ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

SRSF7
HEXIM1
JPT1
SRSF2
MFSD11
JUN
ZBTB45
TRIM28
PPM1D
CDC25C
FAM53C
H3C15
H3C14
H2AC19
H2AC18
ZBTB4
SLC35G6
POLR2A
RPL5
RPL3
NGRN
H4C15
H4C14
RHOB
ID4
ILF2
C15orf39
EIF4G2
CIRBP
HNRNPAB
TUBA1B
FUS
SFPQ
PIK3R3
HSPA1B
C12orf65
BCAR3
TAF4
THADA
KLF6
TRA2B
SRSF6
POLG
H1-10
EEF1A1
RSRP1
FARSA
CALR
PPP4C
ATF4
ZC3H10
RPL41
RSPH3
RPLP1
JUND
PRDX1
UNK
H3-3B
EIF4A2
CDH11
SND1
SLC38A2
ZBTB37
RCC1
COQ8A
NCOA7
DDX5
HNRNPH1
INTS6
DUSP1
YWHAE
SOD1
TPI1
GTF3C6
RPS14
GTF2H5
SRCAP
LOC730183
RPL13A
TRAF7
HNRNPA2B1
CBX3
TMEM242
SETD5
KCTD13
INTS2
WDR1
GNAI3
SIRT4
SESN2
COQ2
FAM219B
SEPHS2
PABPC4
GBA
RPS8
H2BU1
H2AW
KNTC1
ECI1
NUP133
CITED2
EIF4A1
TFRC
UBB
EIF5
FBXL3
RPL11
EEF2
NKIRAS1
RPL15
DNTTIP2
BTG3
CZIB
AAAS
UBE2S
RNF151
RPS2
PIP5K1A
ACTB
NOL11
NASP
STMN1
ZNF143
DLG2
CBX5
HNRNPA1
SNRNP48
FSCN1
MRPS18B
ZBED8
OAZ1
E2F3
CALM2
LTA4H
MYLIP
MTRNR2L1
SRSF1
SLFN11
MAT2A
BAMBI
IDH2
TOB1
SMOC1
RBM26
TP53BP2
PRRC2B
C19orf48
SRSF5
SPECC1L
RNF220
POLE4
S100A13
CHTOP
SCAMP2
NDUFV3
RRP1B
HSF2BP
MAPT
LUC7L
RPL6
EFCAB2
PPIA
NFYC
HMGN2
TUBD1
RPS6KB1
NOP14
GRK4
C16orf72
TUBB4B
SIPA1L1
DPP9
SF3B4
PSRC1
HSP90AA1
HSDL2
WDR74
SOD2
WTAP
TMEM107
ITFG2
DDX17
SLC1A5
UBC
EIF1
B4GALT3
ARIH1
MTHFS
ATP5PO
NUP214
NABP1
TBCE
RPL31
PSMC6
TSPAN3
POLR2J3
KIF5B
RPL19
CACNB1
MTHFD2
ABCA5
LUC7L2
FMC1-LUC7L2
FMC1
LSM14A
LOC105378979
LAP3
BBC3
TIA1
HINT3
RBM12
CPNE1
ALOXE3
HES7
DEGS1
MKNK2
MESD
HSPA5
DGCR8
DCPS
GADD45A
XBP1
MCMBP
ALDH3A2
MTRNR2L2
MSH3
DHFR
CHRNA5
MORC3
DYNLL2
ZDHHC4
RPS15
YBX1
LIN9
FAM200B
BTBD10
SDHAF4
HEXIM2
WRAP53
TP53
DCAF8
RAB11A
UGP2
SRSF3
VAMP1
UGCG
DHX9
EIF4A3
PKM
AFF1
TRAF4
DLX1
SRRM2
GDI2
H4C1
H3C1
H1-1
CDK1
TGOLN2
AMD1
AGL
FAM71E1
EMC10
OAZ3
MRPL9
ALDOA
NCL
ACTRT3
CHEK1
C1QTNF6
TAF1D
C11orf54
RPP25L
CFAP20DC
ACAD9
CALM1
SACM1L
MCL1
TM2D3
GLUL
DHRS12
RNPS1
ALDH7A1
SNX3
TAF15
H2AX
TAOK1
ZNF771
ESR2
YWHAQ
ULBP1
YWHAG
RBM25
KLHL11
SMYD4
RPA1
PHF10
FZD8
C6orf62
COMMD4
GGA2
RNF122
ZNFX1
MTF2
THOC3
GORASP2
HDAC1
TRA2A
BLOC1S5
IMPDH2
BORCS5
KLC1
ARPC1A
HNRNPDL
ENOPH1
RCBTB2
NCOA5
CENPH
PARP16
USP10
ASCC1
ANAPC16
MSH6
LRIF1
H2AZ1
DNAJB14
WBP11
C12orf60
RBBP6
ID2
HSPA1L
