ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2059876 | BJAB
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◣ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

SLC1A7
THEM4
SLC2A7
KCNJ15
YWHAQ
TATDN3
NSL1
GORASP2
APOBEC3B
HYDIN
SGCE
PEG10
CENPV
ACTL8
UBE2F
SAMD4B
AUH
MTRNR2L8
RBBP9
MTRNR2L2
MSH3
DHFR
FEM1C
ZNF117
EFCAB12
NSFL1C
YPEL3
TBX6
GPRC5C
CEP72
MEMO1
DEK
SPDYE1
TTC32
RABGAP1
MAP3K2
DBNDD2
IGFALS
CMTM3
NLRC4
RPS29
LSG1
APRT
ZFP30
FRG2C
KMT2A
SUPT7L
SLC4A1AP
ZNF324B
MGAT5B
TMEM130
PSMF1
ITGB3BP
EFCAB7
SEM1
SEC23B
SLC25A51
FGF1
CCDC88A
POLR2J3
NARS1
CCDC130
PGBD2
REM1
DEFB124
RCOR3
MAD1L1
PUM1
TIMM22
LUC7L2
FMC1-LUC7L2
FMC1
EXTL2
ZNF3
CYP2E1
RPS7
LCP2
ST20-MTHFS
MBOAT4
PARP15
SPACA3
PRSS38
DEGS2
FAM160B1
FBXO38
BCAR3
NME4
SLC18A2
CRIP3
GSPT1
KDM3A
TMEM43
CHCHD4
TATDN2
RPL27
BRWD1
HEXD
TOR1AIP2
TOR1AIP1
ARMH3
MTF2
GBA
MAN2A1
SRXN1
EIF4A2
NUF2
PCP4L1
GUK1
C2orf88
ZNF562
DEFB128
PAXBP1
ATAD2
LOC101928841
PRKAR1B
TBC1D22A
PRCP
DEFB116
RPS14
HUS1
LCN6
SLC24A1
INTS14
TLR2
FAM133B
SPDYE2B
SPDYE2
UPK3BL2
RTTN
ZNFX1
FRG2
LZTR1
WDR43
ABCB4
CYP51A1
MRPL40
HIRA
INTS12
GSTCD
HNRNPA1L2
CCDC149
VPS13B
MAML1
RERE
MTRNR2L1
SLC30A6
YME1L1
ARHGEF18
IAH1
MTBP
MRPL13
PET117
KAT14
KRBA1
PMFBP1
POLR2J2
SPAST
RNF141
ZNF441
MED4
R3HDM4
RASSF2
SAMD4A
NPAS4
METTL8
DCAF17
SPDYE17
PPIP5K2
GIN1
MRPL19
CBX1
GTF2H2C_2
GTF2H2
FAM184A
NDUFA4
BIN2
AURKAIP1
SNRPB2
EIF1AD
BANF1
SSBP1
FRA10AC1
MKNK1
SMIM13
MTIF2
NBN
CCDC59
SNAP47
JMJD4
TMEM65
ERVW-1
EPRS1
KDM1A
TEX46
RANBP1
TRMT2A
SLC33A1
ATR
MLEC
NUDCD3
GTF2H4
FAM98A
RCBTB2
SELENOH
SPHK2
RPL18
FAM83E
RB1
MRPL44
DCP1A
UFD1
CDC45
SRRT
TMEM239
C20orf141
COMMD2
SNAP29
PI4KA
CHD1L
PRKAB2
PTCD1
CPSF4
HM13
NCBP3
CTAG1B
CTAG1A
SF3B6
FAM228B
CRKL
ZNF275
COA6
ADAM22
SNRPB
WDR55
TMEM89
STX18
RPS15
SUGT1
CCDC150
PTPRCAP
UPK3BL1
RINT1
HMGB1
USPL1
TGDS
PPP1CC
HK1
POU2F2
BANP
SPDYE3
TSPAN10
NPLOC4
TBC1D19
NOTCH1
NUP54
DRAP1
C11orf68
LRRC37A3
IL21R
DOK4
NBPF1
DCT
TOX4
RAB2B
LRP6
HIBADH
TIPARP
DPY19L4
WDFY1
HSPE1-MOB4
HSPE1
HSPD1
GCNT7
FAM209A
PSMG1
PDIA6
OPA1
CFAP36
SUGCT
MPLKIP
R3HCC1L
UBB
BCL2L1
ZCCHC4
YIPF4
NDUFS7
REN
SPDYE12P
CLTC
SDHAF3
SPRYD7
NME1-NME2
NME1
KANSL3
FER1L5
ZMPSTE24
CLUL1
AP1G1
SLC9A3R1
CCDC97
GFI1B
TSC1
GAPVD1
DHX58
IBA57
SPDYE13
SPDYE9
SPDYE8
