ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945294 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◣ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
TNFRSF6B
THEM4
HLA-DPA1
YPEL3
SLC27A5
C16orf54
VHL
SMIM31
IRAK2
GCNT7
FAM209A
HELZ2
ACAA2
DUX4
LMLN2
NARF
CYBC1
SNCG
MMRN2
TRPM3
BAGE4
BAGE
BAGE3
FRG2C
ZNF605
TMEM62
LEP
RBPJ
RFPL2
BEST2
EFCAB10
OR2G2
COL23A1
FBXO31
SUPT6H
SDF2
BCAT1
SERPINF2
PIK3R1
PCGF3
ESR2
TMEM89
CYP17A1
BAAT
RTCA
YWHAZ
DEK
BHLHE41
ST20-MTHFS
TXNRD2
SLC38A9
IL34
KSR2
CNOT3
ZNF324B
KCNJ15
FAAH
CCDC13
SCCPDH
NUDT4B
ADI1
HTR2C
GSTM5
GFI1B
KLHL29
NSUN7
C1QA
SPATA45
ZNF546
ZNF611
FAM153B
THSD1
RTN1
CD200R1L
CCNT1
ATL1
MAP4K5
FGF9
EFHB
RAB5A
HACL1
BTD
ACSM2B
TMEM229B
MTOR
ANP32D
APOL4
FAM227B
DTWD1
TMEM42
PRSS38
H3-2
KRTAP5-1
CCDC83
PHOSPHO1
SIVA1
CCDC126
FAM184A
PDSS1
TATDN2
SARAF
PES1
YY1AP1
DAP3
PDCD7
SLC2A7
GLO1
HEATR4
KCNJ2
SLC25A38
DGLUCY
CRTC3
UBE2F
MCC
ZNF562
FAM104B
HSD17B4
PDGFRL
C1GALT1C1L
GPR39
THAP6
ITGB3BP
EFCAB7
IQSEC3
BDH1
BARX1
MON2
GORASP2
SATB1
FRG2
LOC643802
REM1
DEFB124
ACOT6
EDEM2
ZNF792
RFC1
AKAP10
TKTL1
TEX28
ZCCHC8
OAZ3
PRKG1
MMACHC
CCDC163
RORC
C2
RPL32
ZBTB12
EHMT2
CALD1
RNF208
DPEP3
TSC22D1
SLC35G3
PRKAR1A
PROS1
CXCR2
ATP7B
ALG11
UBXN2A
IGFALS
BCR
CLEC12A
CKAP5
CASP4
TRIM33
CD248
MS4A12
HIVEP3
HSD17B6
ST6GALNAC6
HYOU1
APOBEC3B
AUH
KRTAP5-7
MSH2
SLC30A8
ZFP92
ARHGAP19
S100A5
S100A4
S100A3
NNT
TRIM36
FUT3
FRMD4A
ZNF446
ZNF324
ZNF134
EIF1
SLC35F2
TBC1D8
ACYP2
QSER1
TMX2
MED19
PRSS22
UGT1A3
TSGA13
TCHH
CASP10
TCTN3
DPP4
ATP9B
DPY19L2
NCOA5
ACTL10
C20orf144
IAH1
ZNF264
IQGAP2
MRTFA
ZNF577
TTC5
CERS5
TBC1D30
RTP1
L2HGDH
DMAC2L
TCAIM
NPFFR2
S100Z
PALLD
KRTAP20-4
ADCY10
PRDX3
SMCO1
PPDPF
UBE2O
AANAT
ZNF841
NR6A1
GRK6
FEM1C
REN
ANXA3
LBR
TTBK1
FASTKD1
ZNF114
GPD1L
TTC38
PKDREJ
PACS1
VN1R4
ZNF419
LMBR1L
GBE1
KLHL41
PHB
GATAD1
SARS2
MRPS12
FAM25E
TMEM14C
ME1
OAS1
ABCG1
MEF2D
KLF17
LOC728392
TMEM161B
JPH4
PSEN1
OR1E3
ST8SIA6
COQ10B
VLDLR
RTP3
UBE2J2
DHRS4
PGBD1
ZNF554
RAB1A
NECTIN3
CLDN4
SH3BP5L
PDE8A
RAP1GAP2
CNOT11
SLC25A48
UBE4B
ADA
ZNFX1
SLC35G5
GRAP2
DLAT
IFT88
PSMB2
LRCH1
BSDC1
C12orf29
C12orf50
CATIP
TRAK1
LAMP3
HRH3
HYAL1
RANBP9
C2orf88
ZNF624
B4GALNT2
PSG9
USP28
SLCO1B3
GCNT1
LRTM2
FLYWCH2
DNASE2
KLF1
P4HB
