ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPG7
IER3
FLOT1
PLCB2
NADK
NFE2
INAVA
PRAM1
LAPTM5
NCOA2
HMGCS1
PPCDC
ZNF414
SKIL
ARHGAP4
UNC13D
MTRNR2L2
MSH3
DHFR
ANKMY1
RNPEPL1
GRAP
CD38
GRAPL
LCOR
C5AR2
RNF166
STX1A
GFOD1
NIBAN3
CXXC5
CBX4
CCL2
MEF2D
HSH2D
MYRF
DHRS3
GRK6
SPATA1
GNG5
FARSA
CALR
MTRNR2L8
MIDN
PCNA
CDS2
ARHGAP45
DLG1
RASGRP2
SQSTM1
DZIP3
CIP2A
PDE4B
MBD6
DDIT3
CSF3R
MAP2K3
FGR
INSIG1
COX20
ARID3B
MYO1G
MYO1F
CSK
IDH1
UPF3A
SIRPA
ARIH2
RPS6KA1
P2RY2
DBP
TPPP3
KIF21B
DOT1L
CENPH
CCDC88B
WDR74
ZNF718
ZNF595
FMNL1
ZCCHC24
ZC3H12A
NFKBIA
KRI1
CDKN2D
ASB2
NRL
DCAF11
FDFT1
FDPS
MKLN1
TRERF1
S100P
NFIC
KAT6B
OLIG1
ATP8B4
SSH3
MRAS
NLRP3
LYL1
ARHGEF2
TOX2
ICAM1
BAZ1B
PRKCD
SULT2B1
DENND4B
PITPNM2
RASSF2
MYEOV
C16orf54
SLC25A19
LIMK1
BBC3
BCL3
RBM15
GPAA1
EXOSC4
SYTL1
RAB11FIP3
DRAP1
C11orf68
CD300A
C11orf91
KAZALD1
ARHGEF18
DNAJB1
MSMO1
KRAS
PSMD3
PKN1
POC1B-GALNT4
POC1B
GALNT4
EMP3
CCDC114
TMC6
TMC8
KEAP1
LRPAP1
ZNF740
CSAD
CD248
SHISAL2A
SEC14L1
SNX15
FADS3
ATG16L2
S1PR2
RARG
RAB3D
CTBP2
GHDC
CCDC57
RUNX1
TMEM104
NAT9
SRGAP2C
SRGAP2B
CEBPE
LYST
INAFM2
CYBA
PRTN3
BHLHE40
MRPS31
RAB11FIP1
EMILIN2
BIN2
NUP210L
HUS1
SMARCD2
ARID2
SREBF1
MCRIP2
ADGRG5
RNASEH2B
NDUFA4
EPM2A
PIK3AP1
SPATA25
CTSA
PACC1
ZSWIM1
TBL1XR1
AGTRAP
VSIR
PDE12
TRIB1
LRMDA
GALNT9
HES1
PDE6B
SMIM20
HMGCR
RAC2
CDCA7L
NPEPL1
CLEC3B
EVL
LGALS1
DUSP10
SLC47A1
TCTEX1D4
BTBD19
SLC35D1
PKM
E2F3
GRK2
PTPRCAP
LTB
LST1
H4C11
SLC22A18
NOL4L
P2RX5
ACTL9
PMF1-BGLAP
PMF1
GSE1
FERMT3
LHX3
SETD1B
CFD
YARS1
S100PBP
UBE2E1
MTRF1L
AP2S1
H6PD
NR2C1
IMPDH1
TM4SF19
ARRB1
PLAU
KRT8
AP5B1
CYP51A1
RAP1GAP2
GYPC
SPDYE13
IGSF10
CITED4
SPRED2
EVA1B
ALOX5AP
AHNAK
FCGRT
MAMSTR
ANKRD13D
ASB1
TNFRSF4
TNFRSF18
MGAT4B
SH2B1
CCDC174
TRIM8
SCUBE1
MAP1S
MID1IP1
ZNRD2
FAM89B
EHBP1L1
MYBPH
OAZ1
HSP90AB1
PLIN2
LMTK3
JUP
TRIB3
HIVEP1
RAB37
TANK
SQLE
IGFBP6
SOAT2
GPCPD1
ADGRG3
RBBP5
ANP32E
NCF1
DUS1L
SMCHD1
NINJ2
SLC9A3R1
GMEB2
ZNF746
UPP1
USP3
PARP15
MXI1
GBE1
RHOF
HECTD3
MLXIPL
PECAM1
TYROBP
ARL4A
IFNGR1
CD1D
IGF2BP3
NUFIP2
PKN2
STRA6
ATF3
MTRNR2L1
WDR43
ZASP
SAP25
ADPRHL1
PDP2
MAP3K8
H4C14
H4C15
TPRA1
PPP1R27
MCRIP1
PWWP2B
PIKFYVE
GPR132
AGRP
ETFBKMT
SMG6
TAGLN2
C12orf75
SLC12A6
RCAN1
