ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX553665 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◣ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
FRG2C
FRG2
KCNJ15
THEM4
ZNF512B
CNOT3
SULT1C3
ANP32D
LMLN2
CFHR4
TLR2
SNCG
MMRN2
SUPT6H
SDF2
MAD1L1
PIN4
RBPJ
APOBEC3B
COL23A1
C1GALT1C1L
PPP1R3B
ZNF117
IRAK2
SARS2
MRPS12
CALCB
CADM2
C2CD4C
COLEC11
MBOAT4
C16orf54
OR6J1
DUX4
GCNT7
FAM209A
BAAT
REM1
DEFB124
GORASP2
NFE2L3
LEP
CYP4F11
DBNDD2
PRDX3
BCAR3
ATP9B
DUSP16
SMCO1
CTAG1B
CTAG1A
TMX2
MED19
MRTFA
CASP10
VN1R4
LSS
CLDN4
GPD1L
KRTAP5-2
RBM5
ZNF761
PRSS38
ENPP1
UBE4B
ZNF566
INPP5F
DGKQ
TULP4
CYP17A1
MRAP2
SIVA1
FGD3
GCNT1
ACSM2B
C2orf88
SATB1
GSTM1
SEM1
IQCF2
LRIG2
OR1E3
TMEM44
CCDC149
BCR
RPL11
NARF
CYBC1
PNPLA7
EXTL2
RFC1
H4C11
H4C12
B4GALNT2
TMEM202
SRPRB
FASTKD1
PSPC1
ZNF577
RAB6D
TXNRD2
ALDH7A1
SLC2A11
TBC1D5
SMIM31
SLC2A7
FEM1C
RMDN2
CYP4X1
MON2
OR2AP1
ANXA3
EML2
GSTM5
PDCD7
OR8B3
ADCY10
PSEN1
OR4K17
ZNF324B
ACSM2A
GTF2A1L
ACAA2
SCCPDH
DLAT
FAM184A
SLC38A9
MPHOSPH8
TFPI
RTP3
TNFRSF6B
NUDT3
THOC5
PIK3R1
RTCA
CCDC83
ZNF677
VN1R2
OR1J4
PHB
VCX3B
AMDHD1
ZNF280D
LBR
ZNF792
STK19
DXO
TMEM62
H1-7
BCKDK
OR7C2
SEC63
TMEM68
TGS1
SLCO1B3
PUS1
ZNF562
PRKAG2
HLA-F
HYOU1
DCTN4
ERBB3
LMBR1L
ARRDC2
HNRNPL
OMP
ADI1
THOC2
KRTAP12-2
ABCC10
PLSCR4
SDR42E1
ZNF329
DDC
SLC35G5
CELF2
CAT
TAAR9
SEL1L
CCDC38
KRTAP10-8
APOL4
CEACAM21
LRTM2
TMBIM4
CTNND2
PTGES2
MRPS36
GLT6D1
AADACL4
USHBP1
STK32C
ZFP42
GTPBP6
PDIA2
GTF3C2
POLH
XPO5
GASK1A
PPP2R5A
CLEC12A
IL34
SLC35G4
CTAGE9
PIGZ
ERICH3
SRSF7
CCNY
SLC27A5
NRBP2
WWTR1
CTAGE8
CTAGE4
CD14
KLHL41
GINS1
VCX3A
COX8C
UGT1A3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SPAAR
FBXO31
LIPA
EHD2
DCTN6
CD248
BDH1
PRAME
IGFALS
PTPDC1
TTC5
TRIM69
MTRNR2L1
C5orf34
IL1RL1
FABP6
KLRD1
KRT82
DNAH6
KRTAP10-4
LCN8
IL36RN
IL36B
ST20-MTHFS
RNASET2
SH2D4B
MSRA
SYN3
FBXL12
CYB5A
SLC25A18
SNX16
CASP4
USP17L20
USP17L22
ZNF557
PDE11A
PRPF8
PDRG1
NANOGP8
FANK1
MKRN3
CDC14C
PLGRKT
CT45A10
SLC35G3
PRIM2
LCE3A
RABL6
C3orf14
KIF2C
ZNF114
EIF4E
TEX19
IAH1
C1QA
ZNF426
SH3BP5L
SPRR2F
PTPN12
YJU2
PHC2
PFKFB3
HYAL1
RTL6
CPA1
EIF4EBP2
TBCK
AIMP1
TTYH3
VCX
MS4A13
GALNT1
LGR5
PPEF2
CDYL
MS4A1
GOLGA6L7
RNASE10
TTC38
PKDREJ
ARL13A
ELAPOR2
PRKAA1
COL26A1
CFAP73
SULT1B1
GAS2L3
OAZ3
EFCAB10
