ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039041 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◣ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
PSMD1
RABL2A
TAOK3
SUDS3
POLR3F
DZANK1
DYNC1LI2
PSMG2
CEP76
MAPKAPK5
NME6
CACTIN
IPO13
NVL
ZNF503
FRG2C
TBCK
AIMP1
RWDD1
HADHB
HADHA
RPL21
NCLN
VTI1B
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
NSUN2
ID2
SLC35B1
NUP205
POLR2E
STAM
HSPA9
EXOSC5
BCKDHA
TSNAX
MRPS7
GGA3
HOXA2
REXO1
STAM2
DCTN1
VDAC2
UPF2
SKP1
LYRM4
FARS2
ATP5MG
GOLGA5
SMC2
BBS9
COMMD1
CCT4
FARSB
C19orf48
SUPV3L1
PAK1IP1
C6orf52
GOSR2
PSMD12
BLCAP
RPS23
ATP6AP1L
IGFBP6
SOAT2
DPH6
VARS1
DAPL1
PES1
NDUFA4
SEC61B
ZNF576
IRGQ
TTC8
ZRANB2
TSN
SELENOF
HS2ST1
PDE6B
TMED1
MRPS5
PNO1
TM9SF1
DUX4
COX7A2L
PKDCC
RBKS
BABAM2
EIF4ENIF1
ANAPC7
USP1
IQCG
RPL35A
RBBP5
RARB
LYPD1
CAPRIN1
PI4KB
SART3
ISCU
ICE1
MRPL11
PDAP1
BUD31
RABGGTB
RPS27A
CLHC1
ADK
AP3M1
FAM104A
C17orf80
PROSER1
NHLRC3
FRG2
XPNPEP3
ST13
DNAJB7
ACTR10
PDE12
RBPJ
CDC42EP3
SYBU
MOBP
ZFHX3
OSGEP
APEX1
LTBR
SCNN1A
NEO1
RPS12
SLC22A2
LRRN4
APOM
BAG6
UFM1
CBX4
C12orf29
PTK2B
ZNF608
CLGN
PCBP1
PTGES2
NR2F1
CREB5
NSUN6
ARL5B
CCDC200
PAF1
MED29
CYP26A1
VANGL2
CITED2
SF3B3
COG4
DIAPH3
RBMS3
GABRB2
LAMA3
EIF2S3
FOXP2
ST18
TLE2
METTL24
PXDNL
ZGPAT
ARFRP1
HEXIM2
MRTO4
EMC1
HBB
GADD45GIP1
PIN4
MBD2
ARHGEF38
ZNF407
SIRT4
NFKBIL1
DDX39B
ATP6V1G2
SUCLG1
GATA4
SLC30A4
OR6B2
NDUFA10
MSX2
BARHL2
TTI2
TPM1
MYRIP
CXXC4
POP5
HOXA3
CABIN1
BANP
ARHGAP11A-SCG5
ARHGAP11A
HMX2
LAMB1
SEMA3E
TMEM106B
SHOX2
RSRC1
SCMH1
HEY2
CNR1
HMGCS2
TMEM107
KAT6B
TBX2
MET
BNIP3
USP44
RARA
ARHGEF10L
RPS29
LRR1
CDS1
OAZ3
HES1
MKRN2OS
MKRN2
PRUNE2
PDHX
APIP
CACYBP
STK36
RNF25
SMAGP
ZNF746
SEC11C
SPAG17
ZFHX4
KDM3A
ST7
RPN1
SHMT2
RPL7
RDH10
FOXP1
EIF3D
LIN28A
CDC73
DMBX1
TYRO3
HOXA4
TBC1D9
CNPY2
SYNJ2
METTL25
CCDC59
PDE4DIP
TMC7
ZBTB25
ZBTB1
GFRA1
ZNF383
TXNRD1
TMEM70
ELOC
SCML4
SPRY1
TAF9
RAD17
AK6
NDUFS7
CBWD5
CBWD3
CBWD6
CLNK
CCDC174
FMN1
RPS24
POLR3A
ACOT2
OSGIN2
TNK2
TRIP10
GPR108
SLC25A53
FREM2
SPIN1
DAOA
PCBD2
REC8
ZNF367
GTF3C4
DDX31
LARGE1
TSHZ1
NDUFB3
FAM126B
ABLIM3
TCF7
HOXA1
FRRS1
RABGAP1L
ABI2
AGO1
USP17L20
USP17L22
RPS10-NUDT3
RPS10
USP17L11
USP17L18
USP17L21
USP17L12
CCN1
PCDH15
LYPD6B
EPM2A
IL20
CCDC33