ZNF761
METTL8
DCAF17
ZNF329
PMM1
OR4K17
NFE2L3
TMBIM4
PLSCR4
ANTKMT
TMEM202
ZNF629
ZNF804A
ZNF280D
ZNF441
EEA1
TSKU
AADACL4
ZNF117
IPP
GOLGA6L2
THSD7A
MORC2
RMDN2
THOC5
INPP5F
CNKSR2
NFRKB
TAS2R3
ARRDC2
PRKAR1B
RTL6
GPR82
SWI5
GOLGA2
DOK7
CEP72
ZNF583
ZNF426
NAT8
C5orf24
UCKL1
GAS2L3
TBRG1
LYPD1
DLK2
NUBPL
SAXO1
ASIC5
SGMS2
EIF4E
PRKAA2
KRT82
SEPTIN11
SULF2
IL36RN
IL36B
HCN1
DUSP6
PPP1R3B
RAB30
PRAMEF33
AKR1B15
PRIM2
NOD1
GPR68
ABHD3
SAMD5
NUDT9
RPE
ZPBP2
IKZF3
ALDH7A1
MSLN
CFHR4
ARL13A
POTEE
TRIM69
SAV1
HGD
OR8B3
YWHAQ
HDAC2
APLN
DGKQ
EXO5
NOS3
OR2AP1
PTPN12
RAB29
ZNF44
CMTM3
ARHGAP22
SYBU
TMEM131
NF2
MERTK
DGKK
SNAPC3
KCND3
BCAR3
MMP16
GSDMD
KCNK3
VSTM5
TBCK
AIMP1
EYA1
CDC42BPA
TMEM52
CALML6
TSPAN14
SLC6A5
GTF3C5
CSNKA2IP
ZNF160
SLITRK4
CCND1
TEX50
TRIM38
WBP4
ELF1
PINK1
H4C8
KCNE1
PRELP
KLRD1
PIP4P2
MEST
POTEF
ZNF74
NR2F1
PPAT
PAICS
ITGB2
COLEC11
CNGA1
NIPAL1
RAPH1
USP43
EBF1
PANX1
DNAJB13
ZNF488
CNTNAP3B
OSR1
SULT4A1
EHD2
MTMR9
TACC1
FSTL4
SLC8A3
CANT1
SRSF7
RAB6D
PTPDC1
THAP4
ATG4B
NOVA1
ZNF676
RFPL3
PDE6B
MAP4K3
RASA3
MOK
NTM
STK19
DXO
IQCF2
UBLCP1
FBXO16
FZD3
PAK1IP1
C6orf52
ZNF250
RNF144A
CP
CYP7A1
TAAR9
FAM107A
RNF168
ERN2
EPHA5
CLUL1
RBMS3
TMC5
LY6L
ITPRID1
FABP6
SUZ12
CAAP1
FAM155A
PLD5
RNASE10
TADA1
H4C11
H4C12
P2RX6
OR4K3
PDE2A
ASPSCR1
SEMA3D
PLOD2
COX8C
CTAGE9
WDR61
IL17RC
ST6GALNAC4
OR7D2
CEP85
MRPS36
PAM
CHODL
ZNF211
ATP12A
USP17L20
USP17L22
PCGF6
NCK1
MYRIP
DCLK1
SPATA18
KCNIP2
HES2
ESPN
LRRC45
CENPX
EPS8L1
ALDH2
BGN
ZNF561
SYN3
CADM1
TMCO3
DCUN1D2
EFCAB11
NEUROG1
TDP1
CHFR
KRTAP5-4
KLHL40
SLTM
LRIG2
ZFP42
ZNF221
MRGPRX3
TULP4
THUMPD3
MCM10
DUXB
DAPL1
OR6A2
MS4A18
CCDC74A
SPIN2B
LRCOL1
ZNF442
MAGEF1
ERVFRD-1
OPHN1
SLFN11
GAS7
PJA2
TEDDM1
TCFL5
ZNF414
TMEM40
DUSP16
MSL2
PRUNE2
ZNF860
OSBPL10
TGFB1I1
EXTL2
ERBB3
RRBP1
CTNND2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
OR6C4
IQCF1
CHORDC1
LIMD1
ASIC4
YAP1
LYPLA1
RBM5
CRY1
ASNS
ORM2
ORM1
CCDC42
SH3KBP1
RIOX1
MMEL1
ERICH3
MPHOSPH8
MECOM
CNTNAP3
PASD1
SOWAHB
TMOD1
NEUROD4
PHETA1
NAT2
ADAMTS15
GRIN2D
CHST3
SCN4B
ZNF784
FZD1
C1QL1
FAM50B
HEATR5B
GPATCH11
SST
DHRS4L1
HSD11B1
CD80
RPL11
PRRC1
NANOGP8
MGLL
CHRNA3
LORICRIN
DHRS4L2
BTK
VAMP1
PRRT2
PAGR1
ZNF496
DHRS2
ST8SIA3
ZNF692
CNTN3
FLVCR2
ADAMTS16
