ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637467 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◣ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

CALCOCO1
IFRD2
BTRC
TCEA2
MMACHC
CCDC163
TMEM115
CLPB
TSNAXIP1
RANBP10
SMPD3
AP2S1
FEM1A
GTF2H4
UCKL1
CCM2
PRCC
CHMP4B
WDPCP
MDH1
RHEX
CALR3
C19orf44
NUDCD1
GSPT1
ZFYVE1
MRPL24
ST3GAL2
PKIG
PPIAL4C
HIKESHI
PEMT
PNKD
AAMP
PHB
PLCL2
SCNM1
LYSMD1
APBA2
MICOS13
HSD11B1L
FRG2C
PCDH10
AHCYL2
BANP
KBTBD6
SLC39A1
CRTC2
C1orf159
PPRC1
ALDH1A2
SLC4A2
CDK5
ATP2C1
STATH
ZNF444
TOX2
PI16
RBL1
RUBCNL
KBTBD7
CYTH1
PAFAH2
MAD2L1BP
GTPBP2
PPP1R16B
BOD1
EMILIN1
GLG1
AGBL1
PHF12
TMTC3
CEP290
WDR74
STAU2
INTS9
HMBOX1
HHIP
CST5
ING3
VCPIP1
C8orf44-SGK3
GRAP2
IQGAP2
DCLK3
KMT2B
NKAIN4
FARSA
CALR
DSTYK
PANK4
HES5
SLC35B4
SHQ1
STK17B
NPIPB15
INVS
ERP44
BNIP3L
PARL
CR2
NFE2
PPP1R12C
NPRL2
CYB561D2
ZMYND10
BIRC5
PPIAL4G
EMP3
CCDC114
UNK
H3-3B
SCAF1
RRAS
FBXL19
SRPK2
KCTD9
CDCA2
PPP1R12B
CD300A
WNK1
ACADM
NFRKB
BAIAP2
VAT1
GATB
TRIB1
CHCHD2
DEGS1
NTAN1
GFUS
POLDIP3
SSBP1
GNA15
KANSL1
ARHGEF7
TSSC4
UBR2
LARS1
C3orf86
FBXW11
KRTAP16-1
VPS50
HEPACAM2
OR4D1
MND1
CCDC146
ZNF331
FBXO48
APLF
FASTKD1
PSMF1
TIMM21
FBXO15
CAPN15
ZNF225
COPS4
SLC2A6
SUFU
ACTR1A
ZFYVE19
DNAJC17
NBEAL2
CTU1
UBQLN4
LAMTOR2
LTB
LST1
CD69
ZNF335
VIPAS39
AHSA1
TGM6
RPS7
H2AZ2
CCP110
SYTL2
FAM222A
ADA
RANGAP1
SLC12A6
ATP11B
BUB1B
PPAN-P2RY11
PPAN
ANGPTL6
TESPA1
PTPN6
C12orf57
TNFRSF13B
CCAR2
C8orf58
DGKA
PYM1
SEC14L2
DDX4
TFEB
PHF13
ITGA6
GSK3A
NSFL1C
CCL1
RAB37
TNFAIP1
IFT20
CXCR4
RUFY3
STAU1
GFRA4
MED23
JOSD2
ASPDH
LZTFL1
RIC8B
ZNF354A
GZMA
MAP1LC3B2
LSM4
FXYD2
GPKOW
TJP1
SYMPK
FOXA3
PEX14
DFFA
RCSD1
SOX6
C11orf58
ABCF2
CHPF2
ZNF337
ATP6V0A1
NAPA
ABHD12B
ZNF605
TLR9
ZSCAN22
WDR24
EPHX2
SOX17
GSR
MDM4
CD1A
DCAKD
NMT1
COX7C
TMEM70
ELOC
TFPT
PRPF31
MX2
STK25
LAT
MSL2
DDX23
HSPA13
DYNC1I2
FAM193A
PYGM
ASB2
CLEC16A
DEXI
AP2M1
RPGRIP1L
FTO
RPL29
SLC47A1
SIRT4
TFAP2E
UBE2J1
DCP1A
APBB1
LDLRAD4
DLC1
ZNF140
RABAC1
TTI2
ZNF133
TAS2R50
TMEM59
NUF2
RFX8
MAP3K8
ZNF821
NEIL3
FMNL1
CCDC90B
CHCHD3
MRPL1
PRRG2
NOSIP
DPP6
SLC33A1
SYT12
ARL17B
ARL17A
PSMD11
SPATA46
LIMS1
ARHGAP24
CDT1
THEMIS
ZBTB45
NDUFS7
TES
FGR
PLAAT5
NUDT13
PRKD2
H6PD
EPHA1
UTP3
LMO2
TMEM127
CIAO1
N4BP2L2
