ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX391683 | CD34 Hematopoietic stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◣ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

HTR5A
RAB37
GTF3C3
PDE11A
DMAP1
NUF2
C3orf14
OR4K17
FRA10AC1
INTS12
GSTCD
IQSEC3
TBC1D19
HTR4
KCNH1
SPX
MED23
TOP3B
XKR7
KCNJ15
SKP2
LMBRD2
SRRM3
MRPL44
EIF2D
GCNT7
FAM209A
APOA1
ANK1
RAD54L2
PPIAL4F
PPIAL4E
PPIAL4D
RBBP9
FOXN1
COX16
S100A9
PUM1
CASS4
EXTL2
NPAS4
AADACL4
P2RY4
CPLX2
KIAA1549
MRPS31
MRPL21
IGHMBP2
BSDC1
RBBP5
USP30
HES3
RPS7
PLEKHM3
DCAF10
FGF1
TMEM242
TRIP4
MTF2
PEX3
ADAT2
ALG10B
GDPGP1
CIB1
STAC
ELOVL2
SELENOH
ADCY10
SAR1B
SEC13
RABGAP1
SULT1C3
MNAT1
BNIP1
SMIM17
SNCG
MMRN2
COMMD2
AURKAIP1
NCKAP1L
DRG2
R3HCC1
GLRA1
RPL37
IPO4
FAM98B
YWHAQ
TSEN15
CDK5RAP1
DEGS2
GPRC5C
DUS1L
TPD52L1
TGFBR2
GTF2H2C_2
GTF2H2
DLC1
TACO1
TCF7L2
CEP72
DPY19L4
DCP1A
TTC4
M1AP
GTF2H2C
XKR4
PIP4P2
PERM1
NEMF
N4BP2L2
CHGB
TMEM222
VSTM1
ZNF391
CRH
CTAG1B
CTAG1A
CUL5
CBX1
PRSS22
POLR3B
LRRC61
ACTR3C
SLC37A2
LSG1
NSA2
GFM2
RABEP1
TTC32
STX18
METTL15
KIF18A
SNAP25
ATR
FAM24A
SLC24A1
INTS14
VTA1
NMBR
SAMD4A
CCDC130
FAM227B
DTWD1
YAP1
GSTM5
DNAJC6
CAMK1D
ACSL6
TEFM
SSBP1
NEGR1
RPL27
ALKBH3
RRN3
PRELID3B
COPS7B
PDE6D
OPA1
FAM160B1
STEAP1B
SMU1
ZNF770
CASC3
SDR42E1
SERPINB1
SLC44A1
PVRIG
PXK
C17orf75
SPAAR
HRCT1
SFT2D3
SCGN
MRPL39
GBA
GDPD5
FEM1C
BAAT
HMGB1
USPL1
TSFM
SCCPDH
SNAP47
JMJD4
TMEM229B
VPS13D
CPNE4
SLTM
FBXO38
PRPF18
SIGLEC10
OPRM1
ADRM1
PPP6C
ZNF117
NMNAT1
LZIC
PAFAH2
CCDC88A
CLK4
KLF14
KANSL3
FER1L5
ALG10
SLC8A1
NDUFS7
RHOT2
PRR23D2
PRR23D1
KSR1
ZMPSTE24
PDE1C
TPM1
TDP2
ACOT13
MRPL3
RPS20
THSD7A
POLE4
FSIP2
ACOX3
TRMT44
AKAIN1
PPP1R3C
EPS8
RTTN
STX16
INSM2
ITGB3BP
EFCAB7
SMCO1
SLC25A51
TMCC3
TMEM41A
SLITRK1
PSMF1
NR1H3
ACP2
DSTYK
B4GALT7
GNAL
LARS2
BMS1
CALB1
ANGEL1
SCG3
JMJD1C
REEP3
RPS14
CTNNB1
CCDC97
FRG1
ST6GALNAC6
R3HDM2
GRIA2
TRMT5
SLC38A6
CAMK2G
EEA1
DNAJC24
DCDC1
RABGGTA
NTSR2
GPR78
NME1-NME2
NME1
CSGALNACT1
VWA8
TMEM89
RPS29
PDHB
RMDN2
EIF3E
RFC1
GLIPR1L1
CAPS2
MMP7
PIN4
NOXA1
ERCC6L2
CLVS1
METTL9
NXPH3
NUP54
DRAP1
C11orf68
SF3A3
PPIP5K2
GIN1
MEX3C
C2orf88
MAN2C1
VMO1
GLTPD2
COQ2
DNAJC25-GNG10
DNAJC25
AP3S2
MED4
HNRNPA1L2
HERPUD2
KLRD1
SAMD4B
RAP2C
IRAK2
ATP10D
INO80C
ITGA4
MTMR6
FAM184A
