ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637469 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◣ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

CALCOCO1
TMEM115
IFRD2
TCEA2
FEM1A
CALR3
C19orf44
TSNAXIP1
RANBP10
FRG2C
SMPD3
MRPL24
BTRC
RHEX
MMACHC
CCDC163
PHB
NUDCD1
UCKL1
CLPB
PRCC
AP2S1
KBTBD6
ATP2C1
C1orf159
ST3GAL2
KBTBD7
PPIAL4C
PNKD
AAMP
HIKESHI
NFE2
PI16
GTF2H4
PKIG
MICOS13
HSD11B1L
HHIP
GSPT1
SCNM1
LYSMD1
PAFAH2
ING3
AGBL1
EMILIN1
CHMP4B
PHF12
PLCL2
AHCYL2
CCDC146
TOX2
SLC4A2
CDK5
WDPCP
MDH1
ZFYVE1
BOD1
PCDH10
NPRL2
CYB561D2
ZMYND10
CYTH1
PPP1R16B
BANP
INTS9
HMBOX1
PEMT
MAD2L1BP
GTPBP2
FARSA
CALR
NKAIN4
C3orf86
UBR2
PPRC1
PPP1R12C
LZTFL1
SCAF1
RRAS
CST5
LTB
LST1
SLC39A1
CRTC2
CCM2
CHCHD2
RUBCNL
PPIAL4G
ZNF331
GLG1
STK17B
GNA15
STAU2
PARL
ALDH1A2
ZNF225
SRPK2
GRAP2
STATH
CD300A
PPAN-P2RY11
PPAN
ANGPTL6
IQGAP2
NFRKB
ARHGEF7
NTAN1
UNK
H3-3B
UBQLN4
LAMTOR2
ZNF444
KCTD9
CDCA2
BAIAP2
SUFU
ACTR1A
CR2
CD1A
APBA2
H2AZ2
CXCR4
ZNF140
ITGA4
VCPIP1
C8orf44-SGK3
RBL1
CTU1
TSSC4
DGKA
PYM1
TMTC3
CEP290
DSTYK
PHF13
HECTD1
TESPA1
GATB
VIPAS39
AHSA1
PTPN6
C12orf57
SLC35B4
OR4D1
FXYD2
PANK4
HES5
CD1B
ARL17B
ARL17A
KMT2B
MSL2
ACADM
ZNF337
INVS
ERP44
PRKD2
NPIPB15
SLC2A6
LSM4
GSR
GFRA4
EPHX2
WDR74
SHQ1
TLR9
FMNL1
SYMPK
FOXA3
VPS50
HEPACAM2
FRG2
DCLK3
ZSCAN22
PSMF1
ADA
NBEAL2
OR10T2
TIMM21
FBXO15
BIRC5
FAM193A
DUS3L
LARS1
FBXO48
APLF
DDX23
RIC8B
PVRIG
MDM4
FBXO46
MEIOSIN
LAT
RANGAP1
SEC14L2
ARHGAP24
ZNF784
BHLHE23
DCAKD
NMT1
FBXL19
PPP1R12B
MAP1LC3B2
GFUS
RABAC1
KRTAP16-1
ZFYVE19
DNAJC17
RPS7
CD69
LDLRAD4
RGL4
HDAC7
PYGM
WNK1
C16orf91
RAB37
KANSL1
CCDC90B
UTP3
TGM6
TAS2R50
N4BP2L2
JOSD2
ASPDH
GPKOW
MED23
ZNF500
NAPA
TMEM107
TNFRSF13B
H6PD
THYN1
ACAD8
BNIP3L
APBB1
EMP3
CCDC114
SOX17
FBXW11
MX2
TMEM70
ELOC
TNFAIP1
IFT20
NUF2
ABCF2
CHPF2
RCSD1
MND1
SOX6
C11orf58
LAIR1
PRPF40B
TRAF4
ITGA6
FMO1
TNFRSF4
TFEB
FGR
GSK3A
ASB2
AFF3
SLC12A6
FNTB
ABHD12B
TRIB1
BUB1B
LEF1
RETNLB
SCRIB
SYTL2
THEMIS
HRH2
FAM3B
STK25
PEX14
DFFA
PPIAL4F
PPIAL4E
PPIAL4D
SNX17
EIF2B4
RPIA
CHCHD3
COX7C
SMARCAL1
RFX8
TSC1
GFI1B
SSBP1
ORMDL3
AP2M1
CAPN15
POLDIP3
CDK8
SIRT2
NFKBIB
SCGB1C1
ODF3
IL17RA
SIRT4
ZNF165
NSFL1C
PRRG2
NOSIP
SLC47A1
HSPA13
DRC7
MRPS18C
HELQ
ZNF354C
PEX3
ADAT2
ARHGEF3