MARS1
ARHGAP9
HEMGN
ITGA4
TPGS1
FOXP1
LYST
SNX17
EIF2B4
FHAD1
ATXN7
PNLIPRP3
PTDSS2
DRC7
DESI2
CDK8
PEX3
ADAT2
NET1
TNFRSF1A
FAM185A
NDUFS3
KBTBD4
DUS3L
RPIA
MMP9
DBNDD1
MTF2
ORMDL3
TNPO3
ZNF500
HECTD1
C19orf53
FNTB
THYN1
ACAD8
MRPS31
TTC13
STK4
AURKAIP1
TMEM245
TMEM107
FAM3B
SLA
ZNF784
ERAP1
FIGNL2
SMARCAL1
CCNG2
ALDH3B2
DTHD1
REPIN1
TTBK1
GCSAM
RETNLB
SNAPC3
ZNF165
CSTA
IPO4
ASXL1
BUB3
TOR1AIP2
TOR1AIP1
ATAD2
SMAD7
PLK1
ABTB2
FBXO46
MEIOSIN
TRAFD1
FAM228B
SF3B6
DHX33
AAR2
PPIAL4A
PEX26
SCGB1C1
RGL4
ODF3
RAB1A
TSC2
NTHL1
GP5
LGMN
RCAN1
LAIR1
TSC1
GFI1B
CHST12
ZSCAN5A
NME1-NME2
NME1
PHF19
MRPL44
SNRPD3
GUCD1
PTCRA
ADD3
SERHL2
NSMF
PALLD
TNFRSF4
CDK5RAP3
LIMS4
LIMS3
CCDC150
RLN1
DHRS11
CDK5RAP1
SCML4
CBFA2T3
AFF3
TTC33
TLR6
SIRT2
NFKBIB
IDNK
PVRIG
PPIAL4H
FCGR2A
CD1B
MED15
ZW10
INTS12
GSTCD
BORCS7
NSA2
GFM2
YPEL3
TBX6
TLE3
STARD10
SPC25
ZMAT5
UQCR10
BICD2
RASAL3
PANK3
ZNF354C
WDR87
SIPA1L3
FOXN1
FAM168A
STAP1
ADAMTS1
SF3A3
CDK5RAP2
CFAP20
REXO4
ADAMTS13
GATA2
RBM6
THBS4
IFIT3
RALGAPA2
TBC1D10C
KCNA2
SCRIB
C16orf91
USP48
CXorf49B
CXorf49
LCK
RAB5C
UBAC1
ZNF56
ZCCHC8
ZNF343
AOAH
LEF1
PHF23
GABARAP
DVL2
PEAK1
HMG20A
SMCO1
FRG2
HRH2
MFAP4
LIG4
EVPL
TMEM222
AFF1
PRPF40B
NCLN
TRAF4
NOP14
GRK4
TRAPPC3
ZGPAT
ARFRP1
KLHL20
MBNL1
TLE4
RIPK4
HDAC7
CYB561
HIPK1
PEX5L
GGA2
PIGU
RPS20
FAM207A
ZNF749
TMEM160
MEN1
NR1H2
IFNB1
LETM1
MYO1G
RBBP5
RTN4
FLT1
TRIP4
STMN3
RTEL1
ZNF595
CCNI
MYLK4
DPY19L4
AQP3
USP30
PTK2
ATL2
CISD3
LRIG1
ADAD2
EPSTI1
THRAP3
WDR36
C17orf75
PNPLA6
CWC22
ZNF354B
ETV3
ICAM2
TMEM102
FGF11
WBP2
GTF3C2
PRKCI
NIBAN3
BRF2
ARHGEF3
ZNF563
GCNT1
ZFYVE28
CFAP99
CAPG
VPS25
PPIAL4F
PPIAL4E
PPIAL4D
DUX4
RPL18A
BCL3
SYNGR4
CLDND1
D2HGDH
PDE6D
COPS7B
ATP13A1
ZNF101
VOPP1
THAP11
NUTF2
CENPT
H4C12
GALK2
COPS2
PLCG1
ZNF169
ZSWIM9
LIG1
PRDM1
CASS4
MTRNR2L1
RBM28
BHLHE23
TRAT1
COMMD2
ZNF230
RPS13
CNOT4
ZNF408
ARHGAP1
ACSF3
OR10T2
MITD1
SUPT7L
SLC4A1AP
JRK
MAMSTR
EIF3F
TCF3
TMEM258
FEN1
TACO1
ACTR3C
OGN
UBE3C
RBM38
SMO
SNX1
CIAO2A
NUMA1
LRTOMT
GPANK1
CSNK2B
LY6G5B
C6orf47
SNRPB
RPS26
CANT1
MRPL39
AGPAT3
ZNF527
KCTD5
NANOS3
BOLA1
ASAP1
ZNF570
ZNF569
ADARB1
KRR1
SDHAF3
ARID3B
MZB1
ZFYVE21
XRCC3
TRAF3IP3
SYTL3
ERGIC1
ORAI2
TMEM101
TTF1
TRAF7
ALG10
WIPF1
SWI5
GOLGA2
NUCB2
MFSD2B
