ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
CCAR2
C8orf58
IPPK
ZMPSTE24
EXO5
CD33
SCNM1
LYSMD1
CAP1
ZFP69B
GRPEL2
MTMR9
LAMP1
SH3BP2
CD1C
ALOX5AP
CAB39
GLRX
ITGB2
TEAD3
CSF1R
RPS19
WDFY3
ITGAM
NLRP12
NFYC
NCF2
RXRA
NCF1
LGALS8
SUN1
STEAP4
PNP
RAB3IL1
PGA3
NDUFS2
ADAMTS4
SNRNP200
S100A8
FAF1
IL1B
RAB24
PRELID1
TLE3
PGK1
SPATC1
ZFP69
VTA1
NMBR
TSSC4
IL7R
CD244
PPT1
HBS1L
HAUS6
ABT1
MTF2
GPBAR1
EXOSC3
MRPS18C
HELQ
ARHGAP30
SP110
TRIT1
SETDB1
FCER1G
PGA5
CITED4
CEBPD
FRG2
FLI1
RMND1
ARMT1
EXT1
IPCEF1
TP53I11
RASA1
SLC12A6
NOP10
NUTM1
PPIH
PGA4
SPDYE13
MRPL24
CMIP
PDLIM2
FCGR2B
ARPC3
TMEM154
RMDN1
COL9A2
SNAPC3
IL16
DUSP7
SASS6
RNF149
NDFIP2
IFRD2
MTPN
LUZP6
FCAMR
NUF2
UCKL1
MTRNR2L8
POMP
ZNF408
ARHGAP1
VCPIP1
C8orf44-SGK3
MMP9
PRR5
CCND3
UBR7
GON7
NIP7
COG8
SRSF11
LRRC40
TLE4
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
MFSD2A
ARPC2
FAM207A
GPR68
RNPEP
PPIAL4F
PPIAL4E
PPIAL4D
FOXJ3
CMTR1
RASSF5
HIBCH
ZNF410
SMAP2
MIA3
DISC1
ATP5MPL
MMACHC
CCDC163
RPL37
SLC25A32
DCAF13
MSH6
FEM1A
VPS33B
RAPGEF1
RUNX1
UBAP2L
C1orf43
HEATR1
RWDD1
TFB2M
CNST
CEACAM21
CUL7
ATG5
TIGD4
ARFIP1
PPP1R12C
URM1
EIF3D
STK4
TRIM35
PTK2B
SORBS3
UBAP1
EIF2D
SELENOH
YES1
EPRS1
ADGRE1
NOTCH2NLC
KHDRBS1
MEFV
TNFAIP8L2
ANKRD33
ZNF484
TMEM30A
SUSD6
CBWD5
MAP2K1
USF1
RUBCNL
ZP3
MOB4
UBXN8
RTF2
TMEM59
HMGB1
USPL1
MAP1S
UCHL5
RO60
NIBAN3
FCRL4
TNFAIP1
IFT20
INTS9
HMBOX1
TIPRL
DNAJC10
ADGB
CHMP4B
TMEM127
CIAO1
DCP1A
PISD
MXD3
OAS3
CCL3
CCL3L3
CCL3L1
TTC14
WDR70
TOMM20
MRPS31
CD1A
DOCK8
GPAA1
EXOSC4
MED18
CPNE5
ZNF197
XRCC5
TPRKB
DCAF10
LTB
LST1
ARID2
WDR55
SERPINB13
HARS2
HARS1
CLIC5
TMEM104
NAT9
TGFBR2
SIGLECL1
TIMM21
FBXO15
DGAT1
PEX12
UXS1
SIGLEC11
INAVA
MDM4
C4orf3
TTC13
INPP4B
UTP3
KIFAP3
RNF151
TBL3
GTF2H2C
GTF2H2
CXCL1
UGGT1
ZNF696
CCL26
TAGAP
IKBKE
CCL2
STK36
RNF25
RGS12
ATP6V1C1
FPR1
DMRT2
LCP2
SCAMP2
SIGLEC9
WDPCP
MDH1
OSCAR
NDUFA3
MYBL1
CBWD1
SLC33A1
NECAP2
RPL8
TEKT2
ADPRS
CTSG
CCL4L2
NFKBIL1
ATP6V1G2
SCAF11
ARHGEF1
C6orf89
MAP3K7CL
THAP6
CCT8
UBLCP1
IFNGR1
KBTBD6
TMEM53
ARMH1
NDUFS3
KBTBD4
ZNF622
FKBP1A
VPS25
RGL1
ARPC5
NOXA1
MRPS23
EIF2B3
NSUN5
JAML
ACTRT3
PRPF3
RNF141
RAC2
AGTRAP
SNX19
LRFN3
DR1
HAX1
ASXL2
RTCA
ATG16L1
PDCD2