CLDN16
TM4SF1
BANP
SLC41A3
MEST
NSUN7
RAB29
BRMS1L
KMT2A
CLEC4E
ZNF485
USP17L18
USP17L11
USP17L21
USP17L12
CD200R1L
ASPSCR1
TAS2R4
HSD17B4
SERHL2
PPARD
NOC4L
CHODL
ZNF550
USP17L15
TEDDM1
UGDH
ZMYM5
TLR1
DEFB108B
SPARCL1
TUBAL3
FANCI
NAT8
OTUD7A
SGCE
PEG10
ARHGAP40
RDH16
ART1
OR1D2
CYP2C8
ZNF623
CRYAA2
CRYAA
TMOD1
PRSS41
C9orf72
CYP1A1
CLK4
SERPINF2
SET
CRY2
PDGFRL
ZNF582
GCSAML
LRRC74A
ADAM20
ABHD3
LGR6
ENOSF1
IQGAP2
TNFRSF21
CATSPER2
SLC22A1
METTL16
ZNF699
FAM25E
GCNT3
SLC25A48
CRYBB2
YWHAB
ARHGAP39
ACOX3
TRMT44
GINS3
ZNF398
ZNF425
CCS
CCDC87
NEUROG3
HGC6.3
HEATR4
BTNL10
ZNF572
RANBP9
CD47
FAM240C
HSD17B6
GLO1
ANK3
AHCY
IFI44
TAS2R13
ZNF584
NME2
C19orf18
DNAJB13
YWHAE
PTCHD3
GP5
TUBA8
NPFFR2
GPR50
TACC2
PRKAR1A
AKR1D1
OPRL1
LKAAEAR1
COL18A1
HTR1F
LLPH
MATK
CRY1
PLCXD1
SCGB1C1
CDC16
OR5L1
TSPY8
TSPY4
TSPY3
TSPY1
TSPY10
NNT
TEX49
AUH
UBLCP1
REN
PCP4L1
PGK1
SLC35E4
VCX2
ZNF610
ORC5
TAF13
YPEL3
BSDC1
ITGB3BP
EFCAB7
UBE2F
MTRNR2L8
KRBA1
TMEM89
TATDN2
RABGAP1
APOA1
TBX6
MTRNR2L2
DEGS2
MSH3
DHFR
TMEM229B
NUF2
RBBP5
MTF2
RAB37
SLC1A7
YWHAQ
CBX1
RABGAP1L
GBA
MAPRE2
FAM227B
DTWD1
RPS7
DUSP6
DMAP1
ZFP30
SAMD4B
AURKAIP1
SF3A3
GPRC5C
ACYP2
SSBP1
PAXBP1
COX16
RBM33
JMJD1C
TBC1D19
MMACHC
CCDC163
SUMO3
SELENOH
RPS29
CCDC130
PRRT1B
DCP1A
FRA10AC1
TRIP4
PEX3
ADAT2
RPL27
HTR5A
COMMD2
MED23
TMEM242
RBBP9
FAAH
CEP85
TTC32
DNAJC25-GNG10
DNAJC25
DSTYK
NPAS4
LUC7L2
TMEM14C
FMC1-LUC7L2
FMC1
TTLL12
SUPT7L
SLC4A1AP
SLC24A1
INTS14
TATDN3
NSL1
ACTL8
CALD1
EIF2D
ZMPSTE24
INTS12
GSTCD
NME1-NME2
NME1
ZSCAN31
SLC33A1
CLTB
NDUFS7
CANT1
TACO1
KDM3A
TEX50
ZNF32
NOS3
STX18
LARP1
RPL37
POLR3B
CALCRL
LSG1
MNAT1
TEFM
REEP3
GTF2H2C_2
TMEM41A
DRG2
STC1
RPS14
GTF3C3
HMGB1
NEMF
TDP2
ACOT13
DNAJB12
UTP3
ZNF829
ZNF568
CCDC59
DHRS2
RTTN
PPIP5K2
GIN1
GTF2H4
ZNFX1
ALG10B
GTF2H2
STX16
ST6GALNAC6
PAFAH2
KDM1A
ATP5MC2
WDR11
SKP2
LMBRD2
TFPT
PRPF31
AP3S2
REXO4
ADAMTS13
SAR1B
INTS5
GTF2H2C
MROH7
VTA1
NMBR
USPL1
GABPB2
RAD54L2
MAMDC2
MOB4
MTR
DEK
DPY19L4
KANSL3
FER1L5
RERE
SLC25A51
ESR2
POLE4
STAT3
TEX46
NME4
WDR36
ATF7IP
MRPL44
NDUFB3
FAM126B
NCOA7
DISP1
ILF2
IPO4
PUM1
EIF3F
TOP3B
TOR1AIP2
TOR1AIP1
TTC26
POLR2J3
TRMT5
SLC38A6
SAMD4A
ZNF408
ARHGAP1
ZNF317
ENG
DCAF10
SLC44A1
CFAP298-TCP10L
CFAP298
MRPL40
HIRA
TIGD2
MITD1
MRPS31
TTI2
CDK5RAP1
CCDC97
PPP6R1
