAD2
PPP3CA
NXT1
UBP1
GOLIM4
C12orf65
RPUSD1
CHTF18
TMCC2
TPCN1
IQCD
FRG2
TIAM1
LOC150051
GLRX5
MAST4
EEA1
MLH1
EPM2AIP1
SRGAP1
RFX2
NR2C2
TSACC
CCT3
ZCCHC14
SMIM22
ROGDI
KMT5A
TANGO2
ARVCF
SP3
GPR158
MEFV
DPP3
FZD4
ALKBH5
NCK1
FOXO1
PPFIBP1
UBTD1
MMS19
TRIM35
PTK2B
INTS3
MRPL37
CYB5RL
SMARCD2
KAT7
ADRM1
GATM
SPATA5L1
PCNX3
MAP3K11
PEF1
EFNA3
ZNF492
GAS2L3
ARAF
ZNF563
AGER
RNF5
AGPAT1
ZBTB7A
SSBP2
MAFA
GLCE
C16orf72
TRAPPC11
RWDD4
SLC41A1
TOP2B
DMBX1
PBX1
VPS35
PRMT1
CREBRF
KCTD9
CDCA2
C22orf39
GNA12
YWHAZ
IGSF9B
GALNT18
TUBB
MDC1
ORC2
SIX2
JPT1
ARRDC3
TRAF7
RAB26
PC
CNFN
KDM6A
PBX3
RHCE
MACO1
MAPK9
AKAP5
RPS24
POLR3A
NUFIP2
SLC25A28
JPT2
SEPHS2
SPAG7
DIAPH3
CAMTA1
ZBTB18
ANP32E
CCDC153
ENO1
CIT
DRAP1
C11orf68
FOXN3
SPC24
PDE6D
COPS7B
FYN
EIF5
HNRNPAB
HOOK1
GLIS1
SSBP3
NXPE3
SYPL1
GLCCI1
PLCG1
ANP32A
SRP19
PADI2
FAM72A
CCDC102A
ADGRG5
RGS14
LMAN2
BAZ1B
MRPL20
CCNL2
NF2
ZNF626
HSPA5
GOLPH3L
MRPL34
DDA1
ABHD8
BBX
ITSN1
CRYZL1
AP5Z1
FMN1
WBP1
INO80B
MOGS
IL6ST
INIP
ZNF443
PSKH1
NRN1L
SARNP
ORMDL2
RAB39A
MARCHF3
RAPGEF2
SEPTIN9
FICD
ATP7B
ALG11
N6AMT1
RPS5
DDX11
MAPK8IP3
ERAP1
LMTK2
RMI1
HNRNPK
FKBP8
SLC39A3
PIM1
TMEM53
ARMH1
IVD
PER2
PGK1
HNRNPLL
PAX9
ACTN1
OTUB2
GPR108
TRIP10
PCYOX1L
SCAMP2
ZNF519
IGSF8
EIF3L
ANKRD54
OTX1
RALGPS1
PPM1K
HACL1
BTD
LINC02210-CRHR1
STK11
OPA3
WBP1L
TDP1
EFCAB11
KBTBD3
AASDHPPT
ZNF724
EIF4A2
TSEN54
CASKIN2
LLGL2
KLF9
ZC2HC1C
ACYP1
GPBAR1
PNKD
AAMP
ZDHHC24
ACTN3
OXSR1
NR3C2
PPM1B
PRKACA
DNAJC27
DGCR8
PSMB3
PCGF2
PITX3
GBF1
AZIN1
CCNG1
FHIT
MTOR
CNOT3
LIN37
PROSER3
HSPB6
SORT1
PPP6R3
GFPT1
JARID2
SUN2
WDR81
TLCD2
INAFM2
ACTR1B
PAOX
ECHS1
RAB8A
ATP5F1E
SLC39A1
CREB3L4
CRTC2
WDR74
STX5
DPY19L3
FAM111B
SMARCA2
PRADC1
CCT7
TSKS
AP2A1
COQ7
JAG2
NEMP1
NAB2
TNRC6B
NAXD
PTPN13
TYW1
SBDS
BBS10
HDAC11
SELENOO
ARL4D
TMTC4
ZNF143
GRPEL1
PDIA6
ALKBH7
PSPN
RPL10
C5orf38
IRX2
RGMB
GDI1
ATP6AP1
BPGM
CFAP410
COPG2
DYNLRB1
BNIP3L
FAM228B
PFN4
GNA11
HDAC4
RGS9BP
ANKRD27
RWDD2B
USP16
BUB3
HMX2
KSR2
AKAP13
CIRBP
SDC2
MCM3
MARCHF2
RPS11
RPL13A
CTPS1
CBX8
NADSYN1
DHCR7
CAND1
BCL9L
MIA3
TMEM161A
ZNF211
HSP90AB1
INPP5B
ZNF774
ING1
CARS2
LIX1L
POLR3GL
ANKRD34A
PDXP
RHOB
LCORL
