ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

PAXBP1
FRG2
PMF1-BGLAP
PMF1
NPNT
TINAGL1
SLC39A14
COL23A1
ZMYM3
FRG2C
KCNIP4
CMSS1
FILIP1L
LRP2
TTYH1
COQ8A
PLA2G7
BAIAP2L2
TNRC6A
NBPF1
EPN1
SYT2
ITPRIP
ARHGEF35
POLN
HAUS3
SPDYE14
SPDYE10P
SNX16
MAMDC2
CRYBB2
TSR2
LOC105370980
ARHGEF5
MTRNR2L2
MSH3
DHFR
ELMOD1
MTRNR2L8
LYRM1
DCUN1D3
NGB
CLTC
KRTAP9-6
ELAVL2
LOC107986453
CYP2A13
SLITRK3
SLC35F3
ZNF462
TES
OR5AP2
ITPRID2
EREG
PDE1C
LDB2
ERRFI1
CLDN20
KRTAP2-4
UBAP2L
C1orf43
RAPH1
MAGEA2B
MAGEA2
CSAG3
PDE6D
COPS7B
MTRNR2L1
SCGB1C1
E2F3
SRSF5
H3C13
H2BC18
TBC1D5
RABL6
SULT6B1
CEBPZOS
ANXA2
WASHC1
C11orf97
ACTB
DMBX1
FANK1
UBE2Z
SIMC1
H3C15
H3C14
H2AC19
H2AC18
ECHDC1
APPBP2
TMEFF2
SPATA16
SUV39H2
OR1F12
SHTN1
CTAGE8
CTAGE4
C13orf42
PDLIM5
RPL8
ZNF34
PCBP3
IQCF2
UBC
ARFGEF1
HMGA2
IDNK
COL6A1
CD163L1
AREG
RAB11FIP2
RICTOR
SLC25A32
DCAF13
TCERG1
ANTXR1
H2BC21
H2AC21
H2AC20
PPP2R5A
HNRNPA3
DSCC1
H3C12
H2BC17
H2AC17
STRIP1
YBX3
SLC35B1
SPATC1L
TOB1
BCL9
STK3
CPLX2
KRT19
SLC38A9
FBXO11
EGR1
UBR5
FLOT1
IER3
EIF3F
MFSD14B
CSNK1G3
BCKDHB
PCMTD1
FOSL1
LUZP2
MND1
NFE2L1
NCOA5
SLC25A3
CHEK1
ARHGAP39
RAB4A
USP25
HNRNPA2B1
CBX3
VCP
CTNNA1
TCF7L2
LRRTM2
MAML1
ADAM15
SMNDC1
NFE2L3
GALNT10
GOPC
NOTCH2NLC
SLC12A8
RMDN1
CPNE3
ZCCHC4
NOTCH2NLA
LMBR1
COMT
TXNRD2
DTD1
UBE2V1
NSFL1C
PCID2
CUL4A
SEPSECS
TCTE3
ERMARD
DR1
NCK1
UBE2O
AANAT
CADM2
RXFP3
GRHL2
ENTPD7
UBE2D1
MRPS26
GNRH2
ID1
TMSB10
ZFP36L1
RPL18A
ZBTB38
SLC16A5
PTEN
KLLN
UROD
HECTD3
BZW1
BRAF
CIB2
VWA2
XPC
LSM3
POLR2M
EEF1A1
SLF1
KIAA0825
TMEM71
PHF20L1
EPM2A
FAHD2B
DIRAS2
KRTAP2-2
GABRA4
SLC5A8
OR5V1
KRTAP2-3
TRIB1
SRSF2
MFSD11
CBWD5
CBWD3
SCGB1C2
FH
DUSP5
FRMD3
CXCL2
SEC61A1
PDXDC1
CBWD6
LRRC58
MTHFS
MFAP3L
WDR43
FAM8A1
H2AX
ZNF280D
CSNK2A2
MALSU1
CEP55
TRIM26
CCSER1
HMGB1
ZKSCAN1
HDLBP
SLTM
RMI2
FDX1
PPP1CB
CIBAR1
TMEM43
CHCHD4
SLC30A5
FAM149A
PCDHGA1
CLDND1
LRRC37A3
SRPRB
FAM160B1
MPI
FMNL2
TUBD1
RPS6KB1
C7orf26
RESF1
FAM120B
VANGL1
PHTF1
RECK
METTL7B
TULP4
PCDHB5
MRPS23
PARG
SCO1
ADPRM
NDUFAF6
SMC6
GEN1
OXR1
ZHX1-C8orf76
ZHX1
HERC6
FGGY
SLC35A5
CCDC88A
SGK3
HNF4G
RPS20
PSMC5
FTSJ3
SMARCD2
AFTPH
H2BC11
H2AC11
GRPEL1
CRPPA
ANKRD18A
EBPL
PSKH2
KRTAP10-12
NFKBIZ
DENND4A
GCFC2
PPARD
EXOC6
ENTPD6
FAM221A
CBR3
ZFP3