MSRB1
RNF103-CHMP3
RMND5A
PEAK3
PLEK
UMODL1
SLC51A
CTTN
TBC1D10C
PPP1CA
PIK3CD
SLC16A3
SLC1A5
NFIL3
DENND2D
TSPAN16
GRIFIN
PPP2R5B
TLR9
SIPA1
RHBDF1
MPG
CTDSP1
GPR160
ICAM3
GTF3A
CPSF4L
GPR146
C3orf86
TBXA2R
SH3BP2
CA11
SELPLG
RARB
MINDY2
CDK13
SH2B2
ADAP1
ADRM1
KLF16
PDE8A
PLEKHO2
GMIP
SEPTIN9
ZC3H4
S1PR4
DENND6A
LDLR
GLIPR1L1
CAPS2
H4C9
SNX33
DSCAML1
SH2B3
S100A2
OPA1
TRAPPC5
MCEMP1
NKIRAS1
NR1D2
ATXN7L2
TCF3
BCAP31
ABCD1
RCOR2
UBALD2
BAZ2A
LRPPRC
GFI1
PDCD4
ARID3A
AXDND1
CLIC1
DDAH2
PCYT1A
MTRNR2L9
SCD
IQGAP2
CTCF
ZNF217
ATP2A3
FOXK1
LOC388282
EFHD2
TMEM101
FBXO41
ACACA
KCNAB2
TXNRD1
CD82
TSPAN32
C11orf21
PPARG
PCNX3
MAP3K11
P2RX1
WNT10B
GPATCH8
UBC
SLC17A9
TREM1
TRPM2
MVK
POM121C
PPIAL4H
PPIAL4C
PPIAL4A
CCDC154
NAMPT
KCNIP1
STEAP3
RBKS
BABAM2
PPP1R18
CDK9
KLHL24
MYADM
CLTC
PHF19
MRGBP
NCOA4
FOS
KBTBD2
HRH1
FGGY
RGPD2
RGPD1
CBFA2T3
NDRG2
ARHGEF40
ZDHHC17
RAPGEF1
AVPR2
ATP13A2
PDLIM7
DIO1
LY6K
MICAL1
CHPT1
IRF2BP1
MTHFR
CLCN6
CCDC9
LZTS2
ZNF276
VPS9D1
PRNP
TMEM143
SYNGR4
VPS72
EIF4A3
VOPP1
UBE2J1
PLEKHA8
FKBP14
TAC4
ITGB2
C1QTNF4
DUSP7
TRIM11
ZGPAT
ARFRP1
EPN1
PMPCB
ICAM5
ICAM4
TAF1A
PTCD1
CPSF4
MPO
BPI
C16orf74
LONRF3
OGFOD2
PTPN6
ATR
TBC1D14
COPS7A
QPRT
HBP1
H4C13
H3C11
B3GNTL1
LINGO1
PPIAL4G
MTF2
TEX2
MFAP4
C19orf53
ANK1
NOG
ZSWIM9
LIG1
GALNT7
LPCAT3
NUDT15
ZFP36
PLEKHG2
ADM
STK35
STK3
RHOH
TFAP2A
HSPH1
FSCN1
VIPR2
OSR2
AMY2A
GOLIM4
ZNF584
OAF
LIMD2
KMT2D
CAMP
CPQ
SLC9A5
FHOD1
PPRC1
QRICH1
HIP1
CPXM1
PIP4P2
ITPRIP
FRA10AC1
PLEKHA2
MRPS15
NFAM1
TNFRSF10A
RASIP1
IZUMO1
H4C4
KANSL3
FER1L5
TNFRSF1B
SRF
ZNF846
BORCS7
CPNE5
PTEN
KLLN
DOCK2
MYO18A
LZTFL1
SPN
MAPK12
NTSR1
RNF149
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DGKZ
FKBP5
NEURL2
LRRK2
METTL25
CCDC59
BANP
SKIDA1
TCAP
PNMT
RIOK3
SP1
FRAT1
NIT2
EP400
GTF2IRD1
MIDEAS
DYRK1A
LMNA
TCIRG1
BRI3BP
EPS15
TTYH3
HOXA3
GPX4
SNUPN
NR4A3
MAFG
CACNA2D4
HSP90AA1
CDCA4
PFKFB4
C3
UCN2
PPIAL4F
PPIAL4E
PPIAL4D
ZNF76
ZDHHC4
TNFSF14
TMEM88
NAA38
CYB5D1
LSG1
PLXNB2
NFIA
FTL
ATXN2
AFF1
SC5D
CUL2
TXNDC5
KCNE1
DRC7
DUSP6
IFRD2
DMAP1
UCP2
KLF10
MIEF1
NLRC3
C5AR1
NDUFS7
ING1
UBR4
MAP1LC3B2
FAM214B
TMIGD3
ADORA3
DHX33
NYX
FCRLB
VDR
HAPLN4
APBB1IP
UHRF2
YWHAQ
H4C12
FBXO6
PIM3
SULT6B1
XCR1
