ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150671 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
APOA1
ITGB3BP
EFCAB7
SMCO1
AADACL4
C19orf18
GTPBP6
MAPRE2
DEGS2
RABGAP1
YPEL3
TBX6
ZNF572
STC1
UBE2F
DUSP6
MTRNR2L8
ZNF623
KRBA1
RABGAP1L
SF3A3
RBBP5
YWHAQ
PTDSS2
ANO9
DHRS2
GCNT7
FAM209A
GALNT1
COL18A1
ARHGAP39
RCAN1
PDE11A
ZNF829
ZNF568
ZFP30
MTF2
SUMO3
ATF7IP
TMEM229B
NUF2
COX16
FAM184A
ZNF32
TMEM89
CANT1
TMEM132A
SAMD4B
GABPB2
GBA
MSRA
MROH7
PRSS38
KDM3A
DUX4
THEM4
SLC33A1
NDUFB3
FAM126B
MTR
DKKL1
OPRL1
LKAAEAR1
ZNF117
RPL27
PAXBP1
TBC1D19
ISY1-RAB43
ISY1
SUPT7L
SLC4A1AP
SSBP1
DISP1
ZNF772
ANP32D
RBM33
ATP5MC2
GLIPR1L2
DBNDD2
ACTL8
DNAJC25-GNG10
DNAJC25
CALCRL
TTI2
COX7A2
RNF125
UTP3
COL4A5
COL4A6
PRRT1B
TFPT
PRPF31
TRIP4
ZBED9
ARID1A
ZNF408
ARHGAP1
TBL1X
EXTL2
AURKAIP1
DMAP1
KRTAP5-1
GTF2H4
SLCO1A2
GYPC
CBX1
TLR2
DNAJB12
UFC1
SULT1C4
JMJD1C
ZNF324B
ZNF571
ZNF540
AHCYL1
RPS7
TM2D1
RPS29
NOP16
HIGD2A
ALG14
LCN8
CREM
CEP85L
COMMD2
GRAMD4
LARP1
ZNF577
ZNF461
HDAC8
MMACHC
CCDC163
PPIP5K2
GIN1
ZMPSTE24
COPS4
VTA1
NMBR
CCDC59
RERE
LIMK1
FBXW7
AASDH
GADD45A
SLC1A7
CD14
TMEM14C
ZNF20
ITFG2
ZSCAN22
RAB30
NUP107
CACNG1
MED23
OR4K17
PIH1D2
NKAPD1
MIS18BP1
CFAP298-TCP10L
CFAP298
HEATR1
MNAT1
TEX50
CNIH4
IRF2BP2
SOX30
TEFM
SCMH1
ILF2
TTC26
ZNF501
CAT
LPIN1
EIF3F
MRPL1
TTC32
PEX3
ADAT2
NDUFS7
TMEM242
BRF2
CDK14
POLR3B
GRPEL2
SPANXB1
PAFAH2
COL23A1
TACO1
TRMT11
WDR11
TRMT5
SLC38A6
TMEM259
CNN2
STAT3
EPHA3
DDX41
MTRNR2L2
MSH3
DHFR
ZNF165
NME1-NME2
NME1
YJU2
MRPL48
ELFN2
KDM1A
TEX46
RCAN2
EPRS1
HLA-E
AMD1
CDK19
RAD51AP1
C12orf4
AP3S2
SAR1B
RNF187
CLTB
C8orf37
GTPBP3
ANO8
SLC25A53
HAPLN2
KRTAP10-1
FAM234A
ELFN1
SELENOH
PIKFYVE
ZNF391
EIF2S1
ATP6V1D
B4GALNT2
IRAK2
RPL37
NEMF
CDC5L
PPRC1
IL17F
BORCS7
INTS2
PUS10
PEX13
POLR2J3
ATG4C
RPS26
MAST2
BORCS6
INTS5
ARID3B
FAM13A
ZNHIT6
TRAPPC8
MYO1H
RBBP9
LGALS3BP
REXO4
ADAMTS13
RAB18
MAN2A1
FOXO3B
ZSCAN30
TNFRSF1B
IGFALS
IARS1
BAIAP2
EIF1AD
BANF1
ZNF383
CPPED1
CCNI
BMS1
CRYAA2
CRYAA
SPRR2F
CCDC174
SF3B5
MBOAT4
HTRA2
DQX1
HAX1
CNGA1
TATDN2
MITD1
RAG2
IFTAP
IL36RN
IL36B
DUSP14
SMG8
BCL2L13
MLPH
SLC45A4
SNRPD1
GSR
SAMD1
RNF217
PCDH15
FRA10AC1
WBP1
INO80B
DHX16
GOLGA5
FAIM
LSG1
CCDC107
SLC24A1
INTS14
MMEL1
ZNF791
ZNF490
TNPO3
NOL8
CENPP