MIDEAS
ZNF227
GCLC
B3GALNT2
PIGM
TCF12
EMILIN1
DUX4
OSM
P3H1
FCAR
PPP1R12B
WNT2B
SDCCAG8
CEP170
N4BP2L2
PEX3
ADAT2
GOLGA7
NOL11
AOPEP
CBWD2
SDHAF3
MTRNR2L2
MSH3
DHFR
PKD2L2
OTUD7B
DENND4B
ROPN1L
SCAF1
RRAS
RRS1
ADHFE1
TADA1
TRPV4
PIGU
GOSR1
MTMR14
GALK2
COPS2
TPK1
NOTCH2NLA
AGGF1
ARHGEF12
FUCA1
SLC35B4
AKR1A1
MFSD10
CALCOCO1
MTRNR2L1
ZFYVE1
CAPG
TRIP4
FBF1
PIKFYVE
MARCO
FBXO46
MEIOSIN
PSMD7
FAM120B
TOR4A
CCL17
APPL2
MRPL10
LRRC46
SF3B1
RALB
EXOC3L1
E2F4
ACAD9
TATDN1
NDUFB9
ZNF780A
ADGRG5
CEP350
CHCHD5
SNX3
GOLGA5
ZNF56
PACC1
CALHM6
CLDN19
ACVRL1
PIGBOS1
PIGB
WDR61
TCTEX1D1
STAU1
TMEM186
PMM2
ZNF331
PHACTR4
MAMDC2
NOB1
TAF11
ANKS1A
PRKAB1
CSF2RB
SIGLEC16
THOC5
NME7
BLZF1
STARD6
C18orf54
CCNL1
CLPP
GET4
C1orf74
SLC22A16
UCK1
FAM227B
DTWD1
THAP12
GVQW3
CBWD3
FCGRT
FRG2C
SLC24A1
INTS14
TBPL1
PDPR
KLF2
PA2G4
SNRPC
TAF12
ZNF142
BCS1L
PPIAL4H
GSPT1
ZNF337
ITGAL
MRPL17
CSRP1
KBTBD7
IPO8
XRN2
NR1D1
SRSF4
FASLG
NOL6
IBA57
SYMPK
FOXA3
UBL7
TERF2
OPA1
NFX1
THOC3
LOC100289561
DESI2
TPM3
TLE1
AP1B1
UBR1
WIPF2
A2M
PRKCD
INTS1
CXXC1
KATNBL1
PLEC
MAN1B1
SEMA4C
TOR1AIP2
TOR1AIP1
ARHGAP25
SUCNR1
DAP
JOSD2
ASPDH
RPL37A
GTPBP10
RPS6KA1
PPCDC
HK3
PHB
ORMDL3
BRIX1
YKT6
ELOF1
S100A2
CARD19
FITM2
RPL27
DYNC2H1
DUSP6
DBI
C2orf76
DNAJC16
CASP9
NAPG
TAF13
ATP5PO
RAD50
ADAMTSL4
LAMTOR5
PDF
PHC2
HDDC2
PICALM
CCDC149
GUK1
RANBP3
HSPA13
PGBD4
EMC7
TBL2
NLRP3
LILRA2
SLC18A1
MRFAP1
IRAK1BP1
CFAP298-TCP10L
CFAP298
GLI4
EML6
WDFY2
TPT1
C22orf34
GTF2H2C_2
SSNA1
ANAPC2
CCDC30
OAS2
LYPLAL1
SPG11
ZMYND12
PPCS
AP2B1
NCSTN
COPA
SLC31A1
FKBP15
OCSTAMP
ZNF668
ZNF646
SF3A3
CIAO3
MED10
SLC37A4
IGSF10
SLC39A1
CRTC2
TBC1D23
GNAI2
NUP133
MDN1
PUM1
ADAM10
RAB1A
TSN
HUS1
MTFR1
KCTD5
MLKL
RNF14
NFAM1
TMX1
TUBA8
EMP3
AFG1L
RRM1
SF3B5
CCDC114
PPIAL4G
CEACAM4
RPIA
MEF2C
BOD1L1
TCTE3
ERMARD
CALR3
C19orf44
AHCTF1
TLN1
CREB3
ZCWPW2
AZI2
NUP58
RPL29
RPS16
NR3C1
RNF181
PES1
PPME1
C2CD3
TRAPPC4
RPS25
TOMM6
ZNF697
TCN2
C1orf54
APH1A
RGPD2
RGPD1
LMBR1
VPS26C
RPL5
MPZ
BID
VCPKMT
BOD1
COPB1
ROGDI
SMIM22
ANXA2R
SEMA4B
OBI1
CHN2
ACP3
ADORA1
BOLA1
ADSS2
C1orf198
ETNK1
TRMT11
SYNE3
GOPC
MAPKAPK2
CTU1
RHEX
GTF2B
ZFP64
ADAP1
CCL22
MRPL55
FRG1
DNAH14
SIGLEC6
SYNGAP1
CUTA
ATG7
GNPAT
