ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CPSF3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◣ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

GH1
RABL2B
ZNF335
RABL2A
TSN
MAPKAPK5
SRD5A1
DYNC1LI2
H3C15
H3C14
H2AC19
H2AC18
ICE1
NUP85
NVL
CACTIN
VDAC2
PSMD12
REXO1
POLR3F
DZANK1
OAZ3
MRPL9
RWDD1
IPO13
MRPS7
GGA3
NCLN
NME6
CAPRIN1
HSPA9
B3GALT4
C19orf48
UBE2I
ZC3H10
RPL41
GOSR2
POLR2E
FAM187A
EFTUD2
CCDC103
TAOK3
SUDS3
VPS52
RPS18
SLC35B1
LYRM4
FARS2
SUCLG1
DCTN1
H4C15
H4C14
VTI1B
ZNF576
IRGQ
UPF2
MRPS5
SNAPC5
BLCAP
VEZF1
PSMG2
CEP76
EXOSC5
BCKDHA
H2AZ1
DNAJB14
COX20
PSMD1
ACTR10
VARS1
CDC73
COX7A2L
RBBP5
VPS28
FRG2C
COMMD1
CCT4
SEC61B
ALG2
SCRIB
SART3
ISCU
STAM
TSNAX
PI4KB
RABGGTB
HADHB
HADHA
SKP1
POLG2
AMDHD2
PHF23
DVL2
SUMF2
C6orf226
RRP36
MEA1
USP1
EDC4
PES1
RPL17-C18orf32
RPL17
C18orf32
STAM2
POLR2J3
COL23A1
PDAP1
BUD31
MTRNR2L8
FARSB
KRBA2
EPN1
NDUFA4
FRG2
TLCD1
NEK8
PTGES2
ATP5F1E
ZRANB2
SYNRG
SELENOF
HS2ST1
TAF9
RAD17
AK6
EIF4ENIF1
H2BC5
H1-4
ATP5MG
IER3
FLOT1
H1-2
PIN4
NUP205
NRAS
SUPV3L1
ZNF34
RPL8
FAM174C
SECISBP2
RPL21
EIF2S3
H2BC21
H2AC21
H2AC20
PAK1IP1
GCN1
C6orf52
PNO1
PDHX
APIP
TM9SF1
H4C11
RPS11
H4C12
MAZ
MPDU1
LOC100996842
CD68
MTRNR2L1
AXDND1
IDI1
H4C3
H1-6
CUL7
INPP5E
RIT1
GADD45GIP1
AKAP8
H2BC4
H2AC6
UBE2M
CHMP2A
NFKBIL1
DDX39B
ATP6V1G2
MRPL24
ANAPC7
KMT2A
FAM131A
GOLGA5
STUB1
JMJD8
DNAJC9
TMED1
DPH7
RNASEK
C17orf49
RXYLT1
PRRT2
PAGR1
VPS9D1
MRTO4
EMC1
APOM
NECAB3
RPS27A
CLHC1
BAG6
MRPL38
TTC8
RPS23
ATP6AP1L
SEC31A
RCOR3
YJU2
SMC2
DPH6
PCBP1
SRSF11
GPAA1
EXOSC4
ZNF581
ZNF580
MMP24OS
MMP24-AS1-EDEM2
H3-3A
PCBD2
OR6B2
NDUFA10
SYCE2
OAZ1
H4C2
H3C2
SGSM3
H2AC4
FAM104A
C17orf80
BICRA
TMEM132A
RPL35A
IQCG
C19orf53
H3C13
H2BC18
RABL6
GLRX2
CHD2
DHRS11
ADK
ECI1
TIMM13
GET4
PYGO2
LOC101928120
NAT10
PIP4K2B
RPL13A
RAD23A
ATAT1
RBKS
BABAM2
ARFGAP2
H2BC11
H2AC11
DDIT4
ENAH
SLC25A10
SLC3A2
TBK1
CDK12
SIRT7
RPN1
ID3
EXOSC6
ACP4
ARHGAP4
PROSER1
NHLRC3
MAPK8IP3
SNAP47
MAN2C1
HNRNPU
NANOS1
ABTB1
TMPPE
GLB1
DENR
TMEM230
MAD1L1
DONSON
RPS12
PHF1
ASB13
ZBTB37
DAPK3
GGA2
NDST2
GTF2IRD2B
ANKLE2
SCAMP3
OTUD7B
BAZ2A
MEMO1
CENPVL3
ZNF513
GTF3C4
DDX31
SF3B3
COG4
AP3M1
DPY19L4
HSPA1B
MSH4
LRRC37A3
DENND4B