MRPL40
HIRA
PPIAL4H
SUGT1
UTS2B
CCDC50
GTF2A1L
CPA6
GINS1
DERA
GGACT
BAIAP2
OR1E3
SREK1IP1
CWC27
ZFPM2
ADAMTS7
HUS1
PSRC1
SYTL4
WDFY1
AAR2
APOBEC3B
NPIPB9
DUSP6
PRUNE2
LEP
APOL4
TMX2
MED19
MARCHF4
TTC26
TMED1
CRP
DLGAP4
C11orf49
EXOC2
NECAP2
MNDA
STOML2
SCNM1
LYSMD1
HSD17B6
PPM1H
NOTCH2NLC
UBE2F
RTP3
DDX18
ZNF579
DISC1
ZNF296
GEMIN7
ACAA2
ASF1A
YBEY
MCM3AP
OAZ3
TMEM68
TGS1
DGKZ
TMEM62
FAM207A
NOTCH2NLA
MOB4
SMIM13
FGFBP3
ZNF761
SLC35G5
HRH4
WDR36
PPP1R14C
CTHRC1
RNF6
NCOA7
LAMTOR1
PDCD6IP
NDUFC2-KCTD14
NDUFC2
EIF5A2
EDN1
TXNRD2
ADNP
TSPAN10
NPLOC4
NDUFA4
CPEB4
ATXN7L2
ITGA7
ANKRD46
NMNAT2
YJU2
RUVBL1
SYN3
TRDMT1
SNRPB
HOXC6
HOXC5
TFPT
PRPF31
ALDH3A1
POLR1F
NEUROD1
DDX1
FUT10
MRPS14
PLEC
CLDN4
ANKRD40
AQP2
RPL7A
MED22
SURF2
SURF1
CDKN2AIPNL
BZW2
ANKMY2
FAM133B
SESN1
CEP57L1
DHX32
SNX19
AGK
SECISBP2L
CA2
CTRL
ZNF829
ZNF568
MITD1
GLIPR1L2
PHF21A
FAM221A
TVP23B
C12orf73
GPT2
IL4R
TNFAIP8L1
POLR3E
PLCL2
ZNF212
RARG
EIF2B3
ZFP30
MAPK1IP1L
TRAM1
TATDN2
LUC7L2
FMC1-LUC7L2
FMC1
NMRAL1
HMOX2
HPSE2
TOR1AIP2
TOR1AIP1
NBEA
MAB21L1
WDR11
PDE4C
TYSND1
COLEC11
KDM3B
PDE7B
NOTCH2NLB
OTUD7A
ACSF3
SCAMP2
THEM4
SLC35A3
RPL5
ZNF783
DPH2
STK19
DXO
TMEM202
DGKQ
L1CAM
KLHL20
GARS1
GTDC1
SLC41A3
ZBTB40
NNT
PPIAL4A
TBCK
AIMP1
SAAL1
DHRS7
TEX9
RFX7
A2M
STAT3
KNL1
CXCL2
LGR5
ANKRD18B
GPD1L
SLC38A9
VIRMA
NCBP3
MRPL58
ABR
ARL8B
AARS2
CENPV
NPIPB6
BIN2
GASK1A
PPP2R5B
TMEM255A
OR6J1
PRMT3
LCP2
SNRK
MRPL16
KCTD6
ZNF426
PET117
KAT14
BTG3
PCSK1
TTLL12
DLGAP3
POMP
SLC1A7
EPHA3
ATP5MC2
SNAPC3
MRPL22
GEMIN5
TOMM20L
TAMM41
LIPA
ACOT2
NBN
TAB1
TPM3
NXPE3
FOXN3
BTN3A2
GJB2
CDC73
ZSCAN12
ANKAR
PSEN1
MRPS18C
HELQ
ZNF501
CRBN
PLCD3
ACBD4
ZER1
GOT2
TINF2
POLM
CCDC59
CBWD1
ZNF324B
CEP85
PRDX3
FAM25E
TMEM60
PHTF2
ZNF609
TRAF6
RAG1
MSMO1
EIF1AD
BANF1
KMT2D
NPFF
SMAD5
EEFSEC
CYP17A1
THOC5
STXBP3
NKX1-1
PRSS38
ZNF114
SCAF11
GPR3
C10orf88
PNPLA7
TANGO2
MTPN
LUZP6
SVOP
CCDC92B
MTIF2
PTPRCAP
RPL11
SNRPB2
COL9A2
CCNF
PTPN21
MAOA
UTP3
C8orf37
LIN28A
CBWD5
CBWD3
WDR24
SERHL2
MTA1
ISM1
CACNA1G
INTS5
WDR41
COL18A1
FOXJ3
CD47
AGO1
TDRD7
ZFP41
COMMD4
PFN3
TMTC2
LGALS2
CXCL3
TOX2
RHBG
ILF2
SORBS1
CDH5
PSMA3
TIGD2
BRF2
TMEM70
ELOC
PRMT5
VANGL2
CNOT3
SDHAF3
EPS15
LSM5
AVL9
NFAT5
ARAP1
COA6
SPEF2
RPS15
MS4A12
ANKRD34C
CFAP298-TCP10L
CFAP298