LTA4H
ATP11A
BCKDK
SPRING1
RNFT2
UNC45A
HDDC3
ITGAL
PEX5
C15orf62
RDH12
RDH11
SBF1
PLEKHM1
INTS1
GDPGP1
CIB1
INPPL1
RWDD1
CNOT2
NUBP1
SH3BGRL3
EVPLL
TM7SF3
GFM2
SREK1IP1
CWC27
STING1
CHD9
TBP
PSMB1
HSD17B7
ENO1
CLIC4
CCNL1
POLG
AHCYL2
ZYX
FAM131B
TMBIM6
CDC42EP4
SASH3
MFN2
DNAJB2
NOTCH1
TP53I11
RAB43
SIGLEC7
RBPJ
KMT5A
MLEC
BCAT1
ZNF317
PRSS57
SMAD3
ARHGAP27
TBL2
SCAP
TPD52L2
ABHD16B
KDM3B
SIK1B
SIK1
TRIM14
ZNF750
NKG7
CLDND2
SLC39A11
CYTH3
TNFAIP2
SAT1
MAPK8
SLC25A15
ADAM8
DYNC1I2
FGD3
HMGN4
B2M
DNAJB12
VGLL4
KLF1
OGA
GCDH
MRPL24
FCN1
ERLIN2
HPCAL1
EIF3G
FZD5
COMMD4
PGLS
RAD54L2
MRPS23
THEM4
FBRSL1
FOXP1
VAV1
PSMF1
ALDH3B1
PTPN7
ZNF121
MTRNR2L10
SETDB1
OTUD7B
MAD1L1
SCAMP4
ADAT3
RFFL
PGPEP1
SUCNR1
PEX14
DFFA
SLC35E2B
CYB5R4
ZFAND3
MDM2
LFNG
NCOA7
ANKRD33B
PARP2
ARPC1B
DAGLB
LBR
SCGB1C2
SCGB1C1
PPP1R1B
PRDM10
PTP4A2
PHETA1
CCL3
ZNF350
DUSP11
C2orf78
KMT2E
RNF139
WDR18
RPL22
CXCR3
OSM
CRACR2B
PHLDB1
DLGAP4
PSMD1
TMEM41B
THAP11
NUTF2
CENPT
PHC2
NYAP1
GIT2
ANKRD13A
EIF1AD
BANF1
GGPS1
ARID4B
APOM
BAG6
STX18
SLC25A18
MTMR4
PA2G4
MFSD8
ABHD18
SYT7
PLD6
IPO4
CDC42EP3
NOTCH2
LSM5
AVL9
EHD1
CD63
RBM7
C11orf71
PPP1R15A
SH3RF3
PNO1
GUSB
TRIP4
UGP2
VAT1
RND2
FBXO46
RAB20
C7orf26
NTN3
ANPEP
SUSD1
EMC8
COX4I1
ST3GAL2
RIPK1
SH2D3A
RGS12
LNPEP
NMNAT1
LZIC
LRCH4
FBXO24
THRA
GLUL
STRIP1
TRIM38
LCP2
CFLAR
RASA3
RASSF4
ARL6IP4
ATP5MF-PTCD1
ATP5MF
DGKD
CLDN12
EXOC2
GTF2I
PHF12
GBA
GHRL
ARL8A
ZNF503
ERCC1
POU2F2
TES
ANAPC5
U2SURP
RNF130
ZNF775
NDRG1
SIDT2
DENND5B
NBAS
WT1
USP36
ARL5C
PRELID3B
BSDC1
UNC45B
TOM1
SATB2
RRP12
TRIOBP
RHEX
PGD
AZIN1
EEA1
PDPR
SEMA4C
SYK
TMEM167B
TMEM72
KLF2
COL9A2
CAST
GLIS3
DOK7
RCOR3
CSF1R
SLC25A39
SIRPB2
ABT1
INHBE
LGALS9B
SEPTIN2
HDLBP
FURIN
ZFP91
LPXN
CCDC130
ETV6
ZNF609
VWA1
RBP4
PROSER1
NHLRC3
RASSF5
REPIN1
ZNF862
PRXL2B
RAP2A
DYSF
USP8
HEXA
MKNK2
EPHA1
DNAJC16
CASP9
SLC25A16
ARHGEF25
FUT7
TMTC3
CEP290
KDELR1
GRIN2D
MEF2B
CCDC146
LPAR2
GPNMB
CSRNP1
SCAF1
RRAS
PPFIBP2
ZNF652
NEK2
SKA1
GTF2B
GAS7
SF3A3
ZNF577
MFSD10
PPP3CB
FAAP24
CEP89
LONP2
ABCC11
NUF2
PEMT
HMX3
ARSG
SLC16A6
PRCC
IL1R1
QPCT
DDX23
ARMC12
DRG2
NTNG2
HELZ
GPR35
WASHC2A
SLC41A3
TFAM
EBAG9
POM121
UNCX
DOK3
ANKRD33
CCR5
SLC22A15
C11orf24
NDUFAF3
DALRD3