UBE2J1
BORCS7
FOXN1
DESI2
DEGS1
TRAF3IP3
LMO2
H4C12
SLC33A1
TES
MYO1G
FAM222A
STAU1
TMEM245
PTCRA
ERGIC1
RTTN
SPATA46
ZNF605
ICAM2
AURKAIP1
ARHGAP4
ZNF335
CANT1
COPS4
MZB1
CLEC16A
DEXI
ZNF354A
PTK2
ERAP1
RPGRIP1L
FTO
MED15
DDX4
ZNF230
CDT1
NME1-NME2
NME1
SERHL2
CCP110
SLA
GP5
FASTKD1
MFAP4
SMO
RCAN1
ALG10B
CDK5RAP3
TLE3
ACSF3
TMEM59
TTI2
SMCO1
EVL
GZMA
NCOR2
CDK5RAP1
KRR1
ATXN7
LGMN
MRPL1
IPO4
UBE3C
PEX26
ATP6V0A1
CBFA2T3
TNFRSF1A
SYT12
HEMGN
CFAP20
ADORA2A
RUFY3
COL6A2
EIF3F
INTS12
GSTCD
WDR87
SIPA1L3
TFPT
PRPF31
ATP11B
PPIAL4A
FHAD1
CXorf49B
CXorf49
BCL3
NSMF
PLCG1
SMAD7
EPHA1
PHF19
NEIL3
MTF2
SF3A3
CCND3
TAF8
TPGS1
TBC1D21
DYNC1I2
PHF23
GABARAP
DVL2
BCL9
TTC13
EVPL
TTC33
ZNF749
PALLD
GPANK1
CSNK2B
LY6G5B
C6orf47
COX16
MKRN3
STAP1
ZNF133
REPIN1
AQP3
FCGR2A
FAM185A
ASXL1
FIGNL2
CCDC150
THBS4
ETV3
TBC1D10C
RPS20
WBP2
MMP9
FAM228B
SF3B6
SPC25
TRAPPC3
RAB1A
TTBK1
RPP40
RBM38
TRIP4
ATAD2
TMC6
TMC8
TJP1
NET1
ZNF56
ASPRV1
NDUFS7
IRX2
C5orf38
D2HGDH
ALG10
CCL1
PLAAT5
SLC25A19
ZNF408
ARHGAP1
TMEM101
BLK
CCAR2
C8orf58
ZFYVE21
XRCC3
PTDSS2
ARHGEF18
RLN1
CD3E
AKIRIN2
RASAL3
PSMD11
TBC1D31
FOXP1
DUSP2
CISD3
OSBPL5
TMEM45B
VOPP1
RIPK4
SNAPC3
DHRS11
ZBTB45
BRF2
ZNF350
TRIM47
CTDP1
CHMP7
FCRLB
MARS1
ARHGAP9
TLR6
ZNF224
POMT1
SNRPD3
GUCD1
EPSTI1
CSTA
MAMSTR
NFKBIZ
NR1H2
C19orf53
NUDT13
CIC
CCNG2
BICD2
ZNF227
TMEM127
CIAO1
NOP16
HIGD2A
LCK
ARID3B
RORC
MAP3K8
GUK1
RPL18A
PPIP5K2
GIN1
YIPF2
TIMM29
ADAD2
VAT1
SLFN12
CLP1
TTF1
ZNF226
CD82
ZNF354B
DBNDD1
CYB561
NOP14
GRK4
PA2G4
ZMAT5
UQCR10
CHST12
ASAP1
MTMR9
NUCB2
TLE4
SH2D3C
DCP1A
ZNF595
MYLK4
CNOT4
CACNA2D4
LTA4H
DPP6
ACOT7
BUB3
JRK
IDNK
USP48
ZNF169
RALGAPA2
MSH5
CLIC1
DUX4
ZFYVE28
CFAP99
REXO4
ADAMTS13
TSC22D4
NYAP1
BPI
SNX1
CIAO2A
ENOX2
MBNL1
TMEM229B
AFF1
GNG12
SMUG1
RPL29
FKBP5
RPS26
PPIAL4H
TNPO3
RPL23A
RAB34
THAP11
NUTF2
CENPT
STX18
PNLIPRP3
ATP13A1
ZNF548
ZNF101
HIF1AN
MRPS31
ZCCHC8
MEN1
LRFN3
ESCO2
CXXC5
TCF7
SLC17A7
WDR24
NDUFS3
KBTBD4
H4C15
H4C14
ASNS
KCNA2
MKNK1
DFFB
CEP104
ZNF652
TMEM163
SUGP1
MAU2
NUP107
MAX
TOR1AIP2
TOR1AIP1
IFIT3
PEX5L
PTPN3
ZNF527
RPL27
RPS13
DLC1
FAM168A
AGK
HIPK1
ADGRE2
ZP1
ZSWIM9
LIG1
LSG1
S100A6
S100A4
S100A5
PPP1R18
ZAP70
RBM6
GALK2
COPS2
SCML4
ARHGEF1
STK4
RNF166
CDK5RAP2
VPS41
TSC2
NTHL1
