ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MSH3
DHFR
KCNJ15
MTRNR2L8
MTRNR2L1
KRBA1
CLDN18
PAXBP1
RAB37
RGPD2
RGPD1
SMCO1
OR4K17
H4C8
LCE3A
LCE3B
TSC22D3
GBA
TTLL1
RAPH1
MMEL1
TMEM89
BSDC1
HTR5A
SNAP47
JMJD4
ILF2
TINAGL1
APOA1
NDUFS7
ZMYM3
ZNF317
UBC
DCP1A
C19orf18
RBBP5
LOC102724265
FBXO31
ZNF761
MATK
COX16
TDP2
ACOT13
TRIM9
ST20-MTHFS
FUT8
DEFA6
B4GALT7
CASC3
EPS8
FAM184A
TMEM259
TOP3B
NGB
TEX38
ATPAF1
EIF2D
ZNF76
TBC1D19
RD3L
ATP5MC2
RAB5IF
STK39
FAM227B
DTWD1
NPAS4
FRG2
SLC44A1
USP30
DRAP1
C11orf68
SUB1
AURKAIP1
RAD54L2
TMEM43
CHCHD4
BLK
TNFRSF13B
HSD17B6
TPM1
GCNT7
FAM209A
WDR11
DEGS2
CCDC130
DDX1
COMTD1
OR4X2
RERE
KRTAP9-6
COL23A1
COMMD2
TACO1
RPS14
S1PR4
DMAP1
JAK1
ITGB3BP
EFCAB7
SLC33A1
NCOA7
ZCCHC4
CCDC88B
BARHL1
CXCR2
NUF2
WWOX
RAB11FIP1
MRPL38
KATNBL1
S100P
WDFY1
TOR1A
CORIN
SAMD4B
KNL1
POLN
HAUS3
NCBP3
ANAPC1
DPH6
METTL15
KIF18A
HMGB1
USPL1
PDE7B
ZNF670
PRSS38
RGPD8
RGPD5
RGPD6
IQSEC3
FSIP2
MZT2A
LEP
ATP1A1
MTNR1B
TATDN3
NSL1
RHEX
ANKRD20A1
RRP15
NDUFS2
ADAMTS4
FETUB
RPS29
SNX19
BCR
GPD1L
PPP6R1
TSPAN10
NPLOC4
SYT3
IGFALS
ZFP30
ACYP2
FAM98B
FAM25E
NEUROD4
PIGW
MYO19
MRPL28
C2orf88
DSTYK
CIZ1
DNM1
CDHR1
STX18
IPO4
TTYH1
DUX4
MTF2
CALM1
TOR1AIP2
TOR1AIP1
MRPL21
IGHMBP2
ZPBP2
IKZF3
FAF1
MAP3K7CL
RTTN
ARSD
DUS1L
PRSS22
SCRT2
SLC24A1
INTS14
CRH
FOXN1
GNG13
TMEM229B
STRBP
TRIP4
RAG2
IFTAP
FAM174B
CLEC19A
AP3S2
IRAK2
SMIM17
COPS4
COG2
SPTBN4
ZFP37
BLVRB
CALCB
CLTB
DRG2
CDC73
RPS6KB2
SF3A3
TTLL12
RNF217
GNAL
PLK1
PCYT1A
SCARF1
RILP
IAPP
RPS7
TEFM
CCDC92B
SCIMP
NAB2
TRAM1
GRM4
PDE8A
ALG10B
NUP107
CNTNAP4
MKRN2OS
MKRN2
CFHR4
ZER1
CXCL8
KRTDAP
SLC38A10
FRA10AC1
OR2AP1
GPAM
ISM1
LHX6
KCNH7
UBE2F
TLE5
EPRS1
NUDT15
MRPS31
POLE4
PSMD9
HPD
PCDH1
SELENOH
GPX3
CYP17A1
UTP3
ELAVL3
FGD4
CSRP1
HARS2
HARS1
KLHL12
WASHC3
TMED1
POLG
PARP2
CACNG4
RHOT2
RAF1
NCOA3
OR10A3
SHTN1
NSFL1C
PARP15
GSTM5
SLC25A51
DPP9
CCDC115
USP2
RABGAP1
UIMC1
CERS3
RPL22L1
CAPN2
ATAD2B
CCDC107
ZNF527
CEBPA
ABLIM1
HIBADH
AARS2
COL6A1
TRIM52
RABGGTA
TFAP4
SNX18
PNPLA6
PRKAR2A
NUAK2
THG1L
SYK
HECTD2
CLUAP1
C16orf90
TMC7
KRTAP10-12
GINS1
SLF1
KIAA0825
LIMCH1
ADRM1
STX6
TYW3
CRYZ
CFAP73
NINJ1
THEM4
FRG2C
AADACL4
YPEL3
FAM153B
SNCG
MMRN2
PDE11A
GTPBP6
ANP32D
TATDN2
TBX6
