ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2
FRG2C
PMF1-BGLAP
PMF1
COL23A1
MAMDC2
FANK1
LMLN2
TTLL12
KLHDC4
PHB
SUPT6H
SDF2
PMAIP1
CBX1
ZNF264
NARF
CYBC1
PAXBP1
EEF1A1
CANT1
MRPS7
GGA3
PDXDC1
POTEH
H3-3B
NDFIP1
FAM117A
SHOC2
BBIP1
FH
ATAD2
TCF7L2
NBPF1
CACUL1
MPZL1
ZMYM3
ZSCAN25
PHC2
MTRNR2L8
BAG3
TMEM71
PHF20L1
UBALD2
CYC1
CCDC137
RPL38
ZFP91
LPXN
STX12
AHI1
USP10
GRB2
THOC3
WASHC5
NSMCE2
LEMD3
ABRAXAS2
TRAP1
CCDC30
ZMYND12
PPCS
ACSL3
CTAGE8
CTAGE4
SLF2
KIAA1549
REPS1
PDCD6
SMC3
DDX17
ZNF12
TRMT1
NACC1
MCMBP
SMNDC1
C8orf76
UROS
BCCIP
EPN1
TNFAIP8
FBRS
ABCD3
EXOC6
NME2
LOC100289561
VKORC1L1
MTRNR2L2
MSH3
DHFR
EIF3F
SMAP2
WDR43
KLF5
SURF4
C10orf88
CSNK2A2
ATG16L1
CHORDC1
EXOSC2
ATL2
UBR5
ZKSCAN1
PCOTH
MIPEP
IMMP2L
ZNF652
PLEKHA1
SEC61G
DNAJB12
FBXO11
ICE1
MTMR4
SPAG9
DPP9
SEPTIN9
TEX10
DYRK3
NDUFAF6
PPA1
TACO1
C15orf40
C7orf25
TAF10
PIGF
CRIPT
SPATS2L
TSPAN10
NPLOC4
MTX2
PRKACB
BICD2
CCDC186
ST14
ABCA5
EFR3A
FBF1
SCGB1C2
PKD1
LRRC47
ARHGAP11A-SCG5
ARHGAP11A
CPT1B
CHKB
TADA1
SERF1B
SERF1A
ABL1
POMZP3
CEBPG
MTHFD2L
WAC
MYO5C
DPP8
RPS15A
MSANTD4
GLI4
TEPSIN
NDUFAF8
SMAD5
ZNF326
EIF2AK3
SEC62
KRTAP4-11
SCGB1C1
RMDN1
WAPL
PANK2
SRSF5
NCBP2AS2
NCBP2
SIN3B
IREB2
DECR1
ARHGAP29
USP7
BSPRY
ARHGAP39
HIPK1
ASPH
SMARCE1
ACADSB
CLK1
E2F3
MSRB2
CCZ1
IKZF5
EIF3A
WNT16
GSTO1
SAMHD1
ZDHHC6
VTI1A
ALAS1
EHD4
PKD2
LATS1
DSCC1
BFSP1
PREP
RDH14
RBM42
ESCO2
DSTN
POM121C
MRPL20
PLEKHA3
FKBP7
C8orf33
COPG2
MROH1
ADAR
ETNK1
VOPP1
PIK3CA
ECE1
TMEM139
CASP2
MTDH
SDR42E1
TMBIM4
CLTA
GAN
SUMO2
PDCD4
GPI
JMJD1C
RNASEH2C
TBC1D30
REXO2
RPL13
GNS
CACTIN
TM2D2
ADAM9
MTRNR2L1
LSM6
ARF6
PDP1
RCN2
CALCOCO2
FAM234B
FNBP1
KRCC1
COL4A4
COL4A3
SLC45A4
PIGC
SCYL3
TMX4
PDXK
WWP1
FAM13B
ZCCHC8
RC3H2
MCAT
SLC38A2
SBF1
CRLS1
RBM22
C11orf97
PIP4P1
GSK3A
VAMP3
SAFB2
SAFB
MEIS3
OAT
SEC22C
SS18L2
CLTCL1
CBX2
ETS2
RECK
SMARCD2
PFKM
SENP1
PHAX
MYD88
ACAA1
USP36
YTHDF1
SEC11C
FAM169A
FBXO31
ACOX3
TRMT44
KIAA1586
POMP
RBPMS
C2CD2L
CCDC138
RWDD2B
DYNLL2
KLHL41
MKRN1
TESK1
FARP2
RFT1
FADD
DUSP5
ZNF706
PLA2R1
MS4A1
GFI1B
PRPSAP1
DGKZ
TSC1
LEMD2
RPS27A
CLHC1
MYLK4
ELOVL5
WRNIP1
HPS6
NPC1
IGSF3
TPT1
ZNF623
KDM1A
TEX46
TIGD2
MRTFA
ANKRD46
FAM83D
RALGAPB
MYBL1
TMEM131L
USP33
