ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX535453 | A-375
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◣ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

WDR74
STX5
EAPP
PHC2
EXD1
CHP1
LIMK1
SEMA6A
H4C14
H3C15
H3C14
H2AC19
H2AC18
DUX4
STX16
DPY19L4
H4C15
FAM98B
KIF5C
STX18
MTRNR2L2
MSH3
DHFR
H4C12
H4C11
MRPL21
IGHMBP2
H2BC15
H2AC15
DDIT4
SAR1B
GSTA4
NUF2
IST1
MAMDC2
H2BC14
H2AC14
AAR2
GBA
NR1H3
ACP2
TAF12
TUBGCP3
FRA10AC1
MTRNR2L1
ZNF207
C17orf75
SMARCD2
NME1
SLC44A1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UCHL5
RO60
H3C13
H2BC18
GALK2
COPS2
DMAP1
TRPV2
H3C4
H2AC7
H4C5
H2BC7
TPRKB
PHLDA1
SLC20A1
SF3A3
RAD54L2
FEM1B
RRP15
RCAN1
SLC9A1
JRK
GTF3C3
C2orf66
RASSF5
H1-2
RARS1
H3C3
H2BC3
DSTYK
TBC1D19
RPL37
CARD6
SNAP47
JMJD4
DCAF10
VWA8
RBBP5
ATR
TATDN3
NSL1
TMEM107
EIF1AD
CST6
BANF1
NPAS4
H4C4
H2BC6
S100A14
S100A16
MRPL16
CDKN2AIPNL
H2BC5
H1-4
RPS7
NAA80
IFRD2
HYAL3
RPTOR
IER3
FLOT1
EIF2D
USP30
STX3
TOP3B
NDUFB7
NOTCH2
SELENOH
RAB5IF
MAN2C1
ACOT7
BCL9
WDR31
BSPRY
CDK5RAP1
DHRS3
KMT2C
TRIB3
ZSCAN30
FCGR2A
SIRT4
PCID2
CUL4A
MTRNR2L8
TDG
C12orf73
NDUFA12
SPOP
HPCAL1
BFSP1
DCP1A
GTF2H2C_2
GTF2H2C
STAT3
OGT
YWHAE
SNRPB2
DRG2
NTSR1
CLUAP1
C16orf90
H2BC21
H2AC21
H2AC20
PDE4DIP
SSBP1
TACO1
SPRY4
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
COMMD2
VIRMA
TEFM
RPS6
WDR36
KLHL20
TRIP4
PCLAF
HEXA
TRIAP1
COX6A1
EIF1
C11orf49
BNIP1
S100A2
METTL9
LRRC47
E2F6
CT45A10
LAMP1
SLC24A1
PEX3
ADAT2
NDUFS3
KBTBD4
FAM180B
MTF2
YARS1
S100PBP
CSRNP1
JUNB
IRS2
UCKL1
WDR24
STUB1
JMJD8
ZNF212
HMGB1
USPL1
EEF1A1
VANGL2
LARS2
ST3GAL2
TEKT2
ADPRS
TMA16
H4C2
PROB1
KANSL3
FER1L5
H3C2
H2AC4
SPATA24
SLC27A1
ZNFX1
COL23A1
INTS12
GSTCD
MRPL44
P2RY11
EIF3G
MANBAL
SPATA25
NEURL2
CTSA
ZSWIM1
ADPRHL1
STAT6
WNK4
VPS25
TM9SF1
IPO4
MRPS23
FBXW2
AP3B1
PDE6A
GTF2H2
UNG
ALKBH2
TMEM101
CCNL1
PARP16
TMEM256
NLGN2
PSMF1
IFI16
RTN4
CHD2
PYDC5
GPRC5A
DPY19L3
GSTP1
WWP2
TSPYL5
ZNF513
SNX17
EIF2B4
AP5S1
PLEKHM3
NECAP2
PYGB
CRTC1
ALG10B
KIF2C
GAB2
CD22
CD109
MRPL3
RPL32
ADNP
DNAJC24
DCDC1
DMXL1
GUSB
DPP9
ZCCHC24
IL24
NDUFS7
NOC4L
DDX51
TTPAL
VWA5A
TMEM242
ZNF391
AGMO
TOR1AIP2
TOR1AIP1
TMEM262
SLC3A2
CTSC
DMAC1
DDX1
RTF2
DNAJC25-GNG10
DNAJC25
GGNBP2
TBL3
RPS2
RNF151
NOXO1
HTR5A
S1PR2
PAFAH2
NFXL1