SPDYE15
SPDYE11
ANKEF1
NAPEPLD
TSC22D4
NYAP1
NEIL1
ATXN2
CA14
CA2
TMEM229B
FAM98B
CRNKL1
CFAP61
GNG2
NDUFB3
FAM126B
MCM7
AP4M1
TRIP4
ZNF408
ARHGAP1
SLC41A3
CCSER2
TBC1D13
RTN4R
HARS2
HARS1
PPP5D1
CALM3
DYNC1LI2
ZNF292
PEX5L
DCAF10
FGD3
COPS7B
PDE6D
RABGGTA
ZZEF1
CYB5D2
SLC29A2
PRPSAP1
MICU2
EMILIN1
RPL37
GCFC2
DCXR
PIH1D2
NKAPD1
TMEM191C
OR4K17
NUDT15
ZNF25
PCYT1A
TRIP12
FBXO36
NOTCH2NLC
TSG101
SCCPDH
SCGB1C1
MCUR1
PEX3
ADAT2
DDX1
RNF6
LDB3
NOTCH2NLA
IPO4
TBCD
HKDC1
TRMT61B
FZD1
ZNF891
ZNF10
CCDC116
FAM227B
DTWD1
RRP15
POLR3B
SEC22B
GSTP1
GALK2
RUVBL1
COPS2
EEFSEC
SYPL1
BCAP29
TTLL12
TTLL1
SLC7A11
EDC4
CCDC71L
ZCWPW2
AZI2
CBLL1
RABGAP1L
MRPL48
ARL11
DUX4
RBBP5
REXO4
ADAMTS13
MRPS18C
HELQ
DCTN4
BTN3A1
GTF2H2C
RPS6KA2
NCOA1
ZNF341
ZSCAN26
SLC25A13
CAPN14
GNB2
NSMCE4A
CCNG2
ALG10B
UBE2L3
UBE3B
BFSP1
DSTN
TRAF6
RAG1
FBXL13
ARMC10
ARHGAP45
RAD54L2
C8orf37
C2CD4C
FAM170B
UBL7
ACAA2
MS4A1
WWOX
CCNI
SRRM3
SEPTIN7
NCF2
MOB4
DHTKD1
LANCL2
FBXO11
UCHL5
RO60
KDM5C
BIRC6
XKR3
RGPD2
RGPD1
ING2
EMC8
COX4I1
ATXN7L2
MIA3
RHEX
IST1
DSTYK
TFPT
PRPF31
TVP23B
KDM3B
SIRPA
EIF3E
AP5S1
TSEN15
PCBP2
TNFAIP8L1
BCR
RBM33
MRPL58
CRLS1
H3-3A
CALM2
ZMIZ2
WBP1
INO80B
NAA35
ZNF572
CADM2
DRG2
VTA1
NMBR
UIMC1
MRPS23
ST6GALNAC6
ZER1
VRK2
DESI2
ZNF436
IFT22
TRUB2
COQ4
ZSCAN25
ZC3H6
PDE4A
TENT4B
REEP2
RPS26
NMNAT1
LZIC
RBL1
GOLGA3
VPS50
HEPACAM2
UBE2D2
TRA2A
MITD1
INO80C
LARS2
IFI44
UBOX5
FASTKD5
BLOC1S6
MNAT1
WDR36
ZCCHC8
WIPI2
INTS5
RNF139
TFR2
PRKRIP1
PCP2
STXBP2
GTPBP6
PUS10
PEX13
ETF1
TMEM230
PLCB2
OST4
UGCG
FAM118A
GARS1
SAYSD1
TWF2
PPM1M
OASL
C18orf21
NCKAP1L
TRAM2
SOCS5
LOC100289561
SYT7
SPINT2
DOCK2
RPS20
DNAJB12
AARS2
DUS1L
UNC50
COA5
PSEN2
TCTEX1D2
TMEM41A
SNIP1
DNALI1
NOP16
HIGD2A
CDK12
PTGS1
DHRS12
PHIP
MRPL42
NIP7
COG8
NUDT7
IRF5
N6AMT1
NEDD9
C11orf80
SELENOI
ADGRF3
TRRAP
MRPS26
GNRH2
KIZ
PDGFD
MRPL38
CLK4
BRF2
CAB39L
SLC35A1
ABHD12
SETDB2
STX16
SECISBP2L
ANGEL1
USP32
ZNF789
KCTD5
CD300LD
MRPL1
B4GALT7
ING3
BANK1
CNEP1R1
ZNF333
ZNRF4
GPR180
GABPB2
MRPL3
ITGA4
CCS
CCDC87
CDC25C
FAM53C
COMT
COMMD1
COPS8
ZNF337
SLC35F5
ACBD6
RABIF
TERF2
PBRM1
HS1BP3
GNL3
TENT5B
KPNA3
SFSWAP
PLK3
RBM28
ADSS2
ORC5
POLE4
SRP9
RRBP1
SLC26A11
SGSH
KRR1
NDUFAF1
FPR1
TMEM101
RIC1
SCAND1
PKM
MARCHF10
CYLD
ENG
NFAT5
RNASEH2C
DPP9
IDH3B
THAP7
