ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

GTPBP6
MAPRE2
MTRNR2L8
ITGB3BP
EFCAB7
BSDC1
KCNJ15
GALNT1
SUPT7L
SLC4A1AP
AADACL4
ATF7IP
KDM3A
ZNF408
ARHGAP1
GABPB2
RCAN1
RPL27
C19orf18
COL4A5
COL4A6
MTRNR2L2
MSH3
DHFR
SF3A3
IRF6
LGALS3BP
COX16
TMEM79
SMG5
MMACHC
CCDC163
CDIPT
PPP6R1
KRBA1
COPS4
PRSS41
NDUFB3
FAM126B
PIH1D2
NKAPD1
RBBP5
EVPL
HDAC8
NME1-NME2
NME1
AURKAIP1
COX7A2
APOA1
PRPSAP1
INTS5
MTF2
RPS26
ARID1A
TUT1
LY6K
DNAJC16
CASP9
RABGAP1
ARTN
KDM5C
PLA2G2A
MED18
MAMDC2
EIF2S1
ATP6V1D
TBL1X
DUX4
RPS7
CLPTM1
CALCRL
SMG8
SLC33A1
ARHGAP39
TPM3
CCL20
STAT3
AHCYL1
PAXBP1
SELENOH
STC1
WBP1
INO80B
LIMK1
CCNI
RGPD2
RGPD1
SERPIND1
ITFG2
SLFN12
CDK12
HAX1
ZNF226
RFFL
TCTEX1D4
BTBD19
DHX16
AIFM1
BAIAP2
MAP3K14
DUSP6
ZNF571
ZNF540
WDR83OS
WDR83
GPC6
MAN2B1
KDM1A
TEX46
UBB
TNFRSF1B
RMND1
ARMT1
SSBP1
EIF3F
ZDHHC6
VTI1A
IGFL4
THG1L
GTPBP3
ANO8
ARMCX5-GPRASP2
ARMCX5
ELFN2
CELF1
PSMB7
ABRACL
RAG2
IFTAP
RBM33
GTF2H4
ZMPSTE24
UTP3
ISY1-RAB43
ISY1
STK40
CCDC174
CANT1
TIMP4
MTBP
MRPL13
LPIN1
PPIL3
NIF3L1
ARHGEF2
ILF2
BCL10
LRIG2
SNX27
RCAN2
COL18A1
RPH3AL
AKIRIN1
NOL12
ALG14
ZNF331
AP1G1
SLCO1A2
NID1
RNF125
REXO4
ADAMTS13
PACSIN2
UQCRC2
C1orf174
KAZN
MICALL1
GBA
COL23A1
YWHAQ
PLEKHG1
PPIP5K2
GIN1
TTC26
ZNF383
ZNF585B
TRIM5
PPRC1
TRIM22
RAD51AP1
C12orf4
ZW10
DUSP14
RPA2
IL17F
ZNF56
TTC39C
EIF5A
DNAJC25-GNG10
DNAJC25
ZNF790
TRUB2
COQ4
MRPS23
EFHD1
TFB1M
VTA1
NMBR
TMEM101
DNAJB12
DDX41
DLX4
PIKFYVE
ASAP3
FAM124B
TMEM247
FAAP20
ZBTB25
ZBTB1
CSNK1E
RHOD
ZNF165
CELA2A
NEMF
TRMO
YPEL3
TBX6
TMEM242
SLC25A53
THEM4
RPL38
FRRS1
RHOQ
ATP6V1E2
PRRT1B
MITD1
ARID3B
UFC1
TFPT
PRPF31
HAPLN2
LSG1
NCOA7
RNF207
ARMC1
RPL11
TBC1D19
SIN3B
BNIP1
TIMM10
MED11
SCARB1
B4GALT3
PDE12
TNPO3
UBE3B
IFI6
GTF3C3
MAST2
FAM89A
RABGAP1L
LRP6
HEATR1
PES1
STX1A
TM2D1
PARP15
PSMD3
KANSL3
FER1L5
TOMM40
C3AR1
CASP10
VPS52
RPS18
B3GALT4
NEK2
ECPAS
ZNF577
CD14
ZRANB2
ZNF688
CTSK
ADRA1A
SHOC2
BBIP1
BAHCC1
TEFM
BORCS6
SLC35B1
RPS24
POLR3A
HEMK1
C3orf18
RERE
RUVBL1
TNFRSF1A
PCNP
RAB30
RBM25
PLK3
PEX3
ADAT2
SCMH1
SNX17
EIF2B4
ATP5MC2
PTDSS2
ANO9
ZNF461
ADAT1
SULT1C2
KRT19
UFD1
CDC45
TTI2
DPP9
TIMM22
ZNF750
VPS35L
TRAFD1
S100A11
EIF3E
AASDH
AAAS
NOL8
CENPP
COIL
SLC39A9
ERH
GPATCH3
PAFAH2