TMEM269
OGA
NOMO3
NOMO2
ATF1
SLC7A5
RCN2
FECH
CETN1
TTBK2
TRRAP
OSER1
DYNLL2
LOC100287896
LIPT2
HEXD
PPWD1
CENPK
CLN5
WDR1
ZNF800
CCDC200
FBXO34
RAD21
NFIB
MTAP
MAEL
ILDR2
KRTAP4-5
ITPRID1
RNF151
NDUFB10
ZFP91
LPXN
RPS2
LEPROTL1
SH3BP5
MAP11
PIN4
BFSP1
FA2H
ELOVL6
PRAMEF10
CPSF6
KLHL7
TTC5
H3-2
SEC63
PTPRA
KITLG
NCKAP1
GPD2
UMOD
PCDHB11
AK4
UBE2J2
WDR45B
USP36
EXOC2
LIG3
SLC20A1
PCLO
VPS36
CKAP2
SCYL2
DEPDC4
SNX9
KRTAP2-1
CHMP7
NFRKB
POMGNT2
EXT1
JMJD1C
H2BC4
H2AC6
EMB
ARRDC4
LRP11
MLLT3
CTAGE15
ABRAXAS2
SRRM2
PTMA
PET117
KAT14
TBC1D2B
EXOSC7
ZDHHC3
INO80D
SFT2D3
HOMER1
EIF3A
PRKAR1A
ZNF697
HSF1
BOP1
PANX1
SPG7
PAM
LOC100996750
KRTAP4-7
SYBU
NUTM2D
FAM207A
SEC13
RNASEH1
DDX59
NOCT
NXF1
IMPACT
TMEM268
RANBP9
TMX4
XYLB
ATMIN
SULT1B1
C3orf70
DYNC1LI1
SLC7A1
MYZAP
KCNS1
GCOM1
CYREN
TMED7-TICAM2
TMED7
UHMK1
FBXL4
NDFIP1
CLK4
LPGAT1
MAP3K21
GRK3
MLYCD
EGFR
PPP1R2B
PCDHB8
PCDHB7
ZSCAN25
TFRC
CKAP5
ZNF124
RAD23B
RWDD3
MYO5A
DEPDC7
CACNA1E
ZNF337
DUS1L
LRRC59
CPOX
PTK2
YBX1
SLC38A2
CKS2
APEH
PTS
MIB1
TKT
ENGASE
GPRC5C
TMEM100
H3-3B
REXO1
LOC100289561
EIF4A3
KDF1
PSTK
GNAL
PIBF1
DIS3
EIF5A
INPP5F
CUL1
TPD52
IDH2
CST3
SARDH
TMEM202
PCDHB14
KLHL41
WASF1
CDC40
WDR4
ITGA6
PER2
PTDSS1
MTERF3
ANKRD18B
MIDEAS
MAP3K14
FAM220A
TLL2
USP10
PKP4
CCDC148
NIPAL2
CSMD3
MAFF
PCDHB2
DPY19L2
PRAMEF33
PCDHB3
STX18
ACOX3
TRMT44
MKRN2OS
MKRN2
RAB18
SOD2
WTAP
CITED2
CPT2
HDDC2
ARHGAP31
POLR2D
CNP
GCLM
SIRT5
SPTBN1
SERP1
EIF2A
ARSG
MFSD14C
EPB41
PROSER1
NHLRC3
TRIM25
CEBPG
TIFA
YPEL2
C10orf95
TRIP12
FBXO36
C5orf63
ERN1
TRIM39-RPP21
TRIM39
NTAQ1
GTDC1
DSE
SLURP1
SORBS2
TSPYL4
GBP2
C1QTNF12
ADAMTS6
ZNF679
TCL1A
SLCO6A1
PCDHB13
PCDHB12
LAMA2
GHITM
STK40
KDM3A
MLEC
TMEM229B
BORCS5
RABEP1
CDK17
OCIAD2
SLC25A4
BCAP29
KRTAP4-12
STEAP3
DSG2
PLEKHH1
SLC12A5
LRP5
TM4SF1
KRTAP10-6
TMEM70
ELOC
KANSL1
ATP6V0B
FKBP1A
CHD1L
RPL11
B4GALT2
NOTCH2NLB
RPS6
RMDN2
VEZF1
TAPT1
ZNRF2
DBP
C9orf85
ABHD17B
APOLD1
MIF
SPTLC2
STRIP2
PRKAA1
ATP2A2
REST
HTATIP2
SPX
PCDHA6
PCDHA5
AMD1
API5
PLEKHA8
XPO6
AMMECR1L
GRK5
TAB2
BLCAP
PDCD5
KAZALD1
MBTPS1
PARD6B
ZBTB7C
ARHGAP29
SEPTIN4
HEXIM2
MUS81
CFL1
MAP3K7CL
CCT8
ERI1
VOPP1
CUL7
PRDM2
SPEF2
GEMIN4
TOMM34
SUPT20H
UNC79
BTBD7
CLDN4
KRTAP10-5
ANO2
PARK7
STX10
IER2