INO80C
RCAN1
EPRS1
RAB30
ZNF391
TMEM43
CHCHD4
MTIF2
HERPUD2
PARP15
SLTM
BAIAP2
SNAP47
JMJD4
CEP72
H4C8
MRPL21
IGHMBP2
RNF217
BNIP1
TSEN15
PSMF1
NR1H3
ACP2
MRPS18C
HELQ
COX7A2
POLR2J2
CCNC
TBL1X
RGPD2
RGPD1
THAP6
IL36A
OPA1
S100A9
YY1AP1
DAP3
CCDC150
SNRPB
TMEM79
SMG5
PPIG
BMS1
IL21R
NSA2
GFM2
SLC45A4
GLIPR1L2
C8orf37
MRPL48
SMG8
COPS7B
NSFL1C
ATR
NUDT9
ZNF841
C18orf21
NBPF1
IFT88
ZNF134
FAM133B
NUP54
MRPL1
BRF2
WDR74
PDCD6IP
GALK2
LRRC61
EIF1AD
BANF1
ANK1
USP30
XKR7
ZNF554
IQSEC3
ZNF383
C1orf167
AKAP10
AARS2
ADNP
ZNF292
ZNF772
SNIP1
DNALI1
FRG1
TRUB2
COQ4
PES1
MTBP
MRPL13
MTOR
CCDC88A
ATP1A1
MRPS23
GSTA4
FGF1
RNF187
EPB41
COPS4
SCMH1
ZSCAN25
N4BP2L2
SF3B6
FAM228B
KLHL20
HACL1
BTD
RUVBL1
ARID1A
TSFM
TTC23L
TUT1
GTPBP3
ANO8
PLEKHM3
GTF3C5
TTLL1
ZNF165
CDC73
SCNM1
LYSMD1
DUS1L
CEP85L
ZSCAN22
DDX18
TMED1
ALKBH3
CATIP
SLC35A3
LSM5
FBXO38
DHX16
NOP16
HIGD2A
SMU1
TMA16
NECAP2
FAM98B
COA6
RPL5
SNX17
EIF2B4
CLUL1
RBM45
TMEM222
TGFBR2
DRAP1
C11orf68
POLDIP3
RMND1
ARMT1
FAM160B1
ALG14
LRP6
WDR55
PUS10
PEX13
FGFBP3
CLTC
ZNF385A
VPS13B
AVL9
ZNF561
LOC102724265
PDE6D
ZSCAN30
CPPED1
ALG10
SCAND1
AFAP1L1
MACC1
PDE7B
SUGCT
MPLKIP
EIF3E
SMARCD2
SERPINB1
HSPE1-MOB4
HSPE1
HSPD1
ACTR3C
C17orf75
HEATR1
SNRPD1
R3HCC1
ZBTB45
PIH1D2
NKAPD1
SMIM13
DHTKD1
DPP9
C10orf88
DDX1
CCNI
CENPV
AQP10
SDHAF3
RNF125
GRPEL2
RNF6
ARID3B
POLR3E
ZNF670
SMG7
SREK1IP1
CWC27
TTC4
HDAC2
COPS2
RPS15
PRPF18
SEC13
ZNF501
GPAM
ISY1-RAB43
ISY1
NUP107
TMEM101
HAX1
TPK1
RPS3A
CEP120
TMEM259
CCR6
ITFG2
WBP1
INO80B
PTDSS2
SLC35E2A
ZMYND8
ATG4C
MRPS14
SLC35B1
CCSER2
PHIP
APRT
SOD2
CRKL
CLASP2
TARS3
MRPL3
MAN2C1
GNAL
DCLRE1B
AP4B1
SRRM3
HUS1
ABCB10
MED18
ANO9
PFKM
SNRPB2
METTL9
ZNF609
METTL8
DCAF17
MMEL1
CRH
MTHFD2L
HIP1
CCDC107
ABCG1
NFIB
AIG1
TPM3
CNN2
SESN1
CCAR2
C8orf58
TCTN3
FLT3LG
B4GALT7
ZNF518A
RPL7A
MED22
ARHGAP19
PRKAB1
SRP9
CREM
CCDC174
EEA1
AASDH
TIAM1
NOL12
ZNF546
NDUFS3
KBTBD4
SCGB1C2
CLUAP1
ZNRF4
CUL5
PRELID3B
FOXN1
DNAJC24
DCDC1
MAST4
ARMH3
IRF9
TPM4
PDGFD
ERCC6L2
NBN
CERS5
MLEC
LARS2
TSPAN10
NPLOC4
CHD1L
CCDC115
ORC4
MBD5
KRR1
PACSIN2
CASC3
ATP10D
CHMP7
NDUFA4
TPR
ODR4
ZBTB40
PIP4P2
DNAJC6
ELAVL3
UBOX5
FASTKD5
VIRMA
CASS4
SEC22B
RABGGTA
ARHGEF12
STOML2
CDIPT
RIF1
MEMO1
SMIM12
SEC23B
POLG
NDUFC2-KCTD14
NDUFC2
HLA-E
ZNF770
PLCL2
TMEM70
ELOC