ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4023330 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◣ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

SPATC1L
FBH1
ANKRD16
HIBADH
SP2
PKNOX1
ACAP2
SESN1
RFX1
RAB5B
KDM4B
DNM2
NLK
WDR97
MAF1
ZSWIM3
ACOT8
FLAD1
G3BP1
GTPBP6
CYTH2
KAT6B
SP1
TMEM60
PHTF2
ZNF687
ZNF595
FRMD5
MRTFA
ZBTB32
ANKHD1-EIF4EBP3
ANKHD1
ZNF718
LYNX1-SLURP2
LYNX1
STT3A
CBX5
HNRNPA1
PLAG1
CHCHD7
UBE2J2
DCAF7
ATP5F1B
FRG2C
JUP
SUFU
ACTR1A
RBM27
TRAF2
HIP1
ZNF141
CGGBP1
ZNF654
AK2
RHPN1
CIC
OSBP
GATAD2A
EVI5L
SLC25A25
NAIF1
PANK2
OSBPL2
LRCH4
FBXO24
H2AZ2
FRG2
ZMYM5
TLE3
OGDH
DCTN4
RAB40C
PPIA
AKTIP
ATG9A
ANKZF1
HTT
NFE2L1
ABHD2
TUBB4B
TMEM45A
PWWP2A
NFATC2IP
ETV5
EIF4A1
HSPA2
FKBP5
RPLP0
PABPN1
KHSRP
RAB11B
CTTNBP2NL
ENSA
MSANTD4
BCL2L1
STK17A
PXMP4
SAP30L
NCOA2
CHD6
MAP3K3
HBP1
ELMO2
ZNF564
C7orf50
GDI2
TMEM160
MED30
PRRC2B
STIP1
TOM1L2
DRC3
SLC26A2
CEP131
FAM126A
PRC1
MPZL1
TCERG1
WFS1
XPO1
NUMB
MEAK7
GATAD2B
EPHA7
TDRKH
SFXN5
CENPA
TMEM218
MYH10
RNF34
FRYL
TNIP1
IER5L
HNRNPC
FANCF
SCAI
ZMYM2
PODNL1
DCAF15
HLTF
MTMR12
MLLT1
RRBP1
TOP2A
TRAFD1
SPRYD3
TXNDC16
GPR137C
DNAJC14
KIF1B
FMNL3
RPL36AL
MGAT2
EIF2AK3
TEPSIN
NDUFAF8
CYB5A
RAB3A
ZSWIM1
ZNF492
JOSD1
GTPBP1
SEL1L2
MACROD2
ERCC2
HNRNPL
PHF20
YPEL2
RAB5C
TP53BP1
IGSF8
UGP2
SIPA1L2
ZSWIM4
DCUN1D4
PLCL1
IP6K1
TCF3
PNN
TRAPPC6B
PRDM11
MEF2D
KMT5C
SFXN3
PDZD7
CANX
BCAS3
EPHB3
TRIM9
CCDC61
ORC2
JPT1
IRS2
TRIM32
ASTN2
PCF11
DNAJB5
TRIM35
PTK2B
CCDC137
ERI3
FOXK2
EHBP1
KCTD7
CNNM2
ENPP5
RPN2
MROH8
PGAP2
CBLB
MYLPF
TBC1D10B
TAF7
CRLF3
ATF7-NPFF
ATF7
DAZAP2
EFNB2
MYH9
PLEKHA8
MXD4
SEPTIN9
CEBPG
SYPL1
ZSCAN32
ZNF174
SEPHS2
ACTR2
UBP1
SLC25A42
KIAA0232
KLF5
ZNF281
RAB40B
C16orf92
CDR2
ARAF
ZNF691
TLE1
ARL4A
RPUSD3
MAML1
OTULINL
PMS1
ORMDL1
MTRNR2L8
NR3C2
TSACC
CCT3
GLRX5
RPS24
POLR3A
EEA1
OSBPL3
HDGFL2
R3HDM1
ZRANB3
KIAA0513
PBX1
SP4
HESX1
APPL1
HNRNPR
GLCCI1
MTRNR2L1
ALKBH5
PODXL2
GNAZ
SPSB3
HGH1
GOLIM4
MRPL37
CYB5RL
PDXP
MPHOSPH8
IVD
PPP2R5A
PRICKLE3
MEGF9
KMT5A
SLC41A1
C12orf65
PLIN3
DIAPH3
MAST4
FAM222B
CAMTA1
SLC46A3
SMAD2
ENO1
KCTD9
CDCA2
ASPH
CDH15
PPFIBP1
RNF5
AGPAT1
ZCCHC14
ENTPD7
AKAP8
TSPAN15
UVRAG
MPRIP
BAIAP2
NR2C2
MYH14
MACO1
BPGM
ZNF555
MIEF2
FLII
KANSL1
FZD4
TOP2B
GET4
PPM1K