H4C1
TBCK
EIF2D
AIMP1
PRKAG1
MRPL40
MORC3
HIRA
UFM1
DRAP1
C11orf68
CCDC138
RPL22L1
RPL7
RDH10
BCAP29
ZNF341
RABGAP1
KIF27
TAF10
TARS3
PFDN5
MYG1
DYRK1B
USP21
GRAMD2A
XPNPEP3
ST13
DNAJB7
CMTR1
RHOT2
H3C1
H1-1
PPARA
CISD3
MAML1
RPS2
NDUFB10
MTRNR2L2
MSH3
DHFR
WDR90
POLR2C
CDK9
CNPY2
CTNNB1
PAF1
DGKZ
PNMA1
HYI
ADNP
C7orf26
ATXN7L2
SPATC1L
CLK3
ZNF398
EGLN1
KLF12
NDUFS3
NAXE
KBTBD4
C5orf24
HOXA3
GTPBP6
TBC1D13
PPFIA4
ROGDI
PACS1
ID2
PPP3CB
GPS2
CCDC34
RNF166
CTU2
AGO3
ALKBH5
MORF4L1
TOM1
ADARB1
LAMP1
MOV10
TUBB
ATXN2
ZNF653
UCKL1
RPS29
LRR1
FTH1
H2BC12
H2AC12
NFAT5
RCC1
PABPN1
ZNF76
POMZP3
SURF6
LRRC24
CXorf38
C8orf82
BRWD1
STRIP1
UPF3A
POLDIP3
NME3
MRPS34
EME2
XRN1
FUT11
TXNRD2
PRRC2B
COMT
DESI2
TRAP1
ZMIZ2
IMPDH2
H4C8
RUFY2
KIAA2026
H4C5
B4GALT7
PCDH9
HMCES
RAB4A
PRKRIP1
SELENOH
ZNF862
RUVBL1
EEFSEC
ZNF383
CIRBP
H2BC7
NOXA1
FAM118A
IBA57
KMT5B
ZCWPW1
MEPCE
ZNF865
TTC33
C17orf75
SLC39A13
TRIM65
TSPAN10
NPLOC4
PRSS27
TXLNA
CELF1
NOLC1
FBXO4
FBF1
HMGN2
TMEM223
TMEM179B
SMYD2
RICTOR
RHOB
NOTCH2NLA
PPP1CC
MLX
BAG2
SNAPC4
MTHFS
GPX1
FDX2
RCE1
RPL6
PAXBP1
FNBP1
ST3GAL3
POGZ
GORAB
FLOT2
BNIP3
PCBP4
TTYH2
CHAF1B
SLC25A42
PURA
SH3BGRL3
NDUFS7
STMP1
KAT6A
VARS2
AKT3
RPL13
HIPK1
TMEM79
SMG5
FBXL3
ASXL1
SETD6
ZFAND6
LMBR1
H3C4
H2AC7
PCBP2
CUL9
TRMU
JUNB
TEX38
MKRN2OS
MKRN2
ATPAF1
RECQL4
RASA4B
LRRC14
SRRT
SSX2IP
SAMD1
CTNNAL1
RRM2
DNAJC21
VPS4A
MTF2
NKIRAS1
TMEM150A
NOTCH2NLB
UFSP1
SPHK2
RPL18
FAM83E
ACHE
ACBD6
NPM3
FGF8
COX18
LLGL2
NCBP3
HMGN1
DIDO1
HNRNPF
SLC39A4
CPSF1
NUB1
SLC39A7
RXRB
KDM3B
HSD17B8
SRCAP
LUC7L2
LOC730183
TMEM267
HDAC10
CHD1L
TP53BP2
TIGD3
NUDT16L1
SLC39A1
NOTCH2NLC
CRTC2
DSTYK
SPCS1
GLT8D1
C7orf25
CCDC88A
ANKRD54
ABL2
ZBTB45
PDCD6
JMJD4
ARF3
TARBP2
NAPRT
MAP3K12
COASY
CSRNP2
DDX59
AGK
TYMP
SCO2
NUDT4B
NCOA7
SRSF4
RFX1
DUX4
NDUFB2
GOLGA1
KMT2C
FAM207A
WDR37
GTPBP3
ANO8
CD320
KANSL1
TAOK2
PYCR2
GBA
RNF225
DERA
NBPF1
NXF1
CCDC78
THEM4
GDI1
UBA2
TRAPPC8
SOD2
BHLHA9
ACBD3
COX19
GTF2H2C_2
NME4
DECR2
DDAH2
MTRF1L
TM2D3
OSGEP
APEX1
PDCD2
BOLA3
SCAP
PARP1
MFSD14A
TSC22D1
ACADM
NOXO1
GFER
ERCC6L2
H4-16
H2AJ
GPN2
RABIF
LRRC40
STIMATE-MUSTN1
STIMATE
RSAD1
MARCHF7
PRKAB2
WDR73
STK36
RNF25
PANK3
NMB
CCDC200
TNKS1BP1
DIAPH1
RING1
