ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2375366 | MV-4-11
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◣ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

NLRP12
WDFY3
GATA4
SPATC1
FRG2C
LAMP1
NFKB2
SEMA4B
MEF2C
PLSCR1
OR10J1
XRCC5
ABT1
GNG2
KLF2
GSTA4
MTRNR2L1
CMPK2
CALCOCO1
TLR4
IL1B
FEM1A
SPDYE13
PPIAL4C
CALR3
C19orf44
SLC18A2
PGK1
ITGB2
A2M
RPS19
IL7R
SMPD3
STEAP4
GPBAR1
PTK2
NUDCD1
CXCL1
PDLIM2
UBXN8
BOD1
SLC12A6
NOP10
NUTM1
CCL26
NIBAN3
H4C11
RNF149
APOL6
ZNF221
IFRD2
DNAJC5B
DMWD
FRG2
NEDD9
SUN1
H4C12
CD1A
DOCK8
CBX1
SNX11
GLRX
CD1C
PEX12
COL8A2
CLEC4G
DCAF12
GBA
TMEM104
NAT9
NR3C1
H4C3
H1-6
TMEM91
B9D2
CES1
PPIAL4H
DDX58
TMTC3
CEP290
NBN
ASGR2
SCNM1
LYSMD1
GHRL
KBTBD6
H2BU1
H2AW
CTU1
EXT1
PPP1R12C
BCL3
DUX4
INTS9
HMBOX1
MTMR9
RPS20
CLPB
ZNF780A
CYTH4
MS4A3
ZFYVE1
TMEM115
ZNF444
HIKESHI
SH3BP2
BID
MINDY3
MRPL24
FBXW4
EXD1
CHP1
DYNC2H1
TASL
TSNAXIP1
RANBP10
VCPIP1
C8orf44-SGK3
ZSCAN30
NDUFS7
NUF2
SIGLEC6
SIGLEC9
MICOS13
HSD11B1L
PANK4
HES5
CD33
GPAA1
EXOSC4
CEBPD
RAB4B
MIA
SPRED2
VWA3B
NABP1
EDDM13
LTB4R
LTB4R2
CIDEB
PEX3
ADAT2
RUBCNL
HPSE2
ST3GAL2
NBEAL2
KBTBD7
H4C15
H4C14
PAFAH2
RFX1
SUCNR1
PROS1
ZNF225
SLC23A2
MMACHC
CCDC163
PNKD
AAMP
CCR5
H4C9
MITD1
BRF2
SLC1A5
TPRKB
BTRC
JAML
IPCEF1
TRPV4
MEFV
PLEKHM3
RAB24
PRELID1
DHRS7B
MTF2
CHMP4B
PPRC1
TP53I11
H3C13
H2BC18
MRPS18C
HELQ
TMEM243
DENND3
GSPT1
DDX18
BAZ1A
TYROBP
RMND1
ARMT1
FOLR2
CCDC152
TRIP4
RAB39A
PPIAL4F
PPIAL4E
PPIAL4D
INVS
ERP44
ALOX5AP
TOR1AIP2
TOR1AIP1
GNA11
AP1B1
AP2S1
CCAR2
C8orf58
FIGNL2
ARHGAP25
PHB
KRR1
TM6SF1
MED23
ZNF226
ADGRG5
P2RY14
DISC1
UCKL1
NDFIP2
PEMT
CARD8
EHD1
FRG1
KANSL3
FER1L5
RMDN2
RAC2
NCF2
IL1RN
COPS7A
PPP1R18
BANK1
ZNF227
TMEM107
CTTN
LRRC37A
CSF1R
MTRNR2L6
YES1
CCDC146
GRPEL2
LMO2
ENOSF1
PPP2R2B
ARID5A
NME7
BLZF1
TBL2
TAF1B
INPP5D
CAMKK1
CCER2
ZSCAN22
POMP
EIF4G3
ANKRD63
ZCCHC4
STAP1
CD82
DNAJC10
CLEC10A
ICAM1
ITGA4
ATP1B2
PRCC
FCGRT
IGF1
INSC
FLOT1
IER3
SIGLEC1
ADGRE1
DCP1A
LRRC37A3
FAM227B
DTWD1
TAL1
JOSD2
ASPDH
MMP9
SORBS3
UTP3
WASHC4
GPR68
SMC6
GEN1
PARP10
GRINA
PGBD4
EMC7
AURKAIP1
HMOX1
GATB
INTS12
GSTCD
NOTCH1
PRRG2
NOSIP
RYK
MTIF2
PRKCE
VAV1
GALK2
COPS2
AHCYL2
RPS7
ANKRD18B
IPPK
RIPK1
VPS26A
TBC1D19
S100A8
FGGY
CA13
FRA10AC1
TMEM154
TTC33
TEFM