EIF2D
NEU1
PPIL3
NIF3L1
MRPS23
RPL5
SHOC2
BBIP1
ZBTB25
ZBTB1
GABRR2
NOS3
TRMO
GLI1
C2orf88
EFHD1
NR1I2
CPD
MED18
TTLL12
DCT
CWC25
SLAIN1
APOBEC3B
MAMDC2
SPAG9
TMEM41A
ZNRF4
AP1G1
RPA2
SPANXC
POMGNT1
LURAP1
KRR1
HTR5A
TMEM44
TMEM79
SMG5
SMG7
VPS35L
MRPS18C
HELQ
SNRPD3
GUCD1
EVPL
LUC7L2
FMC1-LUC7L2
FMC1
RTTN
RPS3A
PLCH1
ELAVL2
RBM45
VPS52
RPS18
B3GALT4
ZNF790
SIAH1
ENG
LRRC49
THAP10
RNF207
LRP6
KDM5C
MOB4
CCDC97
GALNTL5
PDCD6IP
ZNF518A
CSRNP3
SGMS2
PDE1A
DYRK4
NID1
PNPLA7
CDYL
ARMC7
DRG2
PPP6R1
SNIP1
DNALI1
LRCOL1
PNMA2
DPYSL2
REEP3
SKP2
LMBRD2
PES1
TUT1
TMEM101
TARS3
PACSIN2
PPP1R11
GTF2H2C_2
GTF2H2C
ALKBH3
ZSCAN25
FDXACB1
C11orf1
DCLRE1B
AP4B1
FAM13B
ZNF570
ZNF569
NCOA7
ARMCX5-GPRASP2
ARMCX5
UBR2
CCNC
KRTAP10-9
DCP1A
PDGFD
ZDHHC6
VTI1A
MAP3K14
GSTA4
ZNF226
RFFL
RUNDC3B
SLC18B1
RAB5IF
TTC39C
TIAM1
AARS2
RIF1
TUBB
MDC1
DSTYK
ATG5
ZNF793
POLG
FAM199X
GPRC5C
CFHR4
INO80C
IRF9
TMEM275
ZNF134
GMEB2
ZMYND8
INSYN2B
NECAP2
PNISR
DHTKD1
MRPS16
POLDIP3
TMBIM6
WDPCP
MDH1
TIGD2
PARP2
FAM124B
WDR74
RANBP2
ZNF585A
WDR36
ARID5B
OSGEPL1
LONRF2
RPS13
SCNM1
LYSMD1
LTN1
TOMM20
IL36A
PLA2G2A
NTN1
FAAP20
TAF12
GCNT2
CSNK1E
DOCK3
GORASP2
TRUB2
COQ4
SYT1
SOBP
CTAG1B
CTAG1A
LRIG2
TPM3
SLC39A9
ERH
CFAP20
DNM2
MTOR
SLITRK5
ALG10B
KANSL3
FER1L5
SEC23B
CREB5
DAPK3
KIF12
HBS1L
CALCB
PPIG
ZBTB45
TXN2
SDR42E1
THG1L
BRAP
ACAD10
HTR3A
MTBP
MRPL13
PSMD9
HPD
ADCY10
ZNF566
ZNF292
POC1B-GALNT4
GALNT4
ARRB2
RPS14
ZNF546
CSTF2T
SLC39A6
ZNF688
CCDC120
CLPTM1
CNPY1
KAZN
STX1A
PLK2
STX18
PLK3
TBCB
NME4
SNX27
SSH2
FAM89A
EFCAB5
ACOX3
TRMT44
SPSB1
RIPPLY3
HEBP2
CLASP2
SNRPE
ZNF350
ZNF841
PNPO
ZNF302
AIFM1
RPTOR
GSTP1
UTP25
TMEM72
DEDD
PTCHD4
MRPL54
APBA3
ZXDC
GSTM5
UBOX5
FASTKD5
TXLNB
AJUBA
ATP5F1B
IL21R
KLHL20
GTF2B
NRL
IFI6
ANKRD13C
DCAF11
BANP
CC2D2B
MED11
OSGIN1
CEP120
SIKE1
VPS45
ARF1
COA6
NSA2
GFM2
CDIPT
POLR1H
DCP1B
LRFN3
NUP205
CHID1
SF3B6
FAM228B
TPK1
TMEM30A
RAF1
CREBL2
NFKBIL1
ATP6V1G2
DDX39B
NR1H3
ACP2
OPA1
RMND1
ARMT1
RPL7A
MED22
SURF2
SURF1
TRIM5
TRIM22
CTSK
ZNF317
ALG10
CHMP7
PRSS41
CD2BP2
S100A13
S100A1
PRIM2
GRM4
SLC4A8
KDM6B
GALNT6
AKT1S1
CALD1
PRRG2
NOSIP
CYCS
SLC35A3
SUGCT
MPLKIP
SREK1IP1
CWC27
GALK2
COPS2
SLC35B1
PPIH
IRAK1BP1
FBXO44
FBXO2
REN
FRRS1
PEAK1
HMG20A
GTF2H2
TSFM
TPR
ODR4
PDE10A
RWDD1
CDK5RAP1