HSPA1A
TXNDC15
NCAPG
RNF146
MAPK3
RPL37A
POLR3E
PMF1-BGLAP
PMF1
LENG8
GANAB
MICU2
PSMA3
MAP3K21
CEBPA
NUDT1
MRM2
TMED4
SPTAN1
MTRNR2L8
H2AZ2
UFL1
TSC22D2
BRD2
ATP1A1
NFKBIL1
ATP6V1G2
NXF1
DDX39B
IER5
AMZ2
ZSWIM7
TTC19
MSX1
BCLAF1
IFIT3
RPSA
USP1
ADPGK
SP1
HERPUD1
GGPS1
ARID4B
RPL24
CDK12
DYNLL1
SRSF9
TEX30
SOAT1
SLC22A4
HDHD3
RPL22L1
PUM2
SLC20A1
CLSPN
HFM1
BUB3
NGB
EXOSC9
MTF1
PUM1
EPC2
WDR35
HACD3
ING3
NEK4
MTMR2
EZR
RGPD2
RGPD1
PTPN6
C12orf57
FDXR
PCIF1
ATF3
CKB
UMPS
RPL13
ADAM17
ZWILCH
RPL4
HMGB2
UCHL1
TRIM7
PPP6R2
MESP1
VPS72
DNAJC25-GNG10
DNAJC25
TCTE3
ERMARD
CLN5
GLS
LRCH3
MANF
RPL10A
SLIT2
ISL2
FTL
IL4I1
NUP62
ATF5
ZBED4
INTS7
DTL
DNAH14
NDEL1
PPY
PHGDH
SEC31A
HINFP
MRPL17
ARF6
DDX19B
AARS1
RTL10
GNB1L
THAP9
TMEM63A
RPL29
PABPC1
KANSL2
DPY30
THUMPD2
FBF1
ZNF830
CCT6B
DMWD
UBA2
EPC1
TARS3
PRMT2
ANKRD13C
CSNK1E
TSNAX
TTLL12
TUBGCP3
PMPCA
ENTR1
SIL1
DDIT4
MAN2C1
HSP90B1
ZCCHC17
SNRNP40
ZBTB25
ZBTB1
CBY3
MFSD14A
RPAP2
GLMN
SLC16A1
BOD1L1
HIRIP3
HNRNPR
PCBP1
CHIC2
ZMYM1
HOXD13
TLE3
ADAMTS1
COX20
PIGF
CRIPT
GNA13
TMSB10
CSRNP2
RPL12
LRSAM1
CD164
EXOC7
RAP1GDS1
BPHL
MSRB2
TUSC1
RPS7
PRADC1
CCT7
COMMD6
FASN
TMEM39B
DNMT1
ZNF627
YWHAH
MRPS21
PELP1
BTG1
ZBTB2
ZYG11B
FTH1
RPS19
ATXN2L
SLC25A3
ZKSCAN2
NUP188
DOLK
HSPA8
DHX15
CASP3
PRKACB
SLC5A3
MRPS6
RBMXL1
KYAT3
SLC35E2A
CYCS
CCDC137
POLR2J2
SOX4
POLR3B
EPM2A
LRRC37A3
PDSS2
RPL7A
MED22
ADM
PHF14
FAM89A
CPT2
MCM5
SETD9
ACTN4
PTMS
SLC25A19
C7orf25
TOMM20
AKR1A1
RBM34
ZNF131
USP25
TAOK2
URB2
TAF5L
MACROH2A1
PIP4K2B
MATR3
STT3B
ATP2A2
SLC3A2
SLC7A5
NEFL
KHDC4
TOB2
CANX
HES1
VPS37B
MIF
CANT1
SRP68
GALR2
ING5
PAN2
IL23A
SCAF4
FAM117B
AKAP7
MAGI3
MRPL40
HIRA
SLC26A2
NSUN4
TTC32
TEX14
RAD51C
USP38
GCN1
SLC25A4
YEATS4
SMURF2
HSPA6
MYL6
MED11
ARL1
IP6K1
DNAJB1
C22orf39
C15orf61
REEP5
CSDE1
ATXN7L2
SRSF4
PRPF38B
CDC20
GPATCH3
SAE1
ZFAND5
BORCS6
SUMF2
SLC33A1
TM9SF4
TBC1D22A
MCM7
AP4M1
COPS6
SZT2
MED8
CKS2
EZH2
PRDX3
SREBF1
SLC39A10
RBM8A
RPL9
LIAS
RNF149
RPL23
PPP1R8
H4C8
CLNS1A
ILKAP
OSTM1
NAV2
MPI
SMIM13
LUC7L3
ARL6IP1
MDM2
ADI1
BCAS4
RPS15A
NTMT1
NCKIPSD
RPS3
H4C3
H1-6
ERO1B
SLC35F5
DNAJC27
LDHA
TCAIM
TIPIN
GAPDH
USP24
RASSF1
NT5DC1
MOB4
TBC1D2B
LATS1