RASSF5
ARPC3
OLFML2B
GABPB2
PHC2
RUNX1
UBR1
ASPHD2
FBXO46
MEIOSIN
USP3
CTSG
PRR5
LILRA2
OBI1
RFFL
CAPG
SHISA5
TRNP1
RAB27B
ERLIN2
SSBP2
PPP6R1
MARCO
PPP1R12B
SYMPK
FOXA3
TBPL1
TEAD3
DPY19L4
SSBP1
SF3A3
LYSMD2
RPL6
TMEM68
TGS1
CCDC149
VPS13B
NFE2
DR1
RPL5
DDX1
PIK3CG
BSG
ZAR1L
BRCA2
TNNI2
PHF12
TSSC4
FASTKD1
KCNK6
LCE3A
MPEG1
NCALD
RBBP5
DHRS4L2
ACTRT3
SLC39A1
CRTC2
WDR74
PEAK3
MAP1S
SLC35B4
ZNF268
BORCS7
ZC3HAV1
DHX8
SLC25A10
XCR1
SLC35F5
H3C3
H2BC3
ADGB
VOPP1
H1-3
RPS6KA1
SCRIB
NDUFB7
JAK3
MRPL42
BCL2L13
RNPEP
SPATA24
CEACAM21
IRF9
SYNE3
FAM228B
SF3B6
GTF2H2C_2
GTF2H2C
BNC2
BCAN
CSF2RB
CARD19
TRIM31
PPP1R11
RPIA
ANXA2R
FAM133B
LCMT2
ADAL
ZFP64
ZNF554
TRIM35
PTK2B
SECISBP2L
FASLG
NSMAF
RPGRIP1L
FTO
ARHGEF18
HSH2D
TACC1
ALG10
RPH3AL
TTC14
GTF2H3
EIF2B1
FAM167A
SLC24A1
INTS14
ZNF350
PCBP2
DPY19L3
NDFIP1
RALB
SEC14L1
ZNF56
ZBTB45
PPIP5K2
GIN1
TCTEX1D1
NDUFS2
ADAMTS4
ZNF224
MRPL48
NINJ2
PDE4B
CCR1
DSTYK
MRPL1
ZC3HC1
EPN1
PLCXD2
OR1D5
USF1
CCDC88A
PARP2
CDK5RAP2
ZNF595
TMEM242
CCDC90B
NPY4R
NPY4R2
JRK
CHCHD5
INO80D
FCAMR
HCK
FUT10
PPP1R15A
PLEKHA4
PSMA8
LSG1
SDSL
PPM1M
TMEM212
TMEM229B
TACO1
ACTA2
PCM1
TTI2
TULP2
NUCB1
ZNF235
SCAMP2
SELPLG
COMMD2
H4C4
H2BC6
SNX17
EIF2B4
HUS1
ADAR
SIRT2
NFKBIB
PSMF1
MRPS23
AP3S2
CCDC9
PEX2
PIGV
ASF1B
EMILIN1
APPL2
TSC1
GFI1B
SMG6
CAPN2
CAVIN2
GFUS
ZNF286A
ANKRD40
ARHGEF3
ZNF518A
SLC1A4
STX7
TFPT
PRPF31
SLC39A13
H2BC5
H1-4
RIC8B
ZNF140
LMBR1
MIER2
CD93
CHMP7
PPP5D1
CALM3
GNB4
STING1
TIFAB
LARS1
TEX46
KDM1A
SAMD4B
GMFG
TMEM222
KDM6B
ACRBP
TCEA2
POLR2J3
MFSD10
VSIR
OLFML3
UBR2
HMGB1
USPL1
RBCK1
ZNF846
BCL2A1
IDH3B
PDE4A
RPL37
PRKD2
KLHL20
CPEB3
MARCHF5
GAS6
AQR
MPRIP
RAB3IL1
SLC37A2
NME1-NME2
NME1
SIRT4
OAZ3
MRPL9
SPOP
MORF4L2
MAML2
STON2
UBE4A
HERC6
RGS12
PLEKHG3
LRRC25
NFX1
LRRC8D
GTF2H2
ZNF148
BRWD1
SUPT7L
SLC4A1AP
RASSF2
EIF2D
LGALS12
INTS10
ZBED4
MPG
RHBDF1
TNFAIP1
IFT20
SCAF1
RRAS
SAR1B
MCUB
ORC2
PRKCD
NAIP
GOSR1
INKA2
DDX20
INO80C
PRIM2
ZC3H6
SIRT6
ANKRD24
UXS1
ACTR3
MKRN3
PSMD9
HPD
POLE4
TRIP12
FBXO36
MRPS31
CTNNB1
FOXP1
ARHGDIB
RNASE1
SCAMP4
ADAT3
N4BP2L2
TMEM41A
TRDMT1
HIBCH
KDM3A
POLDIP3
PES1
USP15
SEC22B
TCN2
SERPINE1
PPP3CC
H4C8
MED4
MARCHF6
TEX44
ESCO2
RRS1
ADHFE1
PLEK
ANKRD22
DDX23
TATDN1
NDUFB9
SHKBP1
MALT1
SLC22A18
CCNL1
PSMC1