SNRPB
LOC102724265
TMEM107
TMEM208
LRRC29
RNF146
CORO1C
DNAJC16
CASP9
TLR3
SRP9
STOML2
RIMKLB
TRIM46
KRTCAP2
FOXP1
FEM1C
PDCD7
TNFRSF19
ZNF331
PPOX
COIL
ZNF687
NEK2
MXI1
JUN
CNIH3
DDX18
AGPAT3
TMEM128
CCDC130
PLAC8
CCDC115
LOC100421372
HSPA14
CDNF
FLRT3
CORO2A
SLC30A6
RPAP2
GLMN
ZNF48
MYLPF
SEPTIN1
BCAR3
PDE7B
IPP
CCDC124
ZNF442
TIMM9
KIAA0586
YTHDC2
UCHL3
COMMD6
VPS33A
MAD2L1BP
ZNF527
GTPBP2
ARTN
C6orf118
NHS
LSM5
AVL9
HDAC2
ECHDC1
ANXA11
C11orf65
SBNO1
OSGEP
APEX1
ERAL1
C3orf14
TTLL1
ZNF561
NOL12
PRPSAP1
AMACR
FNTB
BCL10
GLIS2
WDR55
STAT6
RPS12
SLC43A2
LMNTD1
ADNP
EMILIN1
B4GALT3
CLN3
APOBR
TMA16
CCNL1
USO1
APOL2
ZFYVE1
APRT
HIPK1
SCYL3
SNCG
MMRN2
TTC3
RGL2
SLFN12
B3GALNT2
SLC2A7
HMGB1
USPL1
SLC41A3
C2CD5
CDK12
ZBTB8OS
RBBP4
LURAP1L
DRAM2
CEPT1
SH3RF2
TLE3
ATP1B1
ZNF56
IARS2
BPNT1
SOCS6
ST6GALNAC2
CEP85
TATDN3
NSL1
TDP2
ACOT13
PLEKHM3
ARL14EP
AAAS
RSPH3
FAAH
SCAND1
SOD2
WTAP
C11orf49
METTL18
C1orf112
GPN3
FAM216A
HIGD2B
BBS4
CD55
ZNF345
SULT1C2
SNAPC5
FABP6
MRPS31
SERPIND1
NR1H2
DYNLRB2
LAMTOR5
CALHM4
CLEC12A
TMED1
SNX17
EIF2B4
LIN54
TSTD3
NBPF1
NAT10
ACTR3
CHST4
MIER1
GOSR1
AP3B1
DNAI4
UFL1
TCTEX1D4
BTBD19
SRCAP
LOC730183
CSTF1
AURKA
SDHAF3
CUL5
DPYD
UBE3B
CGGBP1
TAF13
C3orf38
SRSF11
LRRC40
LMNA
TFB1M
PBX3
NPAS4
ZNFX1
LIG3
INKA2
DDX20
BRMS1
B4GAT1
CTH
EXO1
CEP162
COG2
HMGCR
AKR1A1
IPO4
MRPL40
HIRA
RRN3
CYB561D1
TTC14
GTPBP10
INPP4B
SMIM13
ABLIM1
ATP1A1
ZNF385A
CRNKL1
CFAP61
IGFL4
MTIF2
STK32C
SFXN2
ARL3
BCL6
GLCE
ABCD2
MEGF8
MEIG1
DCLRE1C
SESN1
CEP57L1
ZNF286A
VPS25
SRP54
SYNJ2BP-COX16
SYNJ2BP
FKBP8
ZNF221
ICA1L
TTC30B
GRAMD1B
RSPH4A
TOR1AIP2
TOR1AIP1
NUP54
CCNT1
NEK4
KIAA0319
TMEM247
LACTBL1
CYB5R4
STK40
TSKS
AP2A1
SFSWAP
COMT
MAP3K7CL
CCT8
EFR3B
PHIP
MAGOH
CRY1
ASXL3
RGPD2
RGPD1
TPM4
MRPS33
SPATA5
NUDT6
PDE12
RPL26
ZSCAN26
AFG1L
SPAAR
TTC38
PKDREJ
CCDC200
PXT1
KCTD20
HAUS6
ASF1A
SHC3
ZNF2
PSMF1
SMU1
CCDC33
PRDM1
WDR5B
RIMBP3
USHBP1
RUVBL1
AQP10
PCBP2
SPG7
GPATCH3
ATP8B2
GRN
ANKRD6
BVES
MAD1L1
ANKRD54
EIF3L
DHRS13
TMEM116
ERP29
ELOVL1
PRR14
FLOT2
RANBP17
SULT2A1
CUL2
RNF220
PLPP5
GPATCH4
NRDE2
DEK
R3HCC1
FKBP5
HECTD1
H4C15
H4C14
TMEM138
CYB561A3
SNRNP35
CEP350
IL1RAP
OAZ3
VPS13B
MAST4
PSMD6
MRPL9
CCNG2
BAG6
APOM
TMCO3
DCUN1D2
HDLBP
COA7
QRICH1
ATG101
PLS1
VPS29
RAD9B