ARHGEF12
WDR11
H4C6
H1-3
H4C7
H3C7
SNAI1
SLC50A1
NDUFC2-KCTD14
NDUFC2
EFNA1
RPS5
SSBP2
STMN3
RTEL1
RBM28
SREK1IP1
CWC27
PRRC2B
SNRPB
ATF3
ARIH1
TRUB2
COQ4
ZC3H6
ACBD6
H3C6
DDX23
TVP23B
NCBP3
PMPCA
ENTR1
NDUFB10
RPL3L
SIT1
KIAA0895L
EXOC3L1
E2F4
ELMO3
RAB18
RCOR3
CCDC107
ARHGEF39
H3-2
ITGA3
DIAPH1
DRAP1
C11orf68
PUS7
RINT1
POGZ
INO80C
ANKRD18B
MNAT1
KBTBD6
CCNC
TEX46
KDM1A
IQSEC3
INTS1
CHD1L
PRKAB2
COX16
IL21R
KCNMA1
TESK1
RAP1GAP
SRFBP1
SH3GL1
CHAF1A
AVEN
CCND1
CPLX2
ZBTB45
SLC27A5
ALG10
MTERF1
SCGB1C2
SCGB1C1
ODF3
EDC4
ODC1
ZMPSTE24
FZD1
MUS81
CFL1
ZSCAN25
PRKCE
DUSP7
SEC16B
AURKAIP1
COG2
TPR
ODR4
TRIB1
RBM45
PDE11A
TUBB1
ZNF827
STAT1
TTC4
FAM227B
DTWD1
SLC25A51
RPS8
RACK1
GMEB2
RILP
DPH7
INTS5
GANAB
UFSP1
ACHE
SERPINA3
RGPD2
RGPD1
PRADC1
CCT7
C10orf88
RPL26
KRBA2
UQCC1
KNL1
CASC3
B3GNT7
ANP32E
UCN2
PFKFB4
PRRG2
NOSIP
LRRC37A3
ADAMTS9
CT45A7
CT45A6
CT45A3
SLC33A1
GOSR1
PSMD6
ATXN2
ZSCAN10
ZNF205
TRPC4AP
MUC3A
OTUD7B
CSNK1D
LOC283710
PIP5KL1
DPM2
NOC3L
NOB1
METTL15
KIF18A
HEXIM2
ZNF789
ATP5MF-PTCD1
ATP5MF
MACC1
KMT2D
RHEBL1
CDC73
SDC4
TTC33
POLDIP3
CCDC86
H4C3
H1-6
TRIM65
MRPL38
THAP5
DNAJB9
WWOX
SRA1
SLC35A4
APBB3
EIF4EBP3
RNF10
COQ5
NFATC2
DUS1L
FAM133B
RRN3
BHLHE40
SH2B3
TMEM238
TMEM190
RPL28
MTAP
H1-0
GCAT
ETV1
DHX8
GTF2I
GRAP2
TIGD1
EIF4E2
CPPED1
ZNF106
SNAP23
RPS6KA1
SRSF6
ILVBL
ZNF253
BANP
ORMDL3
GSDMB
RUVBL1
ZC3HC1
SLC35A3
CHI3L2
LGI4
FXYD7
FXYD1
MED23
NEK8
RPL23A
TLCD1
RAB34
PROCA1
BOD1L1
PTPN6
C12orf57
TUT1
MTA2
VMO1
PSMB6
GLTPD2
NCOA3
PPP4R3B
RFXANK
BORCS8-MEF2B
BORCS8
ZBTB37
RCC1
NSUN4
MTHFS
WWTR1
RAB13
RPS27
ATF6
MRPL58
BICD1
SNTB1
SOX10
C3orf49
TTI2
ANKRD40
DUS2
DPEP2NB
DDX28
RCC1L
TAF1C
ADAD2
PTPRH
BAGE
BAGE5
BAGE4
BAGE3
ZNF554
MRPS14
ZNF830
CCT6B
BRD2
RPL11
NBPF1
SLC23A3
NHEJ1
EXTL1
PLD4
TMEM40
H2AX
DPAGT1
RPS14
HMBS
LSM8
TP53BP2
ZSCAN22
RPL29
RPS3A
SUPT5H
RPS16
ITGB3BP
EFCAB7
FRG1
FXYD3
LRRC37B
FAM90A1
C7orf61
TRIM60
SNRPE
NMNAT1
LZIC
RPL13
TEX9
RFX7
TNFSF14
USP2
INPP5F
CFAP298-TCP10L
CFAP298
FUS
REX1BD
DDX19B
AARS1
ARID1A
NREP
RNF216
NEK6
SPIN2B
EXD2
TMEM167B
SNX19
LDAH
AP4E1
CCDC88A
RPL7
RDH10
HOOK2
NAA20
TAF13
H2BC8
H2AC8
PCOLCE
MOSPD3
AK3
GPR176
CFAP20DC
CALR3
C19orf44
UNKL
C16orf91
WNK1
TRIM48
TRA2B
PKM
CAAP1
PARP4
ZNF708
EMC3
YJU2
SEC13
NUPR2
CHCHD2
MFF
SDHAF3