NANOS3
IL23R
OSCAR
NDUFA3
ZNF343
DNM1L
ATP5MF-PTCD1
ATP5MF
NSA2
GFM2
GGA2
DOK2
C17orf75
ZNF821
PDE6D
COPS7B
ZNF37A
H4C3
H1-6
FAM163B
FNDC11
TMEM41A
MITD1
DEK
CYP2U1
SEPTIN9
CLDND1
ZNF420
TFAP2E
TRAF7
ETFDH
C4orf46
DAAM1
KCTD5
RTN4
SMIM33
MICAL1
MLEC
UBAC1
AGPAT3
LIG4
ATP2A3
TMEM258
FEN1
ACTR3C
PCNP
PRKCI
ZNF329
TMEM208
LRRC29
MYL6B
NIBAN3
SWI5
GOLGA2
LMNB2
AQR
ZNF688
MTRNR2L1
ITGAL
SBF1
TMEM102
FGF11
STMN3
RTEL1
ALKBH3
RBBP5
DPY19L4
SNRPB
ZW10
ITGB3BP
EFCAB7
FDPS
MRPL44
SDE2
NOTCH2NLC
XPC
LSM3
RALBP1
LYST
NMT2
C16orf54
USP30
ZC3HC1
GTPBP3
ANO8
GPR160
ZGPAT
ARFRP1
MGRN1
ADD3
IFNB1
CLTC
LRRC1
DTHD1
ING4
NR4A2
PANK3
AOAH
KIAA0408
CPE
CBARP
ATP5F1D
SLC39A3
IFNA1
XPNPEP2
TOX
ZBTB7B
RAB30
AAR2
SUPT7L
SLC4A1AP
DLX5
STING1
SCGB1C2
GPR157
ATP6V0E2
ARHGAP45
CD2AP
YPEL3
TBX6
RNF125
PIGU
NCLN
LMNA
ADAMTS1
PSD4
TMPRSS13
CHRNA3
FAM207A
KBTBD8
VKORC1
CCDC15
CCNI
PNPLA6
ARHGAP19
ADGRG1
S100Z
TOMM40
GABPB2
SLC26A11
SGSH
VPREB1
CNIH4
NDUFB3
FAM126B
ODF3L2
LRIG1
CD59
HEXIM2
ENTPD4
LETM1
IL21R
SLC7A8
CAPG
DRG2
PIH1D2
NKAPD1
RAB5C
NRDE2
MFSD3
GPT
MYO18A
ZNF189
MRPL50
NUMA1
LRTOMT
ZNF570
ZNF569
TMEM199
POLDIP2
RBM28
TAB2
C12orf43
WIPF1
SH3BP5
NOTCH3
RUVBL1
TRRAP
VWA3B
TUT1
CST7
TULP2
NUCB1
BMS1
CNN2
GRHL3
NUP54
SMIM41
LTN1
FBLN2
TMEM160
PSENEN
LIN37
GTF3C2
ZNF26
DHX33
KIF15
KIAA1143
LPAR6
PLEKHF1
GPR137
PUM3
RAB27B
SOAT2
CASP8
EMSY
ADGRE1
PPP2R5B
SIT1
ARHGEF2
KLHL20
DGKZ
LIMS1
STX1A
DHX8
PPP5D1
CALM3
ZSCAN5A
SLA2
MRPS23
CDCA8
C1orf109
DCAF10
NCR2
DMBT1
ZNF277
DOCK4
HSCB
CHEK2
MTBP
MRPL13
SVIP
NOP53
ZCCHC4
IQGAP3
ATG9B
ABCB8
CCDC97
CD46
LOC388282
CLN3
APOBR
LAX1
ZNF805
CDH4
ATP5PO
MUS81
CFL1
SELENOH
SMG8
PTPN22
PTPRCAP
SERPINI1
PDCD10
STK16
GLB1L
LIMS4
LIMS3
TM7SF3
GCSAM
CTF1
BCL7C
THRAP3
SEC11C
UCK1
ANKRD40
UBE3B
CCDC88B
B3GNT3
DGAT1
ZNF45
MRPS16
ZNF451
GRK6
CXCR3
ASCL4
RACGAP1
TCF3
CD3G
CD3D
UBL7
DMAP1
VRK1
STAT1
ATL2
EML6
ORAI2
ABCG1
CUEDC1
C15orf62
NAGLU
TRAK2
STRADB
COMMD2
KCNAB2
LIME1
ZNF32
TRMT6
MCM8
SYTL3
PEAK1
HMG20A
SF3B5
EIF4A2
POLR3B
PHF20
ARHGDIB
VPS9D1
SAMD3
L3MBTL2
TM9SF4
STARD10
WRNIP1
TERF2
PPP1R13L
POLR1G
TTC4
LRP6
GAS7
DEFB4A
GSTA4
EMB
SUCLG2
DNMT3B
TNFSF4
RNF151
TBL3
C19orf67
MED11
TARBP2
MAP3K12
GTSE1
TMEM123
ZNF563
UTRN
CDC14B
TRAF3IP2
WBP1
INO80B
TMEM178A
ZNF235