PTPRA
RTN4
SLC39A13
TAF3
ABCB10
TNPO3
ANKRD36
SCP2
FER
USP15
PAK2
POLR1F
ARL14EP
ASNS
KATNBL1
POR
EIF2D
RAD52
SMIM26
C1GALT1
GABPB1
NT5C3A
TEFM
CUL2
ORM2
ORM1
CDCA7L
ZC3H13
LSM5
AVL9
WDR70
CFAP20
TUT1
EIF2B3
CCNL1
MGST3
TMEM168
PPP1R14C
DPY30
CEP120
PRMT5
FBXO22
FAM110A
HCFC2
GLT8D2
MMP26
COX7A2
ASPSCR1
SMAD5
VPS4A
RAB3IP
FAM76B
CEP57
MTX2
SPATC1L
PAFAH2
RMND1
ARMT1
HMOX1
SF3A3
DDX18
CYB561D1
LONP2
ABCC11
COA1
HAX1
UGGT1
MGARP
ZNF22
SMURF2
E2F2
THAP11
NUTF2
KIAA0895
ANLN
STRN
DNAJC27
WWC1
NAA20
ANTKMT
CCDC78
ZMYND15
CXCL16
ZNF770
FAM234A
VPS72
CAB39
KMT2E
SKIL
CLK3
PSMG3
AKAP10
RBCK1
SGK3
SERPINB9
ITGB4
SLTM
ZNF335
SCO1
ADPRM
TTC27
STAT3
TARS3
PURA
DTX2
NRROS
TTC4
RPS6
TLN1
CREB3
TEX261
SLX4IP
MKKS
CAPRIN2
TSC22D2
ALG10
METTL9
NOXA1
TIMM10
ATRN
CCDC57
ZSCAN31
CCM2
GPER1
MBTPS1
TMEM68
TGS1
COG2
RNF24
ISY1-RAB43
ISY1
CALM1
MCCC1
HPCAL1
ZNF557
MRPL39
WDR53
FBXO45
PIK3R5
KIAA0319
DOCK8
C7orf31
IL17RA
MPEG1
ANKRD40
NDUFA6
PCTP
POLR2J
SEC14L1
TMEM39B
DAG1
POLR1D
LNX2
DMAP1
CAMK1D
C1orf53
CTDP1
ID1
RELA
CATIP
TMEM222
METTL26
ZNF23
RSRC1
SHOX2
OR2L13
OR2AJ1
HERC4
SIRT1
DTNBP1
TIMM9
KIAA0586
FHAD1
LCOR
CFAP298-TCP10L
CFAP298
QRICH1
BCL2L13
INAFM2
CCZ1B
WDFY2
CIPC
TDP2
ACOT13
ADNP
DDX46
FOXJ3
TMEM106B
ERCC1
LNPK
C10orf88
RNF216
POLR2C
ARSG
SMG8
WDR5B
GGA1
PTOV1
RFC1
ZNF570
ZNF569
ZNF609
RBSN
FAM217B
WASHC2A
PPP1R3D
CCPG1
C15orf65
PSMD12
NR3C1
DDX5
PIGO
UBA5
ACAD11
CCNA2
PRPF18
ARHGAP19
TTC14
SNAPC3
WDHD1
SOCS4
INSIG2
ZNF595
CBX8
UFSP1
TTC21B
RSAD1
SDE2
STARD4
RASSF6
GTF2IRD2B
CSRNP3
CHMP1B
KAAG1
DCDC2
TFB2M
CNST
DNAJC30
BUD23
CELA3B
ZBTB45
DGKZ
CYBC1
RHOG
MLST8
TPX2
TXNRD2
NR1H3
ACP2
RALBP1
STK35
AADACL4
SCGB1C2
CLPTM1
GMPS
STX8
CFAP52
PGS1
LGALS1
LMF1
TSGA10
C2orf15
PRSS27
CDC73
HEATR1
DHRS13
TMEM167B
FLOT2
PPIL4
TLR4
ABLIM1
TRNAU1AP
EFCAB2
YAE1
WDR17
CRY2
MTMR6
APEH
LIMS1
UBXN1
LRRC58
NR1H2
CCDC77
WASL
MED14
KDM5A
DENND4B
TRIM47
LGALS9C
ABCA3
MRPL16
GFM1
EIF2B5
QSOX2
OCEL1
MTOR
COPS4
SRCAP
LOC730183
TAF1B
RAB4B
MIA
RASA4
ADRM1
ZSCAN12
AQR
NUDT3
ITGB1BP1
CPSF3
UBE2Z
CDC25B
TRMT6
MCM8
CENPB
ATP5MC3
RHOT2
IPO13
TJP3
CLTCL1
ARMC8
NAMPT
DUSP6
DHRS2
SCNM1
LYSMD1
PARL
MAP9
TRIB3
TASP1
TPR
ODR4
ELOVL1
PDCD6
HEATR5A
TACO1
PSEN1
THAP6
CREM
KRAS
PUM3
PLEKHG4
CALCB
NOS3
ANKRD36B
FNDC3A
LSM2
CLN6
HNRNPA0