GORAB
GTDC1
LYN
TBX3
CFAP69
WDR74
SNCG
MMRN2
KRT8
KRT18
ZNF827
PDZRN3
TCF4
MGP
MTRNR2L1
SKIL
ADAM18
OTUD7B
ESRRG
TNFRSF19
ANTKMT
METRN
ANK3
ITGAV
KDM2B
MYZAP
GCOM1
RUNX1T1
PKIG
ABCB4
ALKBH5
MGST1
ARSF
KRTAP23-1
CPE
GOLIM4
SLITRK6
ATOH1
HOXB1
FGD3
ZNF507
RGS8
STX19
EMX2
CS
RARG
ZNF395
GEMIN2
RBM20
SCAMP2
GPSM3
EOMES
PBX2
TMPRSS11F
ETFBKMT
ATXN2
EYA1
TMEM9
YTHDF2
SYNJ2BP-COX16
SYNJ2BP
MECOM
CSNK1A1
C1orf105
C6orf163
IPMK
CISD1
DCTN3
ARID3C
CLCN3
BCAT2
IGF2BP3
POU2F1
IL17B
BEND7
SPCS1
GLT8D1
SERTAD2
ACKR3
NDST3
USP34
GGA1
NLGN1
LRRTM4
SLC19A3
ASXL3
GBX1
SIGLEC15
ARAP2
MRPL34
ABHD8
ID1
HOXC4
HOXC6
NXPH4
SNX16
TACC1
PDCL3
C16orf91
SNX1
CIAO2A
PRR13
VPS33B
ERP27
KDM6B
MEOX1
IFI16
COL23A1
DMAC1
UBE2I
USP17L15
HAPLN1
NEFH
INKA2
PRKD1
DIO2
CEP70
LIX1
ELOVL6
RASSF6
SMIM32
HUS1
PEX14
DFFA
ITGB8
IMMP1L
ELP4
BFSP1
SLC6A4
ADM
RPP25
THRA
LOC389199
AFAP1
KAT6A
TMSB4Y
DUSP9
ATXN1L
DENR
SLC25A6
SLC35F2
SALL3
DONSON
DHRS3
SRSF11
LRRC40
PDE4D
PXYLP1
TIGD1
EIF4E2
SEMA6D
KCNN2
HNRNPA2B1
CBX3
NCBP3
SEPTIN2
HDLBP
B3GNT5
JAKMIP1
MYLK3
PDHB
UXS1
MEIS2
CNTN4
ID3
SLC35E3
GADD45A
NTAN1
C2CD5
UBL4B
LMO4
TRIP4
CRABP2
USP17L19
TLE4
SOX5
TLE3
LBR
GJA10
HSPA4L
H2BC5
H1-4
TSPAN3
MCU
SELENOS
MEGF6
HSPA1B
RAI14
RCOR3
SPATC1L
NEUROG1
LMO1
RIMS1
SH2B1
SEH1L
CTF1
BCL7C
SAR1B
SLC22A5
ANXA11
RNF207
MGST2
DLAT
KANK1
TMPPE
GLB1
EBAG9
ACOT1
PKN2
HNRNPD
NR2C1
CALM2
SORBS2
CHRNA9
CABCOCO1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SHB
ZBED9
SUSD4
SLC7A7
LYPD6
MFSD4A
ERICH5
AP3D1
POGLUT3
COLEC12
MSS51
TPRA1
PRDM10
AKIRIN1
HIP1
AKAP9
GPRC5A
OTOL1
KLRC3
GOLM2
ADAMTSL4
CLDN9
DERA
TNFRSF12A
CLDN6
LHFPL2
MELTF
PRKAG2
GPC3
PRTG
GRHL2
PYDC5
APLN
PHIP
DIP2C
KMT2A
STK38
YAP1
SOX6
FAAP24
CEP89
OR51T1
SPATA25
CTSA
NEURL2
OTUD4
BCAP29
SSBP2
TRIM55
ADH1C
TCHP
STOM
PCLO
JMJD1C
HPDL
CRHR2
CALCRL
SULF1
LPCAT3
SLAMF8
BNC2
TAF1A
HECTD4
SOX14
SMARCD2
SLC35E2A
UBA3
ARL6IP5
ELAPOR2
FDFT1
TMTC3
CEP290
TMPRSS12
KANSL3
FER1L5
MACROH2A1
SLC48A1
SFRP2
POLR2J3
COX5A
CPVL
CHN2
RCOR1
PANK2
PRIM1
ZSCAN30
ACY3
GPR37
C9orf92
CMTR1
TFAP2B
HOXB13
NR2C2
RNF111
ETV1
MEIS1
REL
EID2
NSUN7
NANOGP8
DYNLT1
DLG2
LY6G5C
RNASE9
RYR2
TRIM16L
ACYP1
ZC2HC1C
ZKSCAN2
SSRP1
P2RX3
STATH
GCG
URGCP
CCDC102A
URGCP-MRPS24
MINDY2
SECISBP2L
ZBTB7C
WDR26
RILPL1