BCL2L13
SLBP
IFNAR1
CSE1L
TRIM13
CDKN2AIPNL
RANBP2
EIF3A
MBOAT2
PRPSAP2
SLC16A10
ZNF589
PSMG3
C21orf91
MAP3K3
UCHL3
KEAP1
NARF
PPP1R27
MCRIP1
STIL
OLA1
TRIM65
ANKRD31
UHRF1BP1L
DCAKD
RPLP0
PYCR2
PRPF4
CDC26
ZDHHC14
MAP4K1
EIF3K
THNSL1
NSRP1
FOXO3
UBE2Z
PARN
BFAR
ZC3H4
MEF2A
GTF2A1
ACACA
TADA2A
SLC25A11
RNF167
NDUFS7
H2BC21
H2AC21
H2AC20
XPO1
HACL1
BTD
ENO1
BMP2K
TBC1D4
ALG6
POLE3
C9orf43
UBAP2L
C1orf43
IREB2
CARS2
BLOC1S4
POU4F1
SEC14L1
THOP1
SGTA
SNRNP70
USP39
C2orf68
CD320
GABPB2
EIF3L
ANKRD54
MRPS14
ZSCAN12
PPP6R1
NBPF1
SQSTM1
H4-16
H2AJ
HASPIN
SMARCC1
TMEM116
ERP29
ENAH
NUCB2
NAXE
UGT1A3
KMT5B
TNRC6B
SELENOW
PCDH9
PITRM1
ARL15
FARP2
LZTR1
C10orf143
RACK1
SRRM1
DIS3L
TNKS2
IPO7
SP2
TOE1
MUTYH
FBXW2
MSTO1
LYPLAL1
ZNF326
ANXA11
HEATR1
FAM133B
MRPL35
IMMT
CNOT11
PMPCB
NPM1
SF3B1
PCGF6
MVK
PSMA4
EXOSC10
ZC3H6
MRPS15
ADIPOR2
SPRYD3
MAP2K2
DIP2A
RPP38
HYLS1
GEMIN4
TRIM26
VIM
CCSER1
RNF130
TBX2
MRPL39
BTBD1
OSCP1
DDX6
VARS2
RNF135
SIN3B
TIMM44
TRAP1
HMGN1
ZNF574
MUC1
TIMELESS
VPS36
CKAP2
RPS13
RPS27
RAB13
RBSN
NUCKS1
HNRNPU
PRRC2C
ZFP36L2
UBTD1
MMS19
HNRNPD
MYDGF
TRIM25
CSK
MICOS10-NBL1
MICOS10
TNFRSF10B
TMX1
CWC25
CDC6
THAP6
RPS24
POLR3A
INTS3
RPF2
ZNHIT6
CDR2
SLC25A36
ZNF839
GPX4
SNRNP25
POLR3K
TXN
PPP1R12C
USP48
C2orf42
FAM162A
CCDC58
SIRT1
RPRD2
TNIP2
PCMT1
PRMT5
RASA2
C16orf95
FER
PUS7
AUH
WNK1
PTBP1
TNPO1
PSTK
TPRA1
ZNF282
MCM2
ZDHHC7
TARBP1
RNF19B
KAT7
METTL23
JMJD6
NRDC
TMEM128
KNL1
BSG
SERTAD2
ZNF565
ZNF146
POLD2
STRAP
SMARCB1
CCNL1
RAD52
JTB
MAP2K7
RPL27A
SLTM
SCN11A
WDR48
RFWD3
TMEM50B
USP40
RNF10
STXBP4
COX11
ZBTB24
NETO2
NELFCD
PARK7
XRCC5
UQCRH
LRRC41
CCZ1B
DNAJC9
COIL
AUNIP
B2M
HACD2
TCERG1
ANGEL1
EEF1E1
PIM3
RERE
MPV17
SELENOT
UPF1
TXNRD3
CNKSR3
WBP2
DR1
RPL17-C18orf32
RPL17
MPZ
MGAT1
SDHC
STARD7
TECR
DARS1
KIF23
YLPM1
CTH
PFKL
RBFOX2
CGN
FDPS
RPS12
ZNF84
LNPEP
GNPAT
C1orf131
CYP51A1
MARCHF7
RPS10-NUDT3
RPS10
H3-3A
PDHB
CPD
MRPL3
CCDC88A
HLCS
PHIP
HNRNPA3
SGK1
RBM4B
PDCD4
PTPN18
TIMP3
AKIRIN2
H4C5
ADSL
TMED7-TICAM2
TMED7
C5orf34
RPAP3
RUFY1
CNTLN
SET
SDF2L1
TBP
PSMB1
STK11IP
GALNT2
COP1
NOP2
SYNCRIP
TNNC1
NISCH
MAFK
CALCOCO1
MRPL53
SSU72
SGF29
ELAC2
ZCCHC9
PSMB2
DDX59
H2BC12