GORASP2
EXTL2
SULT1C3
FEM1C
MBOAT4
TLR2
LMLN2
APOBEC3B
BCAR3
ZNF572
ZNF324B
ZNF117
BAAT
CNOT3
ADCY10
SARS2
MRPS12
COL18A1
ZNF562
RBPJ
TXNRD2
SCCPDH
SLC1A7
CTAG1B
CTAG1A
YWHAQ
CBX1
RABGAP1L
NARF
APOL4
CAT
MAPRE2
ARHGAP39
ACAA2
DUSP6
MON2
C1GALT1C1L
SLC27A5
GPRC5C
ZNF623
CYBC1
TMEM62
SSBP1
SUPT6H
SDF2
SDR42E1
RFC1
SMIM31
DBNDD2
RBM33
JMJD1C
PDCD7
MAD1L1
MMACHC
CCDC163
SUMO3
GALNT1
PNPLA7
PRRT1B
FASTKD1
SLC2A7
SATB1
C16orf54
PEX3
ADAT2
RPL27
RPL11
REM1
DEFB124
TMX2
MED19
SEM1
NFE2L3
MED23
TMEM242
RBBP9
FAAH
ZNF577
C3orf14
CEP85
TTC32
DNAJC25-GNG10
DNAJC25
MSRA
ACOX3
LUC7L2
TMEM14C
RNASET2
FMC1-LUC7L2
FMC1
OAZ3
SUPT7L
SLC4A1AP
THOC5
ACTL8
EFCAB10
TRMT44
CALD1
LSS
ZNF566
SLC38A9
PIN4
ZMPSTE24
YJU2
INTS12
GSTCD
NME1-NME2
NME1
ZSCAN31
CANT1
KDM3A
TEX50
ZNF32
NOS3
TMEM44
COLEC11
LARP1
RPL37
POLR3B
CALCRL
LSG1
CADM2
MNAT1
REEP3
GTF2H2C_2
DUSP16
FABP6
ATP9B
DLAT
TMEM41A
STC1
GTF3C3
RMDN2
NEMF
CASP10
DNAJB12
ADI1
ZNF829
ZNF568
CCDC59
RTCA
DHRS2
SERHL2
SRSF7
ACSM2B
PPIP5K2
GIN1
GTF2H4
ZNFX1
GTF2H2
STX16
ST6GALNAC6
PAFAH2
KDM1A
TMBIM4
CASP4
SKP2
LMBRD2
TFPT
PRPF31
PIK3R1
REXO4
ADAMTS13
SAR1B
INTS5
GTF2H2C
MROH7
TFPI
VTA1
NMBR
GTF2A1L
ZNF792
TMEM68
TGS1
GABPB2
PSEN1
MAMDC2
MOB4
MTR
PRDX3
DEK
CLEC12A
DPY19L4
KANSL3
FER1L5
CD14
ESR2
STAT3
TEX46
NME4
WDR36
CLK4
ATF7IP
MRPL44
NDUFB3
FAM126B
GCNT1
DISP1
LCN8
INPP5F
PUM1
BANP
EIF3F
TBCK
AIMP1
VN1R4
TTC26
KMT2A
POLR2J3
TRMT5
SLC38A6
SAMD4A
KIF2C
ZNF408
ARHGAP1
STK19
DXO
ENG
FGD3
DCAF10
PPP1R3B
TULP4
SPAAR
CFAP298-TCP10L
CFAP298
MRPL40
HIRA
TIGD2
MITD1
TTI2
CDK5RAP1
CCDC97
INO80C
RCAN1
RAB30
ZNF391
KLHL41
CLDN4
MTIF2
HERPUD2
SLTM
BAIAP2
LMBR1L
OR8B3
TAAR9
CEP72
CDYL
ARRDC2
OR1E3
ZNF426
BNIP1
TSEN15
SLC35G5
PSMF1
SLC41A3
NR1H3
ACP2
TMEM202
MRPS18C
HELQ
COX7A2
POLR2J2
CCNC
TBL1X
THAP6
IL36A
OPA1
S100A9
YY1AP1
DAP3
CCDC150
SNRPB
TMEM79
SMG5
PPIG
LBR
BMS1
DNAJB13
IL21R
NSA2
GFM2
SLC45A4
PRKAG2
GLIPR1L2
C8orf37
MRPL48
UBE4B
SMG8
COPS7B
ATR
NUDT9
SCGB1C1
RTP3
LRIG2
USHBP1
ZNF841
C18orf21
NBPF1
REN
IFT88
H4C11
ZNF134
FAM133B
NUP54
KLRD1
MRPL1
BRF2
WDR74
PDCD6IP
GALK2
LRRC61
H4C12
EIF1AD
BANF1
CCDC83
CELF2
EML2
ANK1
SEL1L
DGKQ
IQCF2
XKR7
PRIM2
OPRL1
LKAAEAR1
ZNF554
CD200R1L
IQGAP2
ZNF383
C1orf167
AKAP10
ADNP
ZNF292
ZNF772