LRCH3
GPS2
ANAPC7
HNRNPM
RAB11B
ELOB
MICU3
PLEKHF2
FAM124A
NDUFAB1
MRPL38
PLGRKT
OXR1
PRDM4
TBC1D31
RAB4A
ANKLE2
PAWR
RGS22
RPL7A
MED22
EFHB
RAB5A
NOTCH2NLB
OSBPL5
GJB2
DNMBP
MAPKAPK5
ADIPOR1
TMOD3
SLC25A37
TMEM245
EXT1
FERMT1
TBL2
ATP8B1
RAB18
AKIRIN1
PREPL
CAMKMT
MEST
EFCAB14
FLYWCH1
PIAS4
ELOVL7
PGAM5
RC3H1
YPEL2
METTL23
JMJD6
ZNF775
TMEM160
FRG1
RUVBL1
PRELID3B
EEFSEC
UBE2Z
TMCO3
DCUN1D2
RAB5B
SOCS5
PGS1
INTS8
HGS
ARL16
LRRC58
RP9
PAG1
UTP18
MBTD1
DNPH1
PRDM2
TM9SF3
ATP2A2
OTUB1
ARSB
ZBTB10
FEM1C
COX18
SYT1
RAB6A
CXCL2
SORBS2
UBE3A
GLG1
KRT19
PELI1
ARL8A
ABI1
PDPK1
ERO1A
AGO2
ACVR1B
PCNX2
DOCK5
COBL
ANGEL1
HERC3
ANTXR2
VPS13C
TAF5
TSPAN3
MGRN1
RB1
ANAPC11
ALYREF
CYTH1
OCIAD2
RNF169
SCN8A
FANCA
DENND10
UBE2G2
KRT10
MCL1
DOCK1
LBR
SLC25A28
SUFU
ACTR1A
BMT2
FBXO33
PM20D2
UBE2S
NF1
SLC4A7
TMEM175
GAK
CTNNAL1
EGFR
CHL1
NFAT5
SPG11
TBPL1
HMGCR
NEDD1
TRAPPC3
MARCHF6
PEX7
GTSE1
CTAGE6
UHRF2
TOB1
RAPGEF5
P4HB
RPL7
RDH10
MAP7D1
ACTL8
ASF1A
TERF2
FDX1
GMCL1
NT5C2
DYRK1A
RRAS2
VIPAS39
AHSA1
NAMPT
MAP3K3
HSP90AA1
PDIA5
YWHAH
SLC38A10
APPBP2
EPS8
NOTCH2NLA
CYREN
PLEKHG1
NFATC2IP
BZW1
ZNF607
MFSD12
ILKAP
LGALS3
PALM2AKAP2
HNRNPAB
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CLTC
UBN2
NUDT4B
TRMU
GPN2
ZFYVE27
XPA
LPGAT1
SEC63
CLYBL
HSPA4
USP43
PSME1
MAPK9
CDC25A
SMARCB1
CDR2L
FRMD5
FITM1
UBN1
GLYR1
MRPS36
ARID2
HEBP2
ITPRIP
ARFGEF1
GOLGA7
WASHC1
ITM2B
DENND2B
TMEM131
PPP1CB
NT5C3A
CCNT2
GFPT1
CPT2
PSMG4
ALDH4A1
AP3D1
UVRAG
PRIM2
EPB41
RPL22
GPX1
URGCP
MAP1LC3B
SPATA5L1
GATM
OST4
RAD23B
MIS18A
RAB2A
URGCP-MRPS24
STIP1
ARHGEF35
SIRT7
CD9
ATP1A1
AGK
DYNLRB2
RNF145
CNKSR3
SMAD1
TOMM34
LRPPRC
SSRP1
P2RX3
GPRIN1
FAM104A
DCAF12
PSTPIP2
C17orf80
XPNPEP1
MARK2
NHLRC2
DCLRE1A
MICOS10-NBL1
MICOS10
PDCD5
ARHGAP17
KRTAP4-12
CD81
GPC1
ZNF577
SLC38A9
YWHAZ
NANOGP8
ACSF3
LSM11
SMAD3
APEH
ANK2
NUDCD1
ARL5A
FAM86B1
C9orf85
ABHD17B
SPATA6L
PLPP6
SART1
DENND1A
MORC4
DOCK9
CRELD1
DHRS11
MATN2
URB1
MKI67
PLCG2
C1GALT1C1L
GTF2A1L
POLE4
STAT3
CTNNB1
RTN4
LRRC59
PARK7
STX1A
SRPRB
PINK1
DNAJC1
CTPS1
ZC3H4
CLSTN1
NOP9
DHRS1
VRK1
RALYL
TYRO3
MTR
KLHL20
CRKL
OSBPL8
EEF1AKMT2
DERA
SPG7
MAGEF1
SCARB1
SYBU
USP6NL
TSPAN14
STK3
FCHO2
HSPH1
AGTPBP1
CENPC