C1orf131
CSNK1A1
MED23
RPL22
SART1
ZNF614
SRP9
NBR1
USP3
SLC1A5
GIMAP8
ZNF350
CTDP1
ZW10
IL6R
SRPRA
MRPS35
OCIAD1
CATSPERE
DECR1
SNAP47
JMJD4
KIF15
KIAA1143
CBWD6
RAB44
UBE2V1
DHDDS
KIAA0513
CERS2
IL1RN
ANXA9
PARVB
GRK6
PPP2CB
KCNK6
NKAIN1
ZC3H6
ADAM17
TRIM37
SNX17
EIF2B4
LTA4H
NGB
RSL24D1
XRRA1
SPCS2
NUP155
MTMR6
S100A9
PUM3
SH2B1
TUFM
SEC14L1
VIRMA
LAPTM5
GTF2E2
CLEC16A
DEXI
CNOT1
NKIRAS1
RPL15
SKP2
LMBRD2
NOTCH2NLB
SNAPC5
SLC35F6
MEN1
ARID3B
CHMP7
EEF1AKNMT
TRIP11
FIGNL2
COPS8
CTNNB1
TBRG1
MED4
ZNF12
C1orf100
NUDCD1
RIC8B
ZNF140
RPL36
GZF1
NDUFC1
NAA15
CHMP5
BAG1
ESRP2
CCDC146
GGPS1
ARID4B
LTN1
LAMTOR1
ZNF318
STON2
ABCD3
RPS7
PPP1R11
CGAS
TNNI2
LILRB4
USP15
ZNF221
MRPL44
ZNF397
DCPS
ABCA3
VIT
RPS20
HIGD2B
BBS4
RPL38
COX7A2
DDX41
ORC5
TLR4
AHI1
OR4Q2
CCDC150
RPL11
ZNF354B
EMC8
COX4I1
BIN2
RNF216
RARA
INPP5D
POLN
HAUS3
APOL2
GBA
RC3H2
TRIM25
RASA3
CD5L
PRRG2
NOSIP
MCOLN1
LYNX1-SLURP2
LYNX1
EED
BHLHE40
THRAP3
KIAA1586
SYK
NSMCE3
GHRL
ZNF26
BRF2
TBP
PSMB1
LONP2
ABCC11
DAB2
TMEM208
LRRC29
SEC22B
TRIAP1
CTTN
CNPY3
LIN54
PNPLA6
PPP6C
IPO13
LTO1
ERI1
MAK16
LATS1
PTK6
POM121
CD53
EFHC1
SMARCD3
NCBP2AS2
NCBP2
SLC44A1
CRBN
PSMD9
HPD
YWHAB
NDUFAF6
SGO2
PSMA6
SPINT1
SLC35F5
AVIL
ZNF225
MAD2L1BP
GTPBP2
PCBP2
UTP23
CTR9
CDC42
OAF
NCKAP1L
LILRA1
ZNF567
NOTCH2
ABCB10
ATP2B4
WDR7
TRMT61B
KIF2C
MAGEF1
TESK1
CNIH4
UFL1
PTTG1IP
OAS1
TRIM55
ZNF230
INTS12
GSTCD
SEC13
TOMM7
YTHDF1
LMO2
CYB5R1
THEMIS2
MRPL16
ZBTB22
DAXX
GABPA
ATP5PF
SLA
GNAI3
FAM185A
KLHL20
WDR36
ZNF354C
SMIM26
ZC3HAV1
NPRL3
SLC30A7
EXTL2
SLC7A6OS
PRMT7
ST7L
CAPZA1
AGT
SSBP1
TPR
ODR4
DOK2
TAF1B
ZNF549
TCHP
DNAJC5B
WSB1
GRK2
DDX23
ZC3H11A
ZBED6
ALG10B
SKIV2L
NELFE
TOMM22
EPN1
CEP63
ANAPC13
ZNHIT2
FAU
WASHC5
NSMCE2
NCF4
DEDD
SNU13
FGR
SPRTN
EXOC8
UQCRC1
TM6SF1
IFITM2
NAPB
ZNF212
RNF139
KATNA1
UBE2Q1
DUS3L
VKORC1
SYT11
GON4L
UNC50
COA5
PPIL4
MRPL45
SRBD1
SPHK2
RPL18
FAM83E
TMEM222
DDX18
NDUFV1
ERLIN2
DNTTIP2
FAM200B
STAT2
APOF
WDR27
C6orf120
AP3B1
TEP1
BCL2A1
SIGLEC7
RRP15
SAMD4B
TRIM46
KRTCAP2
TNK2
MED15
ATP6V0B
DPH2
PPP1R15B
B4GALT2
WDFY1
ICAM1
PROS1
ZNF189
MRPL50
NDUFAB1
TIGD6
HMGXB3
FBXW2
PKN2
HMGCL
SHPRH
DHX15
BATF
TTC33
ZNF721
PIGG
MTERF1
TAB1
SMIM15
TCTEX1D2
TMTC3