TTC5
SNIP1
DNALI1
FRG1
TRUB2
COQ4
AUH
PES1
MTBP
MRPL13
MTOR
CCDC88A
MS4A1
CYP4X1
TMOD1
MRPS23
GSTA4
FGF1
RNF187
RAB6D
EPB41
SCMH1
IL36RN
IL36B
ZSCAN25
N4BP2L2
SF3B6
FAM228B
SGCE
PEG10
KLHL20
HACL1
BTD
RUVBL1
ARID1A
OR6J1
COX8C
PRSS41
ZNF280D
TSFM
HYOU1
TTC23L
TUT1
FANCI
ANXA3
GTPBP3
ANO8
PDRG1
PLEKHM3
GTF3C5
ZNF165
IAH1
SCNM1
LYSMD1
CEP85L
ZSCAN22
PHB
DDX18
ZNF582
GLO1
ALKBH3
CATIP
SLC35A3
GAS2L3
LSM5
NAT8
FBXO38
DHX16
NOP16
HIGD2A
ALDH7A1
SMU1
TMA16
NECAP2
COA6
RPL5
SNX17
EIF2B4
CLUL1
RBM45
TMEM222
TGFBR2
SH3BP5L
POLDIP3
RMND1
ARMT1
FAM160B1
ALG14
LRP6
ASPSCR1
WDR55
PUS10
PEX13
FGFBP3
CLTC
ZNF385A
VPS13B
AVL9
ZNF561
PDE6D
ZSCAN30
CPPED1
ALG10
SCAND1
AFAP1L1
MACC1
MRAP2
SUGCT
MPLKIP
EIF3E
SMARCD2
SERPINB1
HSPE1-MOB4
HSPE1
HSPD1
ACTR3C
HEATR4
LRTM2
C17orf75
HEATR1
SNRPD1
THOC2
R3HCC1
ZBTB45
PIH1D2
NKAPD1
SMIM13
DHTKD1
CD248
C10orf88
ERBB3
CCNI
PRKAR1A
CENPV
ZNF677
VN1R2
AQP10
SDHAF3
C5orf34
RNF125
HYAL1
GRPEL2
FBXL12
CTAGE8
CTAGE4
RNF6
GASK1A
ARID3B
POLR3E
SMG7
SREK1IP1
CWC27
TTC4
HDAC2
COPS2
RPS15
PRPF18
SEC13
ZNF501
ISY1-RAB43
ISY1
TMEM101
LGR5
HAX1
TPK1
RPS3A
CRYAA2
CRYAA
CEP120
SPARCL1
CCDC149
CCR6
ITFG2
WBP1
INO80B
PTDSS2
SLC35E2A
ZMYND8
ATG4C
MRPS14
SLC35B1
CCSER2
ABCC10
PHIP
APRT
SOD2
CRKL
CLASP2
TTC38
PKDREJ
TARS3
MRPL3
MAN2C1
DCLRE1B
AP4B1
SRRM3
HUS1
ABCB10
MED18
ANO9
PFKM
SNRPB2
METTL9
ZNF609
METTL8
DCAF17
PCP4L1
MTHFD2L
HIP1
ABCG1
NFIB
AIG1
TPM3
CNN2
ERICH3
SESN1
CCAR2
C8orf58
TCTN3
FLT3LG
NRBP2
ZNF518A
RPL7A
MED22
ARHGAP19
PRKAB1
SRP9
CREM
CCDC174
EEA1
AASDH
TIAM1
NOL12
ZNF512B
CCNY
ZNF546
SLC35G3
NDUFS3
KBTBD4
SCGB1C2
PTGES2
ZNRF4
CUL5
PRELID3B
DNAJC24
DCDC1
MAST4
ARMH3
IRF9
TPM4
PDGFD
ERCC6L2
ZFP42
NBN
CERS5
SYN3
MLEC
LARS2
CHD1L
ORC4
MBD5
KRR1
PACSIN2
CTAGE9
ATP10D
PHC2
LIPA
CHMP7
ZNF699
NDUFA4
TPR
ODR4
MRTFA
ZBTB40
PIP4P2
DNAJC6
UBOX5
FASTKD5
VIRMA
PLSCR4
B4GALNT2
CASS4
SEC22B
ARHGEF12
STOML2
CDIPT
RIF1
MEMO1
SMIM12
SEC23B
NDUFC2-KCTD14
NDUFC2
HLA-E
ZNF770
PLCL2
TMEM70
ELOC
MAPK1IP1L
TIGD1
RPS26
EIF4E2
ZNF441
LPIN1
FAM13A
TMEM132A
RPS20
RNASE10
MSL2
GADD45A
SIVA1
NMNAT1
LZIC
MRPS33
GARS1
FAM13B
TMBIM6
GATAD1
FAM234A
POLM
DCT
TRAF6
RAG1
MPHOSPH8
ATP5MC3
ZNF571
ZNF557
ZNF540
ABCA3
PSMD3
ZMYM5
CEP57L1
TMEM107
KSR1
CGGBP1
NNT
CBWD5