PRDM1
SPHK2
RPL18
FAM83E
NR1H3
ACP2
SNRPB
CEP120
CLASP2
SMIM12
ZNF335
ZNF510
TAF12
NEURL4
IPO4
EPRS1
ZBTB45
LIG3
TTC14
ARMC7
HEBP2
TBC1D9
FAM184A
MTR
ZNF585A
DDX42
CCDC47
PHF5A
ACO2
CCNC
SNRPD1
CHMP7
TMCO3
DCUN1D2
PHC2
INKA2
DDX20
RCC2
TTLL2
SESN1
GADD45A
CEP57L1
ZXDC
DDX18
ANKRD13C
YJU2
FBXW7
ZNF221
AKR1A1
AMHR2
CCDC97
TRAPPC8
PIGL
NCOR1
MDM4
ISLR
CDK5RAP1
TMEM259
CNN2
GTF2B
PREPL
CAMKMT
PXT1
KCTD20
CMSS1
DMAP1
CCDC115
TIMM9
KIAA0586
TRPV2
OCIAD2
FAM222B
MROH7
GYPC
ALG10B
DHX8
PDSS2
FRA10AC1
POMGNT1
LURAP1
DYNLRB2
EFCAB14
JMJD1C
COMMD2
MAN1C1
CREM
ZNF484
SLITRK5
DAPK3
MTHFD1L
CLDN7
MRPS15
IPO13
DBF4B
NR1I2
ZNF793
GCNT7
FAM209A
MED23
CALD1
WSCD1
CNGA1
PPIH
USO1
FAF1
PDE10A
CLN3
APOBR
LRRFIP1
TTC32
POLR1H
ZNF260
ZBTB40
POLG
GMEB2
RBL1
ZNF2
ZSCAN4
SEC16B
NUF2
NBPF1
FDXACB1
C11orf1
SRSF1
KIAA0319
TUFT1
MTMR11
ATG4C
DNAJB4
KAT7
FUBP1
SLC1A3
CCDC59
ANKRD17
KDM8
BNIP5
MYO1B
MOB4
CPD
KDM6B
UQCRH
LRRC41
GLIPR1L2
SH2D5
SGMS2
TMEM128
GALM
MNAT1
DHRS2
BANP
KIF2C
SMARCD1
ERICH4
DMAC2
LYPLA2
CCNY
SF3B5
RPL26
TM9SF4
NFYC
CCDC107
ZNF806
C19orf48
INTS4
LIMA1
MRPL1
KRR1
MED16
PLCD3
ACBD4
CZIB
EIF3D
PSMB6
NYX
RTTN
INTS2
ZBED9
DNM2
LACTBL1
IRF9
C11orf49
PCBP2
CSTF2T
SCP2
NR1H2
ZNF302
SH2B1
AMD1
CDK19
RFXANK
BORCS8
STBD1
SF3A1
CCDC157
HIRIP3
RPL37A
SCT
CDHR5
OAZ3
MRPS33
GOSR1
PRRG2
NOSIP
MRPL9
CORO1C
PSMD9
HPD
F2RL1
CALCB
CCDC130
TTLL12
SNIP1
DNALI1
PDE7B
UIMC1
OSBPL8
ZNHIT3
SUGCT
MPLKIP
ARL14EP
RIMBP3C
RIMBP3B
ZBTB8OS
RBBP4
MVB12A
TIMM50
NRDE2
SREK1IP1
CWC27
MIDEAS
CDC5L
PHB2
PEAK1
HMG20A
TNFAIP1
IFT20
INSYN2B
USP54
CDH1
SUGP1
MAU2
CYB561D1
EMILIN1
POC1B-GALNT4
GALNT4
NME7
BLZF1
JUN
CHST4
RTL9
ASB5
NSA2
GFM2
CDK14
RSPH3
PRDM4
ZNF791
ZNF490
NCF4
ZNF613
ZBTB7B
WDPCP
MDH1
ZMYM6
USF1
TANC1
WDR55
CORO2A
PRKCI
WDR11
NOP16
HIGD2A
CRADD
MRPS18C
HELQ
BRF2
AAR2
SCYL3
UBQLN1
CYB5R2
MLX
COASY
SOD2
WTAP
AJUBA
INO80C
TMED1
SPRR2F
TYSND1
S100A13
KCNH4
HCRT
S100A1
SUMO3
WDR36
ZNF48
UTP11
WASF2
MYLPF
SEPTIN1
ZSCAN30
DCT
SLC39A6
MYO1H
RUFY3
NRL
CD2BP2
SLC35A4
APBB3
DCAF11
HAUS4
CES3
SLC25A44
TEF
ZNF518A
BORCS7
ZNF570
ZNF569
TMEM30A
FBXO46
AGTPBP1
CEP162
GDF6
ZNF572
IARS2
BPNT1
STARD10
CAND1
QRICH1
SIRT4
PTAFR
LMNA
TCIM
C8orf37
LSM5
AVL9
ATP5MC3
CYB5R4
UBQLN4
LAMTOR2
GPX1
LMNTD1
