ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5501661 | A-375
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◣ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

GSTA4
H4C15
H4C14
MTRNR2L2
MSH3
DHFR
PHC2
NUF2
COL23A1
MTRNR2L8
FRA10AC1
MTRNR2L1
EIF2D
DSTYK
GBA
DCP1A
TRIP4
S100A2
H1-2
TMEM107
RAD54L2
STX16
DRG2
HMGB1
USPL1
CDK5RAP1
RBBP5
TBC1D19
POLDIP3
SCAND1
CWC25
SF3A3
NDUFS3
KBTBD4
H4C11
RPL37
SMARCD2
DHX8
RPS7
SAR1B
RNF151
TBL3
WDR74
ATP5MC2
STX18
H1-3
S100A16
CTNNB1
AP3S2
NME1-NME2
NME1
SLC24A1
INTS14
TRIAP1
MRPS23
H2BC21
H2AC21
H2AC20
RCAN1
PLEKHM3
MTF2
ZNF296
GEMIN7
CCNL1
UTP3
ZBTB45
SELENOH
RGPD2
RGPD1
TTC26
CRB1
NBPF1
UCKL1
DMAP1
BNIP1
H3C13
H2BC18
SECISBP2L
MAN2C1
H3C15
H3C14
H2AC19
H2AC18
MLEC
MITD1
RPS6
SERPINE2
GTF2H2C_2
GTF2H2C
SSBP1
RAB5IF
STAT3
ERCC1
SIRT4
CCDC200
DPP9
TATDN3
NSL1
FAM3C
AURKAIP1
TUT1
WDR36
YWHAE
PPP6R1
YIPF2
TIMM29
LRRC37A3
H4C6
LAMP1
RPS2
MYO9B
HAUS8
INTS12
GSTCD
GTF2H2
ATF6
SMG8
NOB1
TSEN15
RPL12
LRSAM1
EFCAB2
NPAS4
PSMF1
PSMD3
FOXJ3
TBC1D13
RBM15B
SNAP47
JMJD4
MDM4
POLG
H2BC5
H1-4
LY6K
RPS27
RAB13
RARS1
HPCAL1
TBL1X
ALG10B
NDUFAF1
PDCD6
H3C3
H2BC3
MRPL21
IGHMBP2
RPS20
C17orf75
DDIT4
JRK
PTPN6
C12orf57
MRPL16
KBTBD6
UBQLN4
LAMTOR2
GTF3C3
RANBP2
KMT2C
H4C12
TACO1
TMEM222
FRG1
SAMD4B
SCNM1
LYSMD1
TCEA2
NR1H2
SDHAF3
CDC73
U2SURP
ZNFX1
FAM227B
DTWD1
NOC4L
DDX51
KNL1
CALHM2
COMMD9
ATP5MPL
SRSF4
STX1A
CALCOCO1
FAM98B
CCDC59
TEX46
KDM1A
GNAI2
COMMD2
SLC27A5
MED23
LARS2
PMS2
AIMP2
TAGLN2
MKRN2OS
MKRN2
SSBP2
SEC13
ZER1
NDUFC2-KCTD14
NDUFC2
GTPBP6
FXYD3
CCDC90B
SLC44A1
SLC35E2B
GAPDH
SPRY4
BCAR1
KLHL12
NSFL1C
NUP107
NOTCH2NLC
COX5A
TSSK6
NDUFA13
MRPL38
MAPK1IP1L
METTL9
TAMM41
ZBTB37
CLUAP1
C16orf90
USP3
NDUFA12
TMED2
NKIRAS1
RPL15
RUVBL1
CDKN2AIPNL
NCBP3
SLC25A32
DCAF13
NOTCH2NLB
TSPAN10
NPLOC4
CDK2AP1
TSC2
NTHL1
MTIF2
HEXIM1
TVP23B
MRPL58
ELAVL3
KRR1
DDX1
ANP32E
PRKCE
MED18
DCAF10
IQCH
AAGAB
USP4
PEX14
DFFA
RPS3
WDR24
DNAJC24
DCDC1
UBOX5
FASTKD5
ITPKC
COQ8B
GALK2
COPS2
AGK
SLC25A51
KANSL3
FER1L5
YWHAZ
SNRPE
TTC1
SNRPB
HEATR1
PPRC1
INTS1
NMNAT1
LZIC
ARL14EP
PHLDA1
KDM8
PEMT
CIAO3
NLE1
H4C5
SOAT2
ADPRHL1
IGFBP6
ZNF212
PCID2
CUL4A
SACM1L
NFE2L2
ID1
SEC16B
PSMD11
WASHC4
RPS28
NDUFA7
VPS25
POMP
UQCC1
SLC20A1
ACTN1
STARD4
MRPL53
PTEN
KLLN