SLFN5
CREB3L2
BAHCC1
MAFB
KANSL2
SLC15A4
ELAVL1
PRKD2
TEN1
ACOX1
PITPNM1
ECHDC3
TLE6
YIF1A
TMEM151A
RRAGC
MTFR1
PSENEN
IGFLR1
FKBP3
FANCM
PRPF40A
ARL6IP6
HS3ST3B1
NBR1
RTTN
GPR84
NFIL3
MAF
ZNF367
ZBTB20
FAM174C
TPPP
ISOC2
POLD2
RNF20
CEP152
BICRA
TOM1
CPT1A
DUSP10
RRP36
MEA1
CCDC91
ECM1
ZSCAN20
CHPF2
ABCF2-H2BE1
ABCF2
ARL17B
HINFP
ARL17A
RBM4
ZNF823
KCNAB2
KANK3
PGD
GRK6
TTLL5
ERG28
ZNF98
SETD1A
ORAI3
ZNF44
OTUD5
DDX19B
AARS1
C19orf81
NEK7
ATP6AP2
F11R
STX7
MAN1A1
DROSHA
C5orf22
ZNF493
LAMTOR1
ANAPC15
AMER1
RNF13
JTB
UBFD1
EARS2
TRIM45
NRXN2
ZNF91
S100A14
S100A16
USF3
APOA2
TOMM40L
KMT5B
POLR2G
ZBTB3
SPDYE14
SPDYE10P
CASTOR2
SYCE1L
MON1B
ZNF418
ZNF727
KMT2A
LTN1
SFPQ
SLF2
PACSIN2
ZNF77
HMGN1
NSD3
LETM2
ARHGEF9
PAFAH1B2
ZNF799
SAMD4B
GMFG
RCOR1
YJU2
ZNRF2
SUZ12
RNF187
RPL18A
KDSR
LOC100129484
TNRC18
LAMTOR4
MAP11
MED7
MCM7
AP4M1
RTN4
HEXIM2
BAMBI
ZBED5
MTRNR2L1
PGP
E4F1
PRSS16
TBC1D10A
MAD1L1
NUDT1
MRM2
TYW1B
EPB41
SUOX
COL23A1
NOVA1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RFX3
MAGI1
MCU
ZNF775
ZDHHC13
SNX25
CFAP97
KLHL25
USP3
BRPF3
CNTN1
RUVBL2
GYS1
SURF4
ASF1B
DDX49
COPE
ZNF101
ATP13A1
MRGBP
MZF1
STARD5
RHBDD1
IRS1
EIF1
ZNF92
RBM15
CHD8
MAP2K3
PER3
IL10RA
ESR2
PRKCI
HNRNPA0
RNF6
COL5A1
HERC3
ZNF552
INPP5A
PKNOX2
YBX1
DLGAP5
BBS12
ZNF14
ZNF436
MTHFD1
TPRG1L
STARD7
KDM4A
XXYLT1
FAM117A
TRIQK
MUC20
TMEM41A
SSR4
IDH3G
STXBP2
XAB2
PCP2
KANSL3
FER1L5
FGFR3
RSPH4A
FAM53C
CDC25C
TLE2
GALNT2
UPRT
TMEM14A
WDR45
ID2
RNF139
SLC35E2A
TMEM170A
SPPL3
PNPLA8
PTDSS1
MTERF3
CREB3L3
DNAJB1
TECR
SPRYD7
VEZT
FGD6
GALNT10
LAPTM4A
ZNF441
ONECUT2
ANO10
HAUS7
TNIK
CDCA7L
SENP5
DEPP1
SOCS5
ZNF726
DDX59
ELF2
PCYT1A
PTMA
MAP3K9
ATP5PD
LMNB2
LUC7L2
GGA1
SYT7
SH3GL1
CHAF1A
ZIC3
C19orf48
POC1B-GALNT4
POC1B
GALNT4
MUC3A
GIT2
ANKRD13A
UAP1
TMEM242
ZNF124
H4-16
H2AJ
TSPAN4
POLR2L
CD151
FAM76A
WWP1
CERS6
MBIP
UBE2C
LRP10
PCP4L1
FAM104B
SETD5
ZNF440
PJA2
PXMP2
POLE
PSMB10
LCAT
CTRL
KIAA0895L
EXOC3L1
E2F4
MGAT4A
NOL3
ATP1A3
MRPL18
TCP1
PNLDC1
SH3GLB2
MIGA2
GLIPR1L2
ZNF680
ZBTB25
ZBTB1
HEATR5A
C1QTNF6
CIZ1
DNM1
SMDT1
PHETA2
NAGA
ZNF516
DLL4
LSM4
FRA10AC1
CSE1L
GMNC
ITGB1BP1
CPSF3
ZNF430
URB2
TAF5L