ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945293 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◣ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
FRG2C
KCNJ15
SNCG
MMRN2
DUX4
THEM4
CNOT3
TATDN2
AADACL4
ST20-MTHFS
IRAK2
FRG2
LMLN2
SULT1C3
FAAH
TMEM89
YPEL3
BCAR3
TMEM14C
LEP
GCNT7
FAM209A
SARS2
MRPS12
CFHR4
PDE11A
OR4K17
RBPJ
CALD1
ACSM2B
ACAA2
COL23A1
CALCB
AKAP10
ACYP2
ZNF562
BAAT
TMEM229B
FAM184A
SUPT6H
SDF2
GSTM5
LSS
GPR82
ZNFX1
MON2
FEM1C
SLC27A5
ANP32D
CASP4
FAM227B
DTWD1
TXNRD2
CYP17A1
CD200R1L
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UGT1A3
CERS5
EXTL2
CADM2
CEP85
EFCAB10
APOL4
UBE2F
SMCO1
IFT88
ESR2
ATP9B
C2orf88
SCCPDH
DPH2
CASP10
SMIM31
NARF
CYBC1
PUS1
GAS2L3
ACSM2A
TLR2
SATB1
TNFRSF6B
FABP6
ADI1
NOS3
DGKQ
MBOAT4
ZNF117
ZNF841
GCNT1
RTCA
GTF2A1L
TMX2
MED19
ZNF792
CYP4X1
SPRR2F
RFC1
NUDT9
C1GALT1C1L
EHD2
PNPLA7
TMEM62
GTF3C5
BCR
CATIP
ZNF557
FASTKD1
COLEC11
TEX50
DUSP16
GPD1L
POLR2J2
ZNF280D
ZNF561
ACOX3
TRMT44
PTGES2
OR2AP1
ITGB3BP
EFCAB7
PRSS38
SERHL2
IGFALS
ZNF583
USP17L20
USP17L22
FBXO31
BCKDK
SEM1
PLEKHA5
C3orf14
GLO1
TCF4
ZNF324B
NXPE2
PDCD7
ORC4
MBD5
SDR42E1
ZNF134
ANXA3
HEATR4
THAP11
NUTF2
CENPT
CPA1
EIF1
GORASP2
SEL1L
PHB
SRD5A3
SYN3
NSUN7
COX8C
MPHOSPH8
HSD17B4
NANOGP8
ADCY10
ZNF761
TAAR9
TMEM202
MRPS36
PIGZ
KRT82
PIK3R1
TFPI
SET
PDGFRL
RPL11
REXO4
ADAMTS13
OR8B3
CTAG1B
CTAG1A
DUSP6
NFE2L3
SLC35G3
KIF2C
INPP5F
OTUD7A
CCDC83
N4BP2L2
OPRL1
LKAAEAR1
KRTAP10-8
THOC5
EML2
SLC38A9
SCGB1C1
TULP4
RTP3
EIF4E
OR1E3
FGFBP3
OR6A2
SLC2A7
PIN4
PTCH1
ELAVL3
KLRD1
LCN8
RAB29
ZNF577
BSDC1
GTPBP6
MTRNR2L8
KRBA1
RABGAP1
APOA1
TBX6
MTRNR2L2
DEGS2
MSH3
DHFR
APOBEC3B
ZNF572
NUF2
COL18A1
RBBP5
MTF2
RAB37
C19orf18
SLC1A7
YWHAQ
CBX1
RABGAP1L
GBA
CAT
MAPRE2
ARHGAP39
RPS7
MTRNR2L1
DMAP1
ZFP30
SAMD4B
AURKAIP1
SF3A3
GPRC5C
ZNF623
SSBP1
PAXBP1
COX16
DBNDD2
RBM33
JMJD1C
MAD1L1
TBC1D19
MMACHC
CCDC163
SUMO3
SELENOH
GALNT1
RPS29
CCDC130
PRRT1B
DCP1A
FRA10AC1
TRIP4
C16orf54
PEX3
ADAT2
RPL27
REM1
DEFB124
HTR5A
COMMD2
MED23
TMEM242
RBBP9
TTC32
DNAJC25-GNG10
DNAJC25
MSRA
DSTYK
NPAS4
LUC7L2
RNASET2
FMC1-LUC7L2
FMC1
TTLL12
OAZ3
SUPT7L
SLC4A1AP
SLC24A1
INTS14
TATDN3
NSL1
ACTL8
ZNF566
EIF2D
ZMPSTE24
YJU2
INTS12
GSTCD
NME1-NME2
NME1
ZSCAN31
SLC33A1
CLTB
NDUFS7
CANT1
TACO1
KDM3A
ZNF32
TMEM44
STX18
LARP1
RPL37
POLR3B
CALCRL
LSG1
MNAT1
TEFM
REEP3
GTF2H2C_2
DLAT
TMEM41A
DRG2
STC1
RPS14
GTF3C3
HMGB1
RMDN2
NEMF
TDP2
ACOT13
DNAJB12
UTP3
ZNF829
ZNF568
CCDC59
DHRS2
SRSF7
RTTN
PPIP5K2
GIN1
GTF2H4
ALG10B
GTF2H2
STX16
ST6GALNAC6
PAFAH2
KDM1A
ATP5MC2
TMBIM4
WDR11
SKP2
LMBRD2
TFPT
PRPF31
AP3S2
SAR1B
INTS5
GTF2H2C
MROH7
VTA1
NMBR
TMEM68
TGS1
USPL1
GABPB2
RAD54L2
PSEN1
MAMDC2
MOB4
MTR
PRDX3
DEK
HSD17B6
CLEC12A
DPY19L4
KANSL3
FER1L5
RERE
CD14
SLC25A51
POLE4
STAT3
TEX46
NME4
WDR36
CLK4
ATF7IP
MRPL44
NDUFB3
FAM126B
NCOA7
DISP1
ILF2
IPO4
PUM1
BANP
EIF3F
TOP3B
TBCK
AIMP1
TOR1