ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX327759 | MM.1S
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◣ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

IFRD2
HIKESHI
TMEM115
PHB
CALCOCO1
CALR3
C19orf44
SMPD3
TCEA2
CLPB
TMTC3
CEP290
INVS
ERP44
UCKL1
PAFAH2
PPRC1
ST3GAL2
MMACHC
CCDC163
BOD1
PNKD
AAMP
AHCYL2
SCNM1
LYSMD1
SLC39A1
CRTC2
LARS1
ODF3L2
ORMDL3
STAU1
CCP110
GSPT1
AP2S1
PANK4
HES5
CHMP4B
TSNAXIP1
RANBP10
PPP1R12B
GFUS
NUDCD1
KBTBD7
SYMPK
FOXA3
ZNF189
MRPL50
MRPL24
C16orf91
NTAN1
ZNF225
PPP1R12C
KBTBD6
SCRIB
TNFAIP1
IFT20
DDX23
BTRC
ZFYVE28
CFAP99
CTU1
TSSC4
TTC13
SNX17
EIF2B4
CLEC16A
DEXI
C1orf159
PEMT
MED15
UBQLN4
LAMTOR2
FASTKD1
GATB
MICOS13
HSD11B1L
PHF12
MAD2L1BP
GTPBP2
SLC35B4
BOLA1
CNIH4
ZNF749
UBAC1
NUDT13
VCPIP1
C8orf44-SGK3
FEM1A
ING4
UNK
H3-3B
TSC2
NTHL1
TIMM21
FBXO15
SCAF1
RRAS
CBARP
ATP5F1D
SIRT2
NFKBIB
TMEM127
CIAO1
TFEB
TMEM59
WDR87
SIPA1L3
ZNF444
RPIA
WNK1
CCDC146
NDUFS2
ADAMTS4
ZNF56
AP2M1
NPRL2
CYB561D2
BANP
TTC33
OSCAR
NDUFA3
NOP14
GRK4
SLC4A2
CDK5
DYNC1I2
C19orf53
COX7C
PHF13
JOSD2
ASPDH
SMARCAL1
RPL8
ZNF34
TRAK2
STRADB
ZNF169
ZFYVE19
DNAJC17
ABCF2
CHPF2
ZFYVE1
SNX27
RNF151
TBL3
CTF1
BCL7C
SMUG1
TRAPPC3
PRCC
RIC8B
BUB3
NFXL1
DSTYK
TMEM208
LRRC29
TMEM70
ELOC
STK25
ZSCAN22
THRAP3
LETM1
CCDC174
PEX14
DFFA
HTRA2
DQX1
TFPT
PRPF31
ING3
GTF2H4
WDPCP
MDH1
FBXW11
VPS50
HEPACAM2
USP48
ZNF337
ZNF235
TTBK1
CAPN15
ZNF384
TMEM102
FGF11
TMEM101
GPANK1
CSNK2B
LY6G5B
C6orf47
UFSP2
C4orf47
ZNF420
CTDP1
ZNF350
CCDC150
EMILIN1
SOX6
C11orf58
GPKOW
AURKAIP1
DESI2
ATP5PO
ZNF37A
RPS7
CLP1
RABAC1
UBR2
SERPINI1
PDCD10
BUB1B
CNOT1
MYLK4
WRNIP1
LMNB2
DCAKD
NMT1
PSMD11
CCDC90B
RPGRIP1L
FTO
SDCCAG8
CEP170
ZNF747
ZNF224
SSBP1
RBM6
RAB1A
CHCHD3
NUP153
SUFU
ACTR1A
ZC3H11A
ZBED6
TRAF7
PEX26
ZNF133
PDE6D
COPS7B
RPS20
B3GALNT2
INTS1
ZNF230
DDX49
COPE
SEC61A1
CDK5RAP2
RPS6KB2
TIMM13
KMT2B
PRR14
MARS1
ARHGAP9
AKIRIN2
FBXO46
MEIOSIN
SLMAP
MED27
PTDSS2
TMEM43
CHCHD4
INTS9
HMBOX1
THYN1
ACAD8
UCHL5
RO60
IPPK
TRIP10
GPR108
PNPLA6
ZNF554
TTC1
TOR1AIP2
TOR1AIP1
KAT7
CLDND1
PSMB4
POLR2E
NCDN
KIAA0319L
CWC22
RALBP1
ZNF2
PSMD4
FBXL19
GPAA1
EXOSC4
C19orf67
MGRN1
CNOT4
ZNF484
ZNF32
PRRG2
NOSIP
ZNF354A
NCLN
SCAMP4
ADAT3
PANK3
ZNF419
RALGAPA2
ZGPAT
ARFRP1
UBL7
SPHK2
RPL18
FAM83E
TXNDC9