EML5
ADAM28
PRXL2A
AP1B1
JCAD
ARSB
MACF1
NAGLU
PEX2
TRIM24
FMO1
EIF4H
QPRT
RBP2
FNDC5
IQSEC2
MRGBP
ZDHHC17
BRWD1
MYADM
POFUT2
GIGYF1
KCNS3
MPDZ
NFE2
ZBTB17
UFSP1
ACHE
PARP9
DTX3L
NEUROG2
UQCC2
FGD5
SALL4
UBE2V2
GAB2
POF1B
BNIP2
CLK1
SFXN3
PDZD7
IQCB1
EAF2
TUBB
ING1
ADGRL2
MDC1
EHF
NCOA7
ATXN7
SKAP2
MYO6
GBP1
PALLD
ZNF385B
MTF2
GTF2H5
DNAJA2
CDK6
PNN
PRKRA
PJVK
TRAPPC6B
PPARGC1A
CD74
CADPS
DZIP3
CIP2A
BZW2
OTX2
ACBD6
CABLES1
PKD2L2
PLIN2
RGS2
CSDC2
SH3PXD2A
DSC2
ZNF341
TLN1
CREB3
BAZ2B
MIGA1
CD55
NNMT
VEPH1
CTNNA1
SLC5A10
PCTP
MRPS28
CMTR2
FSIP1
SPAG8
HINT2
CMSS1
FILIP1L
ROR2
SDR39U1
PLEKHD1
SLC7A2
RBM7
C11orf71
CEP295
TBC1D32
ADAMTS3
IDH1
CNOT10
SCOC
ZASP
SAP25
GJA1
UBB
EXPH5
RAD18
NUP93
KCNK2
NAT1
NOX3
CATSPERG
MRPS31
DNMBP
ZNF629
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SOD2
WTAP
PCNX4
REV1
TK2
CKLF-CMTM1
CKLF
DNAJB5
SKIV2L
NELFE
CLTC
NANP
CENPS-CORT
CENPS
RPL5
DNAH12
BTG1
IMMP2L
GATA3
FLVCR1
CAMK2G
TMEM205
CCDC159
CENPBD1
IFT22
TANC2
NDNF
PTGES3
ZNF3
BAG3
PHACTR2
ACP4
LOC105372440
SLC6A12
GRAMD2B
NELFA
SPTBN1
SRI
BAG2
CSF3R
ARL14EP
NIPSNAP2
TLX3
FZD8
RXRB
THUMPD3
NAA40
SEMA4B
PPP1R3D
FAM217B
COL11A2
RHOBTB1
MCF2
P3H2
LSMEM1
FAM110A
NTNG2
TNPO3
ELOA
REM2
HAND1
H3-3A
NRDE2
JAK1
MPPED2
CTH
CFAP20
UNC93A
CRADD
HEBP2
FABP5
ROBO3
GPC6
TBC1D8B
CDKL2
LOC100287896
LIPT2
WDR81
CDK14
ILF3
BATF2
RND3
TPCN1
TRIP12
FBXO36
ASAH1
TEX14
ZFAT
TRPM7
B4GALT3
HELT
LRP6
MDM2
PXMP2
POLE
C6orf62
ZSCAN25
CHD7
SASH1
MYBPC3
NXPH2
TAS2R8
RPS3A
SLC30A9
NADSYN1
DHCR7
TAS2R7
ABCA4
PKP2
TRAP1
IRS2
SMDT1
PHETA2
NAGA
TM9SF3
EDNRB
CYP51A1
PGK1
TSPAN4
POLR2L
DMD
RAN
MTCH2
CDKN2AIP
MANEA
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
IRX5
SERPINB6
NPNT
DPEP3
CREG1
FSTL5
GTF2IRD2
GTF2IRD2B
MICU2
GRWD1
P2RX4
NR2F6
KIAA2012
ARHGEF12
BCAT1
OR6X1
MARK1
TBC1D8
SMIM20
SPPL2A
CHD8
INTS10
TBC1D5
NEK2
MMAA
CCN2
PSMA7
USP12
EEF1E1
KRTAP19-1
ATP9A
ARID3B
CEP41
CCDC169-SOHLH2
CCDC169
OR5A2
SERPINF1
SUPT3H
ZNF391
RTRAF
COA1
FAM83F
CFAP46
LPIN1
SLC9A1
CAMLG
RTL10
GNB1L
ZFAND6
APPL2
DERL2
ZNF878
ANAPC15
STON2
PRSS22
SPDYE14
SPDYE10P
CASTOR2
C15orf61
KIF5B
LYRM9
TBC1D1
ATF6
CNOT2
SLC11A2
TTK
LSM8
OPA1
BAMBI
NFIB
TSACC
CCT3
KRTAP3-1
MED27
ELMOD1
LNPEP
SHOC2
BBIP1
DCLK1
CTXN2
IGFBP2
NRG2
POLR2D