SLC26A2
RFX3
KCTD3
ABHD12
SRGAP2C
SRGAP2B
TRAF1
MYBPC3
ZC3H10
RPL41
SART1
ZER1
THOC5
EIF4A2
ANAPC5
HNRNPA1L2
NBN
MBTPS2
RAF1
TENT4A
CYP2E1
PDE6D
COPS7B
LMNA
TBL1X
PBK
NDRG1
CCN5
ZCCHC4
OSBPL11
C8orf33
TARBP2
MAP3K12
LRRC59
MRPL48
AARS2
HNRNPH1
WBP1
INO80B
SCAMP3
FAM189B
MRM3
GLOD4
TRIM46
KRTCAP2
ITPKC
COQ8B
CERS2
ANXA9
RBM14-RBM4
RBM14
MKRN1
TFAP2B
DNLZ
CARD9
GPSM1
SPDYE14
SPDYE10P
VPS72
PIP5K1A
SYT5
BCL3
POLR3B
LSM5
AVL9
RMDN2
NFE2L2
H3C10
H2BC13
H2AC13
PPP1R1B
LYPLAL1
PLEKHG5
FAM228B
TP53I3
SF3B6
RPS11
RPL13A
MRPL39
SURF2
SURF1
RPL7A
MED22
WASHC5
NSMCE2
ZNF791
ZNF490
LDHA
ABR
SLC36A1
EPHA3
MTR
POLR2J
FANCD2
ERMARD
VPS33A
GLIPR1L1
CAPS2
PCOTH
MIPEP
C1QTNF9B
B4GALNT3
ANKH
STEAP1B
TMEM115
NPRL2
CYB561D2
SEC61A1
CWC25
VPS45
NDUFAF5
ESF1
MRPL40
HIRA
UQCC3
LBHD1
LAMTOR5
RANBP6
KIAA2026
ZNF564
C16orf72
COIL
CSKMT
C11orf98
MARCHF7
RFFL
ZNF443
DEF8
CFAP45
VIM
SCNN1A
LTBR
HOXB3
HOXB5
HOXB4
CDCA3
UTP3
DNM1L
POLR2J3
SMG8
EPHB4
H4C9
H2BC12
H2AC12
CDC16
GTF2IRD2
MTX2
GTF2IRD2B
RNF213
MEOX2
ZNF56
HPS6
ARMH3
REXO4
ADAMTS13
ZNF358
MCOLN1
LIG4
ABHD13
CRB1
APH1B
NT5DC4
ZNF45
TOMM20
TAF5
H3C8
H2BC10
VWA1
ALLC
LTBP1
TMEM88B
ART4
CARD17
PKIG
ZBTB40
YBX3
LONP2
ABCC11
PARP2
CCNB1IP1
SERINC3
EML2
MBNL2
LOC100509620
PSMB4
SURF6
TTC26
STMP1
TPK1
RBM17
DCUN1D5
USP4
STN1
MAPRE2
PNPO
COL16A1
ACTBL2
CDH19
BOD1
LTA4H
FBXO38
ZNF581
ZNF580
NACA
TUBA1C
TOMM34
STK4
RBM39
RPL5
BBS1
ELAVL3
KDSR
LRP6
PLPP4
ZNF337
WIZ
POLG
ELOB
CHD1
CALM2
PRSS33
ZNF76
CEP120
ATAD2B
KDM6B
SH3TC2
NHLH1
UNK
H3-3B
TARS2
TAF3
ID1
MCL1
FAM78B
TIMMDC1
SAMD10
PRPF6
PSMB3
PCGF2
RPS21
HEMK1
C3orf18
UBXN1
KMT2E
POLG2
DDX5
CEP95
EPB41
IL6R
TMCC2
RASA3
IPP
ZNF561
TAGLN2
TMEM170A
SRSF5
XKR7
CACNB2
PLA2G4C
MYPN
IDH3B
DCAF8
H4C8
DHX9
FCRLB
PHLDA3
FAM187A
EFTUD2
CCDC103
COMMD1
CCT4
GRPEL2
CTNNB1
H2BC11
H2AC11
NAXE
GPATCH4
H4C1
SACM1L
MLEC
H3C1
H1-1
SPRED2
PEX2
COA1
RNF6
MPG
RHBDF1
TJP2
PRNP
GFAP
RBSN
SNRPD1
G6PC3
LSM12
BUD13
PPP2CB
MANSC1
BORCS5
CAPRIN2
IQSEC1
IFT46
ARCN1
ABCA1
APP
ARGLU1
PTPN13
BCL2A1
CLDN6
TNFRSF12A
THOC6
HCFC1R1
CBX5
HNRNPA1
WASHC2C
GTPBP3
ANO8
KIAA0895
CLDN9
MAGEA2B
MAGEA2
CSAG3
CCDC90B
GFM2
DNM2
ACOX3
TRMT44
EIF2B3
CEP164
ERMP1
NANOS3
ATP5F1E
OPN3
CHML
DYNLL1
GFOD2
PDE8A
INTS2
SRSF9
BACE1
ABCA10
SLC35E1
MTERF4
THOC3
DIDO1
GID8