EIF5B
FBXO48
APLF
FAM193A
MXI1
ZCCHC4
FDPS
PA2G4
ZNF227
SEC11C
RANGAP1
SNX1
CIAO2A
FHIT
VIPAS39
AHSA1
TMEM160
PHF23
GABARAP
DVL2
ZNF547
TRAPPC2B
MED11
STK17A
ENOX2
WAPL
BICD2
LEMD2
ZNF527
RPS27
RAB13
WDR97
MAF1
RAB5C
ZCCHC8
PHB2
VPS4B
EXOC4
LUC7L
RPS3
MAX
ZNF140
UTP11
ZNF17
VAPA
CRK
ZNF226
WBP1
INO80B
YPEL3
TBX6
TMEM69
GPBP1L1
ZW10
EMP3
RAB29
MRPL20
FAM185A
SLC25A19
COMMD9
PTBP1
ZNF805
NARS1
LTA4H
WDR46
PFDN6
CDK8
TNFRSF12A
THOC6
HCFC1R1
ZNF862
RPL18A
CDCA8
C1orf109
SCYL3
CDC25C
FAM53C
DGAT1
AQR
PSENEN
LIN37
PSMD2
ASXL1
GINS3
DDX47
RACGAP1
PCM1
SLC17A7
ZNF343
CA11
CXXC1
PGBD4
EMC7
RPL23A
RAB34
RAB30
METTL26
NFKBIL1
ATP6V1G2
NDUFB5
MRPL47
GPR137
METTL3
ZNF773
SNRPE
WBP2
IGSF8
CIAO3
COPS8
OPA1
SSR2
CAND1
GID4
ATPAF2
MUS81
CFL1
PIGU
SSR3
RPS26
BIRC5
KATNB1
CNOT6
TMEM186
PMM2
ZNF277
DOCK4
MORF4L1
PSMC4
MITF
ZMAT5
UQCR10
ABRAXAS2
AHCTF1
ZNF26
DUS3L
CCAR2
C8orf58
PES1
RPL34
USP31
RBL1
TOR2A
TMEM94
ATP6V0B
DPH2
SEPTIN9
PPP1R13L
POLR1G
TRUB1
WDR53
FBXO45
EIF2S2
TLE3
TERF2
CLPP
WIZ
FAM228B
RPS13
SF3B6
PSMB6
USP35
KCTD21
BDP1
TPGS1
L3MBTL2
SLC50A1
DPM3
VRK1
ZNF451
ZSCAN5A
TMEM245
ZNF628
THAP1
CDK9
ZNF436
RAB7A
CAPN10
DPP9
TRABD
HSPA13
ZNF584
ZNF586
OAZ3
MRPL9
ZNF500
RNASEH2C
SUCLG1
RWDD1
NOLC1
RETSAT
DOHH
SESN1
CEP57L1
MED23
PRKCI
SYPL1
ZNF776
HSP90B1
NOP53
CWC25
GEMIN6
FCSK
ABCC5
EIF1B
NUP205
B4GALT7
ZNF585A
RAD51AP2
SHLD1
DCP1A
SYNGR4
TMEM199
POLDIP2
STMN3
RTEL1
FBXL18
NUF2
ZNF25
TRMT1L
SWT1
USHBP1
BABAM1
POLRMT
ZBTB7A
RPL12
LRSAM1
KHDC4
CSRNP2
TBC1D17
AKT1S1
QTRT2
CCDC191
PRKCSH
CCDC151
BOD1L1
SNAPIN
ZNF764
GFM1
CARS1
EML6
KPTN
PPP6C
SUGP1
MAU2
CFAP410
ACLY
LSG1
CNPY2
TOR1A
RPP40
GGPS1
ARID4B
UBE2Q1
CAPG
SH2D6
TOMM22
KBTBD8
C12orf43
CCDC124
XPOT
RANBP1
TRMT2A
ZNF599
IPO8
SCAMP3
ZSWIM9
LIG1
MRPL54
APBA3
MED24
ZNF317
SF3A3
DNAJC28
ZNF416
ZIK1
FAM222A
UBE2V1
TMEM33
DCAF1
ZNF221
ELP6
RBBP5
SKIV2L
NELFE
RPL37
ZNF567
ZNF548
RBL2
KCTD5
RAB3C
SEL1L
HIRIP3
SLC33A1
SLX1B
SLX1A
BOLA2B
BOLA2
TSN
TMEM109
UBA52
SMN2
SMN1
CCNT2
ZNF446
ATP5MF-PTCD1
ATP5MF
INTS4
NME1-NME2
NME1
ADSS2
TMEM230
ZNF605
COG2
BET1
TMED9
ZBTB45
ILF3
VEZT
FGD6
STRN
TUT1
GALM
THAP11
NUTF2
CENPT
GSK3A
BOLA2-SMG1P6
ARMH3
YIPF2
TIMM29
CMPK1
GALK2
COPS2
ZNF180
ZBTB7B
MACC1
CHCHD6
SMIM13
WASF1
CDC40
IPO7
FBXO38
PPP2R5B
OSBPL11
SLC38A9
FAM149B1