ADORA2A
S100Z
DGAT1
PLAGL1
STAT4
TBC1D21
L3MBTL2
RUVBL1
CASP8
STX18
LTA4H
NFKBIZ
S100A6
S100A4
S100A5
ALG10B
SAR1B
TBC1D19
MFSD3
GPT
TMEM163
CLTC
SH3BP5
C12orf43
ATP5PO
RPL23A
RAB34
AGK
CPPED1
BTN3A2
NOP16
HIGD2A
ITGB3BP
EFCAB7
OSBPL5
KIAA0408
PA2G4
ARMH3
MLEC
PTPN3
CLMP
TOX
GTF3C3
FAM163B
YJU2
CXXC5
IL17RA
SEL1L
TRIM47
ZMPSTE24
ZCCHC4
ZNF226
WDR46
PFDN6
ADGRE1
IL23R
ARHGEF1
MRPS18C
HELQ
GTPBP3
ANO8
SIT1
AKIRIN2
YIPF2
TIMM29
FBLN2
COX16
DEK
CACNA2D4
TOP3B
GPR160
NCOR2
MTOR
ESCO2
SNIP1
DNALI1
NUP54
ZNF420
CCDC88B
TMC6
TMC8
SMG8
MKRN3
SLC7A8
TMEM208
LRRC29
LMNB2
LSG1
SUGP1
MAU2
GPAA1
EXOSC4
TUT1
ANAPC5
GTSE1
TMEM242
XPNPEP2
ZNF235
LPAR6
ENOX2
ATP2A3
HEXIM2
DEF6
FNDC11
SLC17A7
TULP2
NUCB1
WDR83OS
WDR83
MAN2B1
MAX
CD82
SH2D3C
DDX49
COPE
POMT1
ARHGEF2
ZNF329
ZBED4
TGFBR2
ITGAL
CBARP
ATP5F1D
DHX8
ASPRV1
HBP1
PPP1R18
RAPGEF1
ASNS
ZP1
CNN2
LIME1
CIC
DGKZ
VPREB1
BCL9
RSAD2
B3GALNT2
ADGRG1
UBC
BPI
GUK1
MGRN1
PIH1D2
NKAPD1
SCGB1C2
CHRNA3
SMARCA2
GRK6
CHMP7
THOC2
RTTN
SPHK2
RPL18
FAM83E
FMO1
MSH5
CLIC1
ING4
CCND3
TAF8
AP1G1
NDUFB3
FAM126B
ARHGAP4
PPIP5K2
GIN1
GOLGA3
EVL
CTF1
BCL7C
MYO18A
KAT7
HERPUD1
RPP40
CA11
IQGAP3
LAX1
ZNF227
CST7
SMUG1
VKORC1
SDE2
TMEM229B
CMTM1
SLC39A3
ANKRD40
ST8SIA4
PTPN22
C19orf67
MTA3
DNM1L
MTBP
MRPL13
MRPS16
DNAJB4
DENND2D
GAS7
PCNP
HUS1
EMSY
NPVF
SLC25A19
NEDD8-MDP1
NEDD8
GMPR2
TM7SF3
KIF15
KIAA1143
TMEM178A
UBE3B
SLFN12
CTDP1
PPP2R5B
ARHGAP45
MTMR9
AQR
SEC13
MAP3K7CL
RNF166
LNPEP
SETMAR
MRPL16
ODF3L2
WASF1
CDC40
TMEM123
PDE4B
SSH2
B3GNT3
RAB29
ARHGAP19
CALM1
CNIH4
SNAP47
JMJD4
BMS1
NOTCH2NLC
CALM2
ZC3HC1
TTC4
BUB1
METTL26
PPP5D1
CALM3
CTHRC1
SASS6
UCK1
FIS1
CCPG1
C15orf65
IFNA1
TMIGD1
TEFM
IZUMO1
RASIP1
LRFN3
ZBTB7B
ZNF277
DOCK4
AKNA
ZNF224
TRUB2
COQ4
ETFDH
C4orf46
KMT2D
C16orf54
USP44
SELENOH
STK16
GLB1L
HDAC9
BLK
GNG12
DLX5
NMT2
RNF125
FCRLB
ARL5C
MRPL3
ZNF436
LTN1
TMEM43
CHCHD4
ZDHHC14
PPARG
NKD1
ASIP
ZC3H6
H4C11
CDH23
COL6A2
VRK1
CLN3
APOBR
CDCA8
C1orf109
SBF1
SOAT2
SNX16
TXNDC9
EIF5B
ZNF850
CLP1
MYL6B
RNF220
GRHL3
RORC
AHCTF1
WDR97
MAF1
ZNF554
HNRNPA1L2
ELFN2
RRP15
ARHGEF18
RAB27B
PSMC2
DNAJC2
SEC22B
SRSF10
SMIM33
DMAP1
SEPTIN9
NUP153
ZNF688
ATP5MF-PTCD1
ATP5MF
NR1H3
ACP2
DDX1
SLC39A8
HSPH1
PIK3CG
TTC39C
CDC6
CCDC88A
AMD1
MRPL21
IGHMBP2