MAT2A
INTS5
ITFG2
RINT1
H4C4
METTL15
KIF18A
VPS4A
TTPAL
USP30
DPY19L4
H3C8
H2BC10
SNAPC5
MRPL1
AAR2
PSMD9
HPD
CALM2
CCDC88A
R3HDM2
INHBC
H2BC8
H2AC8
NUP153
H4C2
H3C2
MBTPS2
PANK4
HES5
ZSCAN22
TOR1AIP2
TOR1AIP1
MRPL19
YARS1
S100PBP
CCDC15
ASB6
LONP2
ABCC11
EIF3E
MICALL1
ST3GAL2
UBL7
ATP5MF-PTCD1
ATP5MF
NSA2
GFM2
RHOT2
BCL3
RAD23A
AP5Z1
ANGPTL4
POLR2J3
PRKCSH
CCDC151
SSNA1
ANAPC2
TTC4
VTA1
NMBR
ADNP
DDX59
ZBTB40
PLEKHB1
ZC3HC1
TMEM242
COIL
UBA2
PDE8A
ARL2BP
FBXO46
MEIOSIN
CCAR2
C8orf58
ZCCHC4
WIZ
CREBL2
WASHC2A
BUD13
RMDN2
H4C9
EEF2K
TRMU
FBXW2
ANXA2R
CALM1
ALDOA
EPHA3
SPRY2
ELAVL2
BANP
TTI2
HDGF
H4C3
H1-6
MRPL40
HIRA
ATXN2L
CCDC174
LZTR1
ELK4
H2AC4
ZNF594
VPS33A
GORAB
SLC25A13
SNRPB2
NCOA3
GARS1
ARID2
SULT6B1
FRMD8
SLC25A45
PRRG2
NOSIP
TMEM199
POLDIP2
PPIP5K2
GIN1
PARK7
SLC35E1
ZNF3
CHD1L
DPH7
NRF1
GOSR1
PRKAB2
MRPL10
LRRC46
MACROH2A1
B3GAT3
TRMO
OGT
H3C12
H2BC17
H2AC17
H3-2
PSPC1
RPL27
LSM12
G6PC3
STAT1
TRMT61B
BBS1
GOT2
PA2G4
SLC35E2A
TRPC4AP
ATR
H4C8
AP3B1
TRIM62
WBP1
INO80B
TIMM22
CATSPERG
SMG7
NECAP2
RPL10
COL16A1
ZMPSTE24
SLC39A13
KIF15
KIAA1143
LDAH
DRAP1
C11orf68
ECSIT
ASB2
CSNK1G3
TCHP
MTMR2
E2F6
NUP188
DOLK
ALDH7A1
TSNAX
TEFM
PARP2
CCDC125
TMEM101
UCHL5
RO60
KLHL20
ZSCAN25
CDK12
RNF168
ZNF106
SNAP23
RHBDF1
WWTR1
DHRS3
LRRC52
MRPL24
PAFAH2
ZNF26
AP2B1
MRPS31
SRRT
MFAP3
FAM114A2
ERLEC1
ASB3
ZNF770
DISC1
EXOSC8
ALG5
IFNAR1
TMC1
CALR3
C19orf44
TMEM79
SMG5
SH2B1
TUFM
NOTCH2NLA
PDE12
TAS1R1
NOL9
CASC3
BFSP1
CT45A9
CT45A8
CT45A2
MRPS15
VPS72
EPRS1
POLR3E
C1orf53
KEAP1
PRCC
PPP6C
COG2
ZC3H10
RPL41
FAM149B1
ECD
SEC22B
AGMO
SART1
NFKB2
USE1
SYT5
LRRC59
AP1G1
H2BC11
H2AC11
BCAT2
TSG101
COPS6
RRP9
PARP3
ZNF185
EIF3H
CENPBD1
LIMA1
AMOTL1
TUBB1
USP48
GID4
ATPAF2
RPS3A
ZNF721
PIGG
LRWD1
ALKBH4
IPO4
MRPS14
NME6
TNFSF14
COQ5
PYGB
AXL
FBXO38
ZNF668
ZNF646
PCBP2
SAMD10
PRPF6
CNOT2
SRSF7
MUL1
PMF1-BGLAP
PMF1
TPT1
SPATC1
NAGK
TESK1
BCAS4
KRT18
CHMP4B
DDX23
COX7C
RPL29
AQR
DR1
NOC3L
AVPI1
FOSL1
ABCC3
NDUFS7
FANCD2
PPID
LENG8
NANOS3
H2BC4
H2AC6
AMACR
PRDM5
IPPK
SLX1B
SLX1A
BOLA2B
BOLA2
SASS6
TEKT2
ADPRS
COMMD1
MCOLN1
DDX46
RUSF1
FOXO3B
TOB1
ATP6V0D1
AGRP
HNRNPU
DUSP6
ILF2
SMIM14
ILVBL
TFB1M
LRATD2
VPS37B
ZP4
SCRIB
STIP1
PRDX1
PGLS
TTC32
OCEL1
DPY30
HTR5A
ARTN
CCDC124
GPS2
CBX5
HNRNPA1