NXT1
FAM72C
JAKMIP1
ZC3H6
PITX3
GBF1
TRAPPC11
RWDD4
NCK1
LLGL1
RMI1
HNRNPK
DCAF4
TPCN1
IQCD
RPUSD1
CHTF18
SP3
RAPGEF2
TTBK2
STPG1
NIPAL3
VIPR1
RUVBL1
RAB39A
IFT27
RPS11
RSBN1L
GATM
SPATA5L1
MAFA
AMD1
ERAP1
TRAF7
TMCC2
HOOK1
ITFG2
EIF5
RAB8A
DUX4
LRRC56
HRAS
NUFIP2
PRMT1
ROGDI
OTX1
FOXO1
PEF1
ZFYVE21
XRCC3
NUBP1
PCNX3
MAP3K11
HNRNPAB
PAX9
SHKBP1
WBP1L
PC
MLH1
EPM2AIP1
IVNS1ABP
SSBP2
INTS3
HACL1
BTD
JPT2
RTRAF
DDX19B
AARS1
SRGAP2
FAM72A
NXPE3
GOLPH3L
ZBTB7A
NAXD
WBP1
INO80B
TRIP10
GPR108
FOXN3
EIF3L
ANKRD54
HEY1
BBX
SRGAP2B
FAM72D
ME2
N6AMT1
MDC1
TUBB
GRK6
PLEKHH2
SARNP
ORMDL2
CCNG1
PIM1
GRSF1
ORAI3
HDAC4
MARCHF3
CIT
HSPA5
ARRDC3
SLC25A19
ANP32E
PPM1B
SPAG7
LIX1L
ADRM1
COL23A1
PDPK1
YWHAZ
ZNF774
STARD3NL
KDM6A
KBTBD3
AASDHPPT
PPP3CA
PDE6D
COPS7B
ANP32A
ZNF626
FYN
RGS9BP
ANKRD27
BAHCC1
KSR2
SMARCD2
CFAP410
TIAM1
LOC150051
USP20
C9orf78
C16orf72
KAT7
OTUD5
SRP19
ACTN1
CREB3L2
PSPN
ALKBH7
PITPNM1
PCGF2
OPA3
PSKH1
TDP1
EFCAB11
ZNF443
ZNF724
TSKS
AP2A1
CCDC153
TSEN54
CASKIN2
TANGO2
ARVCF
IL6ST
GNA12
STX5
ZNF200
DNAJC27
CHCHD2
IGSF9B
SDC2
CREBRF
MIA3
INIP
PADI2
COQ7
DAPK3
SLC39A1
CRTC2
CREB3L4
PTPN13
ACYP1
PRKD2
GPR158
LMAN2
LMTK2
ESR2
ATP7B
ALG11
MTOR
TOMM40L
APOA2
C22orf39
ZNF563
IRX2
C5orf38
RGMB
AKAP5
FMN1
SLC25A28
BAZ1B
MROH1
CCNL2
GAS2L3
PDP2
CNOT3
PROSER3
HSPB6
TOM1
GLCE
SELENOO
TYW1
SBDS
TMEM53
ARMH1
AKAP13
GALNT18
F11R
ZDHHC24
ACTN3
FAM111B
GRPEL1
LINC02210-CRHR1
TNRC18
LOC100129484
ACTR1B
OXSR1
MAPK9
VPS35
ING1
ATP5F1E
UBTD1
MMS19
DPP3
NF2
FHIT
PLCG1
RNF20
DYNLRB1
PNKD
AAMP
EIF4A2
AZIN1
RALGPS1
NBR1
TMTC4
SRGAP1
ZNF211
RSPH4A
TNRC6B
PCP2
XAB2
KCNAB2
ATP6AP1
ZNF367
PSENEN
LIN37
ZNF493
UBFD1
EARS2
PDIA6
MBIP
ITSN1
CRYZL1
ABCA7
CAND1
STAT3
CCDC102A
PER2
PBX3
PGK1
SORT1
SLC39A3
HMGN1
MAPK8IP3
SPC24
GFPT1
RFX2
DRAP1
C11orf68
RTTN
SLF2
PRKACA
DHCR7
NADSYN1
COPG2
FAM228B
DUSP10
SLC4A7
PFN4
YJU2
RBM4
LTN1
LCORL
ARL17B
ARL17A
FICD
PCYOX1L
FGFR3
FKBP3
FANCM
PRSS16
PCP4L1
INPP5B
CYC1
DPY19L3
SUN2
OTUB2
ZNRF2
PACSIN2
CREB3L3
CHD8
MRPL34
ABHD8
POLD2
SCAMP2
ZBTB18
BBS12
NFIL3
BBS10
RBM15
ZBTB25
ZBTB1
DMBX1
CDC25C
FAM53C
DDX11
ZNF77
GNA11
KMT5B
ZBTB20
ANAPC15
FKBP8
SUZ12
MED7
DNAL4
USP16
NSD3
LETM2
SMARCA2
ZNF823
AP5Z1
KLHL25
MAF
CHPF2
PGD
PPP6R3
NGDN
HNRNPLL
NEMP1
TBC1D10A