RABL6
FBXL13
ARMC10
FZD6
CISD3
TPD52
CXCL1
SEMA4D
NAF1
ARHGEF3
MTAP
FAHD2A
KIRREL1
TGFBR2
SOD2
WTAP
PNPO
TXNDC9
EIF5B
MIF
VPS26C
CYRIB
NSD2
NELFCD
TMEM51
C10orf95
TPMT
KDM1B
ANKRD28
ZCCHC14
MTMR12
MTFMT
FKBP4
CCNJ
TMCO4
MITD1
TRAM1
PTPRF
HNRNPU
FAM53B
MIF4GD
RHOC
MIEF1
COP1
KLHL5
COPRS
GALNT12
SINHCAF
SBK1
FAM219B
SDHA
CCDC127
ERRFI1
RHPN1
LRRC37A3
UBQLN1
C6orf226
RNF168
ADPGK
KCTD6
COX6C
STAMBPL1
FUCA2
SLC26A6
EIF3B
CHAMP1
HASPIN
RRS1
ADHFE1
STPG1
NIPAL3
EXT2
ZBTB8A
PGM2
SCD5
HMGB1
CCDC88A
HACD2
EYA1
GHITM
CNN3
SRSF2
MFSD11
TNFSF9
ZC3H7A
HIPK3
SOCS3
ITGA3
ENTPD7
STMND1
FAM153B
PTPN4
FOXJ3
PHB2
ATRN
DGKH
NDUFS6
MRPL36
UNKL
RNASEH1
C22orf39
PPP6R2
HEXB
DBNDD1
RHNO1
FOXM1
RELCH
PIGN
H2AZ1
DNAJB14
CNNM2
MSH6
STX17
SLK
ODF2
PLBD2
FAM91A1
TICRR
TTBK2
GAS8
TADA2B
CCDC96
FAM110C
SCAND1
KDM3B
NT5DC1
EIF2S2
B9D1
DEF8
MRPL12
B4GALT4
ZNF362
ARPC1A
IWS1
C2orf69
KRIT1
ANKIB1
PTBP3
PTP4A2
OTULIN
RPL14
STX3
PLEKHH2
SCRN3
CIR1
TRERF1
DUT
RBM12
CPNE1
MRPL52
ELK3
DUSP6
NLE1
DOCK7
FBXW8
DESI2
NUS1
WASHC2C
QSOX1
ODC1
PROSER1
NHLRC3
COA8
BAG5
PANK1
PRPF19
MLYCD
COTL1
JPT1
CDCA7
COG6
NDUFV3
PDZD8
TANC2
TEAD1
PWWP3A
CCDC178
IRAK2
GATAD1
PISD
HDAC1
PRRC2B
YES1
MARCHF8
UBFD1
EARS2
FBXO42
RNF139
DDHD2
DDT
CAPN2
RCL1
MEF2D
EMC8
COX4I1
PCDHGB1
PCDHGA4
TAF9
RAD17
AK6
OSBP
POMT2
GSTZ1
FEZ2
LYRM1
DCUN1D3
ROCK2
UAP1
SLCO4A1
DPYS
TGFB3
IFT43
POPDC3
CYP2A13
DSTYK
TMEM202
CCNY
ABLIM1
TBC1D5
SLC17A5
PSMD1
USP1
SPOPL
NANP
EIF4H
DLG4
MPP5
NCOA2
NDRG1
FAM135A
ACADVL
AEBP2
TBXAS1
PARP8
HIPK2
H2AX
SH3GL2
CHD5
HSPE1-MOB4
HSPE1
HSPD1
NEK7
CELF1
GPT2
SCN11A
RANGAP1
WDR48
C1QBP
ARF1
PPP1R9B
TBC1D14
ZBTB20
POLR2D
EZR
SPIRE2
TPST1
BPHL
RAI1
CUX1
UBALD1
NEO1
STIMATE-MUSTN1
STIMATE
DAP
SMC4
IFT80
SOHLH2
MNT
UBAC1
ARNTL2
TOMM22
PDCD2
UROD
HECTD3
PLA2G2A
MBNL1
RTRAF
DDX21
CRY2
STXBP4
COX11
TRIB1
STRN
GSKIP
ATG2B
KDF1
CSNK2A1
ATP13A2
ACTR5
SLC12A5
ERI3
HOXB9
SERINC2
OR4K3
DFFB
CEP104
NBEA
PKIG
TNPO1
CHIC2
KCTD9
CDCA2
DTD2
TBCCD1
DNAJB11
ZBTB4
SLC35G6
POLR2A
DLG1
IDE
THAP12
GVQW3
STRIP1
SDCBP
PPP2CA
DBNL
HMGN2
UBE2D1
CERS6
CCT2
EXOSC10
PEX2
INO80
ZC3H18
ZNF704
TJP2
SRPK1
STX7
SLC25A25
ATP11A
SEC16A
C9orf163
AFAP1
SLX4
EIF5
LOC389199
SETD7
SRP72
NAIF1
SH3PXD2B
ZNF134
TRUB2
COQ4