HSBP1
MCL1
POLR2K
FBXO43
SCAF4
TXN
MAP3K5
NUDT18
PDCD4
SRCIN1
ALOX5
PTPRD
SPHKAP
NKIRAS1
TRMT1L
SWT1
WASHC4
ADAR
ATXN7L2
SMC3
C5orf34
C1orf53
HESX1
APPL1
TRIM47
ITGA7
BLOC1S1
CFLAR
ODC1
NR1D2
SREBF1
ZNF441
FUCA2
ROCK1
MAGI3
LGALSL
PATJ
FOXD4L3
EIF2D
MCMBP
COG1
TBCD
NT5C2
SLC16A6
LRRCC1
ZFAND5
KLHL9
PFN1
ENO3
NDEL1
RTKN2
CMTM7
MICALL2
HOXB9
PTPRN
LRFN1
ZFHX3
MALL
RAB1A
SLMAP
DNM1L
CDK8
KBTBD8
PEX3
ADAT2
DNAJC25-GNG10
DNAJC25
ELMO2
SAAL1
CCDC57
NPM1
SLC39A8
AP3M2
PKD1
GAPDH
NPY4R
ANKRD36C
TMEM65
TMEM251
MOAP1
CD38
CEP68
TYMSOS
TYMS
XKR6
EHD4
AMOTL2
CDYL2
SERPINB9
MUC12
SPHK2
RPL18
FAM83E
AGK
UBE2D3
HNRNPL
PITX3
GBF1
P4HB
TXNDC12
BTF3L4
RASAL2
SLC25A36
NUDT4B
FBXL5
CLK1
TPGS2
BRD3OS
NUDT4
MKI67
ITSN2
SDCBP
PM20D2
MAP2
CASD1
DOCK5
MRAS
ADNP2
SH3D19
MOXD1
ZNF80
PPRC1
RPL6
RPL35
ARPC5L
NOTCH2
DDX42
CCDC47
TRIP13
BRD9
SMIM19
SLC20A2
H3C10
PTPN11
H2BC13
H2AC13
KCTD18
UQCRFS1
SPIDR
INTS6
PTPN4
NDUFA6
PTP4A1
XPR1
ARSB
GGCT
IMPA2
TMED3
ACTR5
ARNTL
HLA-B
PDE8B
RUBCN
RPL13
NBN
ELAC1
TGFBR2
ANKRD46
AEN
NCOA6
GALNT7
ADI1
FBXL13
ARMC10
EFR3A
SFXN1
PARD3B
CLSTN1
HSPG2
TPD52L1
KRTAP9-2
FSTL1
AKIRIN2
RCAN1
RAD54L2
CD55
UBE2L3
IQSEC3
ANKRD36B
PTPN12
GSTO1
SCOC
RAN
PANK1
HELZ
STRN3
AP4S1
CAV2
SCN8A
TBC1D3L
TBC1D3I
TBC1D3H
TBC1D3D
TBC1D3C
RDH16
BOD1
WAPL
IPO8
SRFBP1
SNX19
SRRT
CCZ1B
TOMM40
PELI1
ANXA4
AAK1
TXNDC15
PGAP2
NCOA2
NFYC
DENND4B
EHBP1
KLF6
DBNDD1
RPE
BTF3
SLC38A10
KPNA2
PARP8
INPP4A
PTPRE
BAG3
ARHGAP32
GNPNAT1
PCTP
TLK2
JAK1
OAT
PSEN2
HEG1
GMNC
HOXB3
PLAAT1
GEM
NANOS1
GAS8
HOXB4
ACADS
PSD3
SLC25A52
RBM20
CTAGE6
BANP
RPS19
PRPF19
RMND1
ARMT1
ATAD3B
RFC4
PIGO
FBXW4
SZT2
MED8
DEK
ASAP1
RFX3
CMTR2
LOC100421372
HSPA14
CDNF
RAE1
SH3BGR
LCA5L
DHX15
SMARCC1
SYNCRIP
CD44
EIF4EBP2
TTC9C
HNRNPUL2
GRB2
MFSD8
ABHD18
DDX17
FAT1
ADRB1
TAS1R2
FBXO31
MAP1LC3B
PRRC2B
ZNF354B
AARS2
C2
DCUN1D4
SETD4
TEX38
ATPAF1
OARD1
NFYA
DHRS13
ATG16L2
RALY
AZIN1
SETD3
CCNK
TMEM74
TDRD7
GLRX2
PHF3
DHRS4L2
STIM2
POMK
MET
SMAD3
ANXA11
SLK
PRSS12
SORL1
COLEC11
AXL
ICA1
KRT1
SEMA4G
PCDHB15
C1GALT1C1L
GORASP2
PIK3CA
MYCBP2
PAFAH1B2
RNF32
SMAP2
OTUD5
LINC02210-CRHR1
GTF3A
PAG1
REEP3
NEDD4
SPATA20
TANC2
CBX2
SEC24D
ZNF532
PCDHB6
CASR
DUX4
LEMD2
TMEM109
KMT2E
C6orf62
ZNF623
ADNP
HNRNPD
DDT
EIF1
IGSF9
NMT2