GLIS1
TERT
SLC15A4
FAM174C
CPT1A
TRIM45
RRAGC
BUB3
HDAC11
STARD5
NOVA1
ZNF341
COPZ1
MAFB
ID2
AMER1
YIF1A
TMEM151A
PRKCI
KMT2A
LAMTOR4
PRDM15
TEN1
ACOX1
ZNF441
CNTN1
RPL18A
MCM3
H4-16
H2AJ
STX7
MEX3C
RAB22A
HERC3
PTDSS1
MTERF3
SWSAP1
BAMBI
MAGI1
ZNF91
IL10RA
ZNF418
HS3ST3B1
MCM7
AP4M1
DGCR8
MCU
HEXIM2
ZNF143
JARID2
ZNF775
WDR81
TMEM161A
RNF187
NEK7
ZNF44
PER3
MEA1
KLHDC3
TMEM41A
ZBED5
SSBP3
STK11
DLGAP5
GALNT2
SAMD4B
ATP6AP2
INAFM2
ZNF516
FOXK1
SIX2
UBE2C
INPP5A
SNX18
SLFN5
MARCHF2
MTHFD1
ZNF440
ZNF436
EIF1
FAM76B
CEP57
KDM4A
SMDT1
MON1B
PRADC1
CCT7
TPRG1L
KIAA0895L
ZNF727
DDX49
COPE
SFPQ
HNRNPA0
MAD1L1
CCDC91
ZNF726
C19orf48
ELAVL1
ZNF98
USP15
PCYT1A
IBA57
FUT8
CTPS1
STARD7
ZNF776
ZNF14
NOTCH2NLA
ARHGEF9
HAUS7
NRXN2
PRPF40A
ARL6IP6
RHOB
KANK3
GBA
DGLUCY
C1QTNF6
RPS6KA5
MAN1A1
LMO4
TYW1B
LRP10
EIF2B3
GALNT10
KANSL2
ZNF92
FOXO3
SNX25
BNIP3L
TSPAN31
AGAP2
CBX8
NUF2
CNTRL
ISOC2
PAFAH1B2
GPR84
HEATR5A
ITGB1BP1
CPSF3
PRDM9
OPA1
INTS10
GNAL
KCTD2
ATP5PD
ECHDC3
ZNF66
GLRA3
ETFBKMT
USF3
FAM117A
INTS4
LANCL2
MAP2K3
LSM4
NSMCE1
VEZT
FGD6
TTLL5
ERG28
RFWD3
HINFP
RCOR1
DDX59
BICRA
ZNF875
GTF2A2
PSMD3
NBPF1
EPB41
ZIC3
SHPK
CTNS
GNL3L
ERV3-1-ZNF117
ERV3-1
YARS1
S100PBP
YBX1
PTMA
FAM161A
PJA2
MZF1
CDC73
CHD2
CERS6
ZNF17
LUC7L2
E4F1
PMF1-BGLAP
PMF1
SUOX
CAPSL
ATP13A1
ZNF101
USP3
PEX2
KDSR
NPIPB9
ZER1
NOTCH2
PPM1D
TCP1
MRPL18
ZNF491
RNF139
CDCA7L
SNX15
LAPTM4A
MTRES1
BCDIN3D
ANKRD18B
RFX3
KAT6A
CDON
MTFR1
TMEM9
TCTEX1D2
ZNF799
SPRYD7
NKX3-2
NOTCH2NLB
TM2D2
ADAM9
CEP152
SLC35E2A
DNAJB1
TECR
NDUFA12
LRCH3
NUDT4B
SPDYE14
SPDYE10P
WBP11
C12orf60
TMEM170A
UPRT
RNF13
UAP1
SRGAP2C
FAM72B
MED13L
H1-7
PAF1
ZBTB3
GFM1
DROSHA
C5orf22
COPS3
BRPF3
ZNF709
PSMD9
HPD
HSP90AB1
IQCH
AAGAB
DERL1
MUC1
PLAAT1
RUVBL2
GYS1
ARHGAP39
NPIPB6
SELENOI
ADGRF3
MRPS23
CASTOR2
ASF1B
RIPK2
PPM1L
RABL6
GLS
UGCG
RBMX
TOR1AIP2
TOR1AIP1
NCBP2AS2
NCBP2
FAM227B
DTWD1
KLF9
EPHA4
CSTF2T
ANO10
NEBL
GUK1
ERCC1
RBX1
SAV1
ARHGEF10
ZNF732
BMS1
ARL14EP
HYAL2
GMNC
PKNOX2
FAM222A
ZNF700
ONECUT2
SLC39A13
CHD1L
PRKAB2
SETD1A
RNF6
ZDHHC5
EIF2D
NOTCH2NLC
NDST2
FAM76A
ZDHHC13
RPL37
FRA10AC1
AP3S2
BRMS1L
HECTD1
PIGX
CEP19
SIN3A
DLL4
PAK2
CIZ1
PEX5L
VAT1L
SH3GL1
CHAF1A
INCENP
RTN4
TST
MPST
DVL3
DSTYK
LIG4
AFF1
ABHD13
SS18L1
PSMA7
LMBR1L