BRMS1
B4GAT1
TSR3
GNPTG
NOTCH2
GPAM
SPRED2
H3C10
H2BC14
H2AC14
ISLR
TOP3B
ARL8B
NOL11
TRMT6
MCM8
SEC14L1
COQ9
CIAPIN1
MRPS24
PPP4R3A
RFFL
WDR13
C1QTNF3
SMIM38
ING4
TOMM22
THOC5
STYXL1
VPS28
SEC11A
LDHA
RPL7
RDH10
ATRN
NFIB
FGFBP3
COPS4
S100A13
CHTOP
TMEM126A
PRR19
PAFAH1B3
FAF1
HSPA8
ZNF697
TMPRSS5
PIGU
RAD52
TFRC
CWF19L1
H2BC13
H2AC13
MAML3
CSRNP1
FHL2
TNFRSF6B
PNPLA6
USHBP1
BABAM1
RPTOR
STOML2
TIGD6
HMGXB3
ARID3B
MPHOSPH10
MCEE
TEX261
AAAS
TOMM7
SCO1
ADPRM
TRIM46
KRTCAP2
FEM1B
STT3B
RIN1
SNX17
EIF2B4
ZNF350
RPS6KB2
CSDE1
HSPA9
EEF1A1
MDN1
C16orf72
DMTF1
KXD1
DBR1
DSN1
OTOA
YJU2
BMS1
LMNA
ARHGEF7
PKIG
TRMT10C
ALG14
SRSF10
NUCKS1
CSTF1
AURKA
ARHGEF12
MSANTD2
TRNAU1AP
NCOA7
RASA3
TP53I3
ENTPD2
SMN2
SMN1
ZNF148
NDUFAB1
DNAJB12
RPL24
WASHC2C
HIPK1
C11orf49
INAVA
PARN
BFAR
MRPL4
ANKRD13D
ZNF410
MNAT1
ADGRG1
NEURL3
COPS7A
RBM28
VPS35L
CLUH
TDG
RPL7A
MED22
RAD9A
ICE2
TMEM223
TMEM179B
AGL
CA5A
ADORA2B
FAM228B
SF3B6
FAM168A
CEP350
FAM187A
SMIM12
EFTUD2
CCDC103
RFC2
MRPS21
MRFAP1
ISG20
CYB561
DYNLRB2
LRRC49
PLK2
THAP10
ZNF512B
C19orf53
TMEM208
LRRC29
PEX3
ADAT2
RPL38
AP5S1
CCT4
DCAF8
TRMT1
NACC1
NUP133
H2BC7
RPL30
H3C4
H2AC7
MAD1L1
CAMKK1
SUMF2
UBE2R2
RAB7B
FRG2
CUEDC2
FAM89B
ZNRD2
ADAR
ZNF518A
MAZ
FAM200B
KIF21B
SH3TC1
TMEM62
SLC12A2
UQCRB
EHBP1L1
FURIN
CASZ1
PNKD
AAMP
LUC7L
MIA3
KPTN
SRFBP1
EIF3L
ANKRD54
ZNF658
TOB2
TMEM168
PUM2
PDE6A
GTF2H4
PEX12
TIMM23
SPRYD4
LSM5
AVL9
SLC26A2
ZSCAN30
PICK1
CCDC43
MAP2K2
LOC112694756
SPRED1
ADAM15
KCTD5
HIRIP3
NOL7
ZNF696
EXOSC6
TAF1B
CXXC5
PGS1
SUMF1
SYTL2
ATAD5
BTBD1
C8orf37
UQCRC1
MED12L
FCRLA
TSSC4
EIF3C
EIF3CL
PURB
GRPEL2
POLR3D
THEM4
SCAP
TPM3
GNB2
QTRT1
JUNB
HIKESHI
CLTC
PPP1R15B
DYM
RCC1
METTL2A
ATAD2B
AATF
C11orf65
ADK
KDM4C
ITGA3
OR2L13
OR2AJ1
CT45A7
CT45A6
CT45A5
STAU1
SLC25A19
SPATC1L
DDX18
COX7A2
TPK1
RAF1
DDX50
DDX27
MEMO1
SH3TC2
GRB7
KRT28
RPS13
ZC3H6
CYCS
CGGBP1
C10orf88
MGST3
SLC3A2
PSMD6
HINT3
C3orf38
RPL10A
NFIA
GAL3ST4
RPL22
RFX1
NUP214
SOS1
GPATCH4
THUMPD3
TXNDC15
WASHC5
NSMCE2
H2AX
ZNF846
LGALS1
GGPS1
ARID4B
TPR
ODR4
SNF8
HIF1AN
DNAJC25-GNG10
DNAJC25
TRDMT1
GATAD2A
TAF13
BRF2
ZNF589
PRR25
YTHDF2
DHPS
RANBP6
SCAF11
FZD1
H2BU1
H2AW
MAP2K3
DCPS
CEP78
LEPROT
LEPR
UPF3A
FBXO27
UBA52
INTS4
C1orf54
APH1A
GET4
GAPVD1
TSFM
UBR4