ITPRIP
C1orf159
CCND3
SLC45A4
VPS50
HEPACAM2
ING4
ALG10B
H1-2
H4C7
H3C7
H2BC9
GFOD2
SLC44A1
ISG20
SLC22A16
TIGD6
HMGXB3
EMC4
TRIM69
DCAF10
ARID3B
NUFIP2
CWC25
RXFP1
AGTRAP
THAP1
MRPL27
EME1
FBXW11
ZNF420
ZMPSTE24
TMBIM4
COX7A2
BNIP1
MYO1A
MICAL2
TUBA8
COX7C
PTPN6
C12orf57
ZNF212
PSMA1
DRAP1
C11orf68
EFHB
FNTA
ASH2L
MYBPH
APOL4
BOLA1
TVP23B
ARL8B
POLR2M
RNF166
FCRL4
TFEC
RPL27
H4C1
RXFP4
H3C1
H1-1
CALHM6
BAZ2B
ARMH3
SETDB1
DRG2
SLC35E2A
BMS1
RPS15
ROPN1L
TPR
ODR4
SQOR
MCTP1
COPS4
GNAI2
H4C5
TBRG1
H2BC7
H3C4
H2AC7
PRAM1
GTF2H4
CCNC
PRPF18
TXNDC15
AOAH
DUSP7
CAMP
EMP3
TATDN3
NSL1
CCDC59
CCDC114
EXOC3L1
E2F4
OPA1
CCDC124
TSSK6
NDUFA13
MYL12B
NUDT13
WASHC5
NSMCE2
MORC1
TFEB
METTL3
NOTCH2NLC
TRIB1
ZNF331
ZNF76
TSG101
CNPY3
SPIDR
PPIL2
CYP4V2
DENND4B
DSCC1
NUDT4B
SAMD14
CDK5RAP1
USE1
VTA1
NMBR
CBLL1
MOB4
ALDOA
TAGAP
SIGLEC16
C1QA
RNASE10
PCNP
RBM45
PDE11A
LSM8
SIGLEC7
UTP23
TESPA1
RASA1
ETV6
PTGS2
ORMDL3
BRIX1
C18orf21
S100B
SHISA7
GSK3A
H4C2
H3C2
H2AC4
MICU2
XAF1
RPL29
PRKCI
MRPL34
DDA1
ABHD8
HDDC2
MLNR
MRPS15
LYNX1-SLURP2
LYNX1
H4C6
BANP
PUM2
FCER2
TEX36
DOHH
ZNF180
LUC7L2
ATP13A2
FMC1-LUC7L2
FMC1
MBNL1
ZKSCAN4
UBLCP1
C10orf95
PEX26
VIRMA
ZNF557
RAB11FIP1
WNT2B
CBFA2T3
NFKBIA
NUDT7
KCNK9
TTC13
SASS6
ZCWPW2
AZI2
N6AMT1
PSMC6
OR52W1
C11orf42
RAB3GAP1
FBXO39
MRPS10
RPL23
STX1A
UNC45A
HDDC3
METTL6
EAF1
TLR1
KMT2B
MARS1
ARHGAP9
MRPL44
MRPL16
TCF3
NOTCH2
SUGT1
TRIM71
ZNF749
ARHGEF1
HARS2
HARS1
SIGLECL1
PDCD6IP
ZNF574
SERPINB13
MAGOHB
IL12B
C19orf53
TOP3B
H3C8
H2BC10
COMMD4
MAPK1IP1L
PPIAL4A
SLC35F6
FBP1
TIMM21
FBXO15
RUFY3
CDIPT
COX18
PTAFR
NDUFS3
KBTBD4
LTN1
NUP54
SDHAF2
CPSF7
MX1
SLC7A11
SH3TC1
MRPL3
TEKT2
ADPRS
UBE2F
RABGGTA
VRK2
TRIM8
PTPN12
POLR3B
EIF2B3
MAP2K1
NEK4
TMEM121B
AVIL
PSENEN
LIN37
CNTRL
P2RY6
POLE3
C9orf43
DNAJB12
RPL31
THEM4
HEATR5A
EMB
F2RL3
TMCO1
BECN1
ERCC1
CLN3
APOBR
NCF4
PPIAL4G
SULT1B1
C1orf162
DGKZ
FAM160A1
KRT36
TMEM70
ELOC
PDSS1
BACE1
DGAT1
NSFL1C
SLC25A23
CRB3
POLI
TNFRSF10A
C8orf37
NKAPL
WDR70
KMT2E
UNK
H3-3B
YIPF2
TIMM29
VPS25
TMEM65
PSMB8
HENMT1
WDR24
SLC25A32
DCAF13
TBC1D13
CELF2
ANKRD13D
ZNF410
IKZF1
MDM4
MED18
TTC26
RAD23A
CCDC107
R3HCC1
ODF3L2
NDUFAF1
H2BC21
H2AC21
H2AC20
CCNI
SFSWAP
POGLUT3
CCM2
SGF29
SMARCA2
SMIM33
UHRF1
SPNS3
ARRDC5
RAPGEF1
RFX8