SCNM1
LYSMD1
RAB42
CNPY2
CPN2
SLC7A11
RCC1
MBNL2
TBX18
SEPHS2
NHLH1
TRMT1
NACC1
LTA4H
NEK4
MAP2K3
ASXL3
ADPRS
CCNT1
TEKT2
TMBIM1
STAT6
ZNF350
SNX12
KLF3
ACTR6
ABCD2
GLCE
TTC9B
MTRNR2L10
MRPL48
GABPA
ATP5PF
TBC1D22A
TPGS1
PSMD8
XPNPEP3
ST13
GABARAPL1
SRRM1
CASQ1
ARHGEF10L
UBE2F
TSFM
RIF1
CGGBP1
C3orf38
CALM2
TRIM25
MRPL54
APBA3
RC3H2
KIF20A
BRD8
SIRT3
PSMD13
PLAAT2
RAB33A
BEST4
CFAP298-TCP10L
CFAP298
NUP54
SLC35E2A
ZKSCAN2
GPN3
FAM216A
TRMT11
HBS1L
GOSR2
WDR5B
DOCK3
GNA12
CD24
TPK1
PSG9
RIN2
FNTB
HACD2
ETFBKMT
PLEKHG2
AP2M1
ZFP36
CRYAA2
CRYAA
PMF1-BGLAP
PMF1
FGD4
ATAD5
MRPL45
PRKCSH
CCDC151
RAI14
NHS
NECAP2
C16orf92
ZNF300
TAF15
PLPP5
NECAP1
PSME3
CSF3R
ENDOV
ZNF566
USHBP1
FAM13A
RPL22
ZNF573
MSANTD3
CHRNA9
DSTYK
ZSCAN22
DDX46
INPP5A
HAUS6
NTN1
RPS29
FOXO3B
TAOK3
ZFC3H1
THAP2
GCNT2
SLFN5
POLR2J3
SLC30A6
SLC35F2
ADGRL1
IGF2R
HROB
CTSB
RPAIN
NUP88
COPS7A
TTC39A
MZT1
BORA
HTR3A
MTUS1
PDXP
GORASP2
EIF4A2
TXNRD1
PLIN3
HEXIM1
KXD1
AP3S2
THOC2
TAF13
DNAJC11
LZTR1
MIS18BP1
UBR2
TIAM2
GP5
TMEM120B
FCRLA
C4orf51
EIF1AD
BANF1
GSTA4
GNAL
SRFBP1
ARHGAP24
AKR1D1
NOLC1
TRIM10
HAAO
TMEM208
LRRC29
CUL2
C2CD5
SLC4A8
TXN2
DYNC1I2
TBCB
GALNT6
SNU13
POLR2I
OVOL3
CACTIN
AARSD1
RUFY4
C6orf118
TUSC3
SULT2A1
RNASET2
TATDN3
NSL1
ZNF391
RWDD1
ARID2
PLS1
CASP3
TXNDC17
KIAA0753
NXT2
CHKA
DRG2
TTC5
GTF3C5
SFSWAP
MAD2L1BP
GTPBP2
SLC35E4
SRP54
SLC35A1
CREBL2
C1orf100
POGLUT3
TTC31
CCDC142
CUL3
FUCA1
RASL10B
CDRT1
ADAMTS16
ZFP30
SMG7
IRF2BP2
SLC18B1
SH3BP5
CLK4
MEGF8
NOL11
CCNG2
UTP25
SIAH1
THOC5
PUS10
PEX13
ABR
YARS2
ACBD5
CLCN3
DNAL1
RTCB
YLPM1
DYNC2I2
RBM8A
ELSPBP1
BSPH1
NIP7
COG8
SRSF4
KCNE2
NOCT
TIPRL
PIP4P1
TBC1D1
PHF12
KLHL34
SSR2
AQP12B
LUC7L2
FMC1-LUC7L2
FMC1
TES
RPS12
PNISR
RRBP1
RPS27A
CLHC1
INHA
OBSL1
TRMT112
PRDX5
MAPK13
NPAS4
CCDC90B
CMPK1
MPDU1
LOC100996842
CD68
MAP3K7
SULT1C4
LTBR
POC5
NTPCR
CD320
PYGB
SCNN1A
SNRPG
SPAAR
CEP85L
U2SURP
BCL2L13
ATP2C1
DEDD
DCAF8
SPIDR
CACYBP
DGKD
TSPAN3
ARHGAP9
SLC35D1
MARS1
GPRC5A
HMGB1
USPL1
GALK2
COPS2
RPS3A
TAS1R1
NOL9
CHPF2
THRAP3
AMPD3
ABCF2
LRP10
CHID1
IAPP
PRSS23
MTOR
SF3B6
FAM228B
UBOX5
FASTKD5
ORAI3
MXI1
AFTPH
ZNF180
ERAL1
NSUN3
DHFR2
ELAC2
ZNF416
GTSE1
ZIK1
PIK3CB
FIG4
AK9
ARSF
DHRS13
OSGEPL1
ZNF286A
ZNF20
CLASP1