COMMD3-BMI1
COMMD3
BMI1
TCF3
ARHGEF11
SLC24A1
SKIDA1
INTS14
DLG4
BRAF
ACADVL
ZNHIT2
PDE4DIP
MARCHF6
CCDC106
GAA
FAM20B
MCOLN1
CCZ1B
MTARC1
DEDD
WIZ
LBR
VANGL2
H3C10
H2BC13
H2AC13
WDR27
IREB2
DNAJB12
CDH24
C6orf120
PRRC2A
AIF1
VWA7
PMF1-BGLAP
PMF1
ANKFY1
SEC61A2
RRNAD1
ISG20L2
FAM199X
CALM1
THAP11
PHIP
NUTF2
CENPT
TRIP13
TIGD1
EIF4E2
BRD9
B3GAT3
FAM228B
BHLHE40
THOC5
LRP6
H3C12
H2BC17
H2AC17
ARHGAP35
SMIM19
SLC20A2
RPEL1
NSFL1C
RNF187
TMSB10
ARSG
TTC5
CDK11A
TFAP4
COG2
NUCKS1
JAK1
AMDHD1
GPR180
PFN1
FOXJ3
PXK
POM121C
FPGS
CHD8
KLHL11
THAP3
PATJ
TOMM20
PRDX1
SMIM13
SDCCAG8
EHMT1
CEP170
LATS1
GMPPB
GATAD2B
EPHX1
AMIGO3
URB2
TAF5L
FAM219B
ARHGAP11A-SCG5
ARHGAP11A
EDEM1
URGCP
SCFD1
NCAM2
CCSAP
TPTEP2-CSNK1E
RPS10-NUDT3
RPS10
SCAI
RRP8
ILK
DCAF10
CCDC97
RIPK1
RAD54L2
SMN2
SMN1
SLC44A1
UNC119
SRRM3
SP2
ATRIP
WDR48
SCN11A
NUDT4
MAP3K2
AKT2
UBE2J2
INKA2
DDX20
NUF2
B3GALNT2
ZER1
CACFD1
ARHGEF1
STPG3
SLC26A11
SGSH
NELFB
METTL9
ITGB3BP
EFCAB7
ENOSF1
PTCD1
CPSF4
ZNF35
ZFYVE9
LAMTOR3
SETD5
KANSL3
FER1L5
EIF4H
UBE2Z
TSEN15
SLC12A6
ZBTB2
PRR7
FAM76A
DNAJC25-GNG10
DNAJC25
TYSND1
SSRP1
POLD1
PCNX2
P2RX3
PEX7
NT5C
HAX1
EYA4
PAIP1
MATR3
DENND2B
STAU1
TMEM68
TGS1
SEC11C
CCDC130
BTBD10
AP3S2
ZNF326
RBM4
FBXW2
EIF4A1
KLHL15
NOL7
VCP
URGCP-MRPS24
RNF220
CZIB
CUL1
TRAF4
SF3B6
PSMG4
H2BU1
H2AW
WDR47
STC2
IMPA1
YBEY
MCM3AP
ORAI3
OPN3
NOTCH2
CHML
SCARF1
RILP
ZNF251
TRIM52
RAVER2
IFITM1
ECHS1
CHUK
SLC35B2
MCL1
SFXN4
KAT8
TBC1D10C
PPP1CA
MIER1
EZH2
DCP1A
ANKRD40
ZNF446
GTF2H2
WDR24
TMEM222
JPT2
GSTO2
ARHGDIA
TRIM8
SPATA1
SELENOO
REV3L
GNG5
COX5A
ING5
E2F3
POLG
CEMP1
ATAD3A
STX18
PRKAA1
CYBA
CEP350
CDC5L
TUSC2
TONSL
NUMBL
ZSWIM8
SQSTM1
CHCHD1
AKAP1
ADSS2
ERLIN1
TRIM3
NSMCE4A
LIX1L
CLN5
CELSR3
ZMYM4
RPAP3
PUS7
CDC42BPA
ZZZ3
TOB2
FOXP1
NR1D2
GANAB
PIP5KL1
UBC
SBF2
ZNF148
TRMT2A
RPS19
RC3H2
RANBP1
NPRL3
CNP
AURKAIP1
PLPP5
EXOC2
UGT1A3
PHACTR2
KLF9
CABYR
IFITM2
EFCAB2
YARS1
SP3
S100PBP
GTF2H2C
FRA10AC1
FARP2
CRELD1
CD63
KIF21A
ZBTB4
TMEM43
SP1
SLC35G6
POLR2A
PAM16
MDM4
CHCHD4
ACTB
ZNF511
TUBGCP2
RABGGTA
ATXN7
YBX1
MLXIP
AMZ2
VPS36
SLAIN1
IPO9
CKAP2
MRTFB
NFKBIA
ZFX
SDE2
OVCA2
HLA-F
HAGHL
ADIPOR1
TXN2
SEC13
MRPL12
TSC1
TRABD
SMARCB1
GFI1B
STYX
LIN9
ERCC1