PRKAG2
ORC4
MBD5
PDZRN3
COX10
DCTD
ARF6
KDM4E
CD101
TEX49
KLF3
METTL21A
PKMYT1
FGF18
CTAG1B
CTAG1A
EXOC2
TLR1
CAMSAP2
CLEC6A
SEL1L
SULT1C3
KDM1A
PIGZ
BRCA1
H1-7
DNAH8
DPM3
EFNB2
FILIP1
MSMO1
RYBP
RFWD3
CCDC177
GALNT13
SYPL1
B3GNT2
SLC17A7
SMCO4
SLC25A26
ZEB2
TEAD4
MBOAT4
RNGTT
CFD
SLC35E4
NDUFV1
SNCB
EIF4E1B
DLK1
EML2
IPO5
DNAJC13
FGL1
OR8S1
OR13C4
CATSPER2
GLT6D1
TUBGCP5
SIGLEC11
LCE5A
CRCT1
RESF1
ZNF563
TMCO6
SDK2
GALNT1
NEGR1
ACOT2
SSX2IP
SPOPL
HLCS
RNF220
SUFU
ACTR1A
KLKB1
CALCB
POLE4
NRBP2
C11orf86
MMAA
STRBP
VGLL3
MGAT4A
ENG
FBXL12
UFSP2
C4orf47
C8orf76
BOLA1
NRSN2
NAA20
PIGK
SLC6A8
PNCK
ADAMTS3
CLSTN2
ITLN1
KIF2C
CORO6
NOA1
FAM102B
WDFY2
GNG2
IL32
FUT8
OLFM3
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
BNIP1
ZNF668
LRRC6
LXN
RFX5
ADGRG7
HIVEP1
PDE11A
BACH1
SCRIB
PURA
OXT
LSS
SRD5A3
PLGRKT
ACADM
PYCARD
VAMP8
FANCI
CTAGE15
PIK3CA
NOP53
PKD2
SCUBE1
FGD3
ZNF302
EEF1AKNMT
LTC4S
ZSCAN5C
TARS3
COL26A1
R3HCC1L
AGGF1
ST6GALNAC5
ATP2C1
PSD4
LMTK2
MIA2
OR2AT4
ANHX
ZNF670
PPARD
CDA
KBTBD6
ZNF780B
PDE1B
ZNF592
NOS1
MAST2
IL1R1
ACBD5
CT45A10
NLRP2B
STX2
FABP7
ZFP37
TP53BP2
TSPAN18
RBMS1
CROCC
UGDH
PSG5
MFAP4
TLR2
ZNF557
ELMO1
CAB39L
SETDB2
OVOL2
LRP8
TMEM35A
SLC6A1
YJU2
CRYM
PDE4A
TEC
TMEM237
DPP6
SLC5A8
PRAMEF10
GUCY1A1
A1BG
LARP1
UBN2
SCLY
PGAM1
ADAMTS9
LONRF2
ANO6
DNMBP
SEMA6D
NCOA7
NSMF
ATG16L2
ALAS1
TENM4
UBQLN2
ADAMTS5
SIX3
PLSCR2
ZMYM1
TSSK4
UTP14C
STN1
CLIP4
GDNF
DNAH3
VBP1
TDRD3
FERMT2
CYB5A
LGR6
ZNF148
THNSL1
PAPSS2
SPACA6
CFHR1
SLC35A3
C5orf34
NGDN
ART1
ANKEF1
ART5
TRIM56
MX2
GALNT2
ASRGL1
COL2A1
RDH16
RCOR2
ABL2
TTC9B
ZNF888
CDH10
ARID4A
LRRC2
GABRA2
CORO1C
ZNF567
GSTK1
PTPRN
ILKAP
GJC3
ARPC1B
H2BS1
PRR23D2
PRR23D1
HINT1
MCF2L
DLG3
CFHR2
SH2D4B
AP3B2
SYNJ2
DMRTA1
ACTR3C
RAB23
DDC
MAP2K1
KCNS1
ATF4
MX1
PIK3R4
SHROOM1
RORA
ZNF662
MYOD1
PXDN
PIN4
CRH
BCKDK
TOMM22
CYREN
DGKA
DEFB108B
UGT8
SPATA4
PYM1
CMPK2
NPHS2
NDUFC2-KCTD14
NDUFC2
AMACR
FOXRED2
DYSF
MARK3
STRA6
PSG8
MYH6
GTF2A1L
NFE2
ZNF485
ACSL1
OR5L1
TRPM7
FAM240C
NR2F2
ZNF679
ZNF439
RNF141
PPEF2
CLEC4C
BHMT2
IRX2
C5orf38
NUPR2
RNF215
SAP130
MS4A13
CLDN20
GAS6
GSTA4
CTNNA3
CNPY3
MTFR1
TACR3
PLXNA4
FBXO17
CD14
RCAN1
SLC35E2A
HERC6
SURF6
TTYH2
OSBPL1A
GPC5
KLRB1
SCHIP1
SORCS2
PCDHAC2
GNAS
BCL11A