ECD
FAM168A
NDUFS7
CCDC117
SERP1
EIF2A
ZNF268
MEN1
SNRPB2
EIF3C
EIF3CL
SETMAR
ZDHHC16
EXOSC1
NUMA1
LRTOMT
SETDB1
NKIRAS1
LRFN3
RPL15
SASS6
REXO1
PRAF2
ZNF45
ZNF550
NCBP2AS2
NCBP2
CCDC77
CACTIN
THAP4
ATG4B
SAMD10
PRPF6
EIF3F
PRPF4
CDC26
YJU2
C15orf40
TSACC
CCT3
TM9SF4
C1orf54
APH1A
RPS3A
SKP2
LMBRD2
TXNL4B
DHX38
BRIX1
DNAJC11
DAZAP1
CLINT1
WDR18
COPS7A
RAB8B
NR6A1
YY1AP1
DAP3
ESCO2
WDTC1
TIMM22
MVB12A
ZNF304
SH2B1
TUFM
MTR
DEDD
DARS2
CENPL
DNM1L
ATP13A1
ZNF101
SDF4
B3GALT6
UBA1
ZC3H10
RPL41
TMEM88
NAA38
CYB5D1
ADO
IFRD1
SF3B2
GAL3ST3
SHPK
CTNS
POLR2J3
GPT2
EIF3D
JRK
LRRC47
NSA2
GFM2
SART1
NMNAT1
LZIC
TOGARAM1
KLHL28
AP2B1
DHX8
VKORC1
VAMP7
ZNF614
AKAP8
POMZP3
TSPAN4
POLR2L
UFD1
CDC45
SZRD1
RPS19
NOP16
HIGD2A
PNISR
ZNF211
ZNF721
PIGG
ZNF417
PGAM1
PEX12
RBM41
DHX33
PSMD10
ATG4A
TSNAX
MRPS15
ZNF155
SUPT5H
GPS2
KNSTRN
HEXIM2
MRPS16
DPM2
PRPSAP1
TMEM147
PSMD3
PCNX3
MAP3K11
TSNARE1
IPO13
SLC39A13
ARHGEF1
ZNF530
RNASEH2A
PRDX2
LRPAP1
STX10
IER2
MAMSTR
NR1H3
ACP2
UBE4A
N4BP2L2
CACYBP
ZSCAN32
ZNF174
PSMA2
MRPL32
PPIP5K2
GIN1
SAP30
CEP350
PUS3
DDX25
PPP1R11
UBXN6
ZNF324B
ALG10B
ZNF165
HSPH1
CCNL1
TRUB2
COQ4
TTLL11
METTL18
C1orf112
UCK1
NAPB
NEDD8-MDP1
NEDD8
GMPR2
ZNF79
CUEDC2
UBE2N
HSCB
CHEK2
FBF1
PARK7
WASHC3
MIA3
SNIP1
DNALI1
SLC37A3
PSMC5
FTSJ3
STX16
CDC34
ALG10
CTNNBL1
MRPL21
IGHMBP2
PRUNE1
MINDY1
R3HDM1
ZRANB3
UBE2J2
COA3
CNTD1
RPP30
PSMC3
PURB
NUP214
SSNA1
ANAPC2
TMEM79
SMG5
ITPR1
ATE1
SPC25
SLC25A44
TMEM222
MRPL19
ZNF684
DHX30
CPEB3
MARCHF5
JTB
PTRHD1
CENPO
ZNF181
IQCH
AAGAB
MEA1
KLHDC3
SERBP1
ARPP19
TTC31
CCDC142
TEKT2
ADPRS
RPL29
DNAJC14
ZNF565
ZNF146
STPG3
NELFB
MON2
CD2BP2
ANGEL2
PCBP2
KLHL20
TARDBP
RPL27
ZNF460
TMEM129
TACC3
TIPRL
ACP6
MTMR9
EXO1
FAM32A
CCDC59
HDGF
TMEM258
FEN1
C18orf25
ZC3HC1
SLC30A6
C8orf76
SEC13
TTC30A
EMSY
CCNC
HBP1
USP15
MYBL1
PSMF1
TMEM41A
CILK1
ZNF302
FBXO9
ZNF286A
DMAC1
PPP1R7
PASK
LRRC8A
KYAT1
OTUD4
SSU72
TMEM150A
REXO2
BLOC1S5
IQGAP3
TP73
WRAP73
TRMT10A
MTTP
RAD52
ATG4C
NDUFS3
KBTBD4
KLHL24
FARSA
CALR
RHOT2
TPR
ODR4
DYNC2LI1
FIS1
POGLUT2
BIVM
TPRKB
FAM207A
VPS45
MRPS22
CSNK2A1
WDR70
CCND3
TAF8
NFATC3
YWHAG
GAPVD1
GTF2I
MAP3K13
VPS35L
SHOC2
BBIP1
RBM22
RCAN1
ETFDH
C4orf46
C7orf25
GNG3
BSCL2
TOE1
MUTYH
ZNF688
SPEGNB
GMPPA
FAM193B
ZNF571
ZNF540
ELOB
LSM10
ERI3