RNASE10
CHCHD6
NME4
MTERF1
C1GALT1C1L
ZNF280D
VPS72
SPDYA
SLC7A6
ZNF148
BCR
C17orf50
CALCB
CBWD6
CLEC12A
OR8B3
BMP1
SFTPC
VAMP4
NDUFAF5
ESF1
GRAMD4
SNX1
CIAO2A
ZC3HC1
SLC35B1
SYNPO2
SPATA20
WSB2
CEP164
C20orf194
GSTA4
OMP
ROBO3
FIS1
ZPBP
SPATA48
NOC3L
PSTPIP1
SRP9
GDAP1
C7orf26
STEAP2
ARRDC2
SCN9A
MON2
RBM45
ARMH3
MLEC
SLCO4C1
OR1E2
DUSP16
SMAP2
EIF3F
HIP1
RBIS
ING3
F8A3
F8A2
F8A1
H2AB3
H2AB2
H2AB1
AIG1
CCDC150
RANBP1
TRMT2A
PPA2
STAU1
DDX27
IQCF2
NDUFS3
KBTBD4
TBPL1
ZNF385A
COMMD1
RAD52
RPTOR
ABL1
CFHR4
MBOAT4
USHBP1
TUBGCP3
RAPGEF1
SLC38A2
KMT2A
LRTM2
NDUFAF1
BACH2
ADD2
ERBB3
CCAR2
C8orf58
CRLF3
JRK
ATP6V1B2
YPEL3
RARS1
PCID2
CUL4A
MPPED2
GTF3C5
TMBIM6
EDC4
BBS1
TIGD1
EIF4E2
GNG2
UBE2L6
ZNF292
SMARCD1
WDR47
WDR55
NLE1
GPAM
CHD1L
PRKAB2
CYB5A
NOTCH2
ITGAL
SST
TPH2
SPARCL1
VWA3B
TIA1
CNTNAP5
NFE2L3
UBLCP1
VPS4A
TMPRSS12
MAGOH
ATP1A1
PHIP
CD274
TMIE
MAPK8IP2
ALS2CL
SLC39A13
RNF103-CHMP3
RMND5A
TATDN3
NSL1
VN1R4
CLTC
ADARB1
HS3ST2
NFE2L2
TAAR9
HYOU1
CSDE1
SEMA3D
ZNF138
EMID1
SLC45A4
PSMD6
NRF1
LRRD1
SF3B6
FAM228B
UCHL3
COMMD6
TRIM16L
GEM
RIPOR2
SLC27A5
TMA16
MIER3
OR4K3
WARS2
RAB24
PRELID1
AGBL2
KDR
SMIM8
SYP
RARA
MRPL48
RTN1
P2RY6
GRM1
FBXL12
ACTA1
TUT7
TXLNB
AKAP13
ELP1
ABITRAM
TRAPPC5
MCEMP1
FGFRL1
MTBP
MRPL13
CHRFAM7A
GPR62
NINJ1
NLRP1
CEP85L
SEC22B
SLC39A3
SNX17
EIF2B4
KRAS
CYP20A1
SEM1
KCNK12
B4GALNT1
EPHA10
CHRM4
ATP5MC3
METAP1
SCNN1G
GATAD1
MFAP3L
ZFP62
MYOCD
GPBAR1
RETSAT
TLR2
FASTKD1
MAF1
WDR97
PIK3R1
TMEM79
SMG5
PTCD1
CPSF4
TRMU
CACNB3
INPP1
CPPED1
CCDC115
HTRA2
DQX1
CBWD2
RBMS3
CPE
LMLN2
TTLL4
DTD1
KDM1A
TEX46
TTC5
PNPO
ALDH9A1
GCNT3
CCNC
NSFL1C
KDSR
ACYP2
LIG3
MTR
BARHL1
TBC1D13
TTC37
ARSK
HNRNPH1
GAS2L1
ZNF562
STMP1
PKIB
LRRC10B
CTAGE8
CTAGE4
PCP4L1
ZNF518A
U2SURP
OGT
REM1
DEFB124
KAT6A
PDCD2
SLC33A1
CLUL1
KIF21A
ANXA3
TRMT61B
MEGF8
LIG4
ABHD13
CSRNP1
GRAMD1C
TEX50
REXO4
ADAMTS13
DEK
RPP14
HTD2
F8
SATB1
MACC1
CA14
OTUD7B
RPL38
HPCA
TPK1
DPYD
PSMG3
THAP6
POLR2C
PPIAL4C
IL12A
HIF1AN
HLA-DRB5
TEX261
DNAJB12
RIF1
COL26A1
UNC80
CHSY3
SEZ6L
STAT6
SHF
ABRAXAS2
POU4F2
PRKG2
FAR1
SFRP4
EPDR1
ZNF827
ZFYVE9
IQGAP2
CLASP2
TPM4
DPP8
HEATR4
CNOT11
CENPVL3
TMEM14C
QDPR
CLRN2
GPR37
FAM118A
METTL8
DCAF17
PLK1
FAM76B
CEP57
GRIN2D
KDELR1
ZZZ3
TFAM
TMEM101
GCFC2
PRSS27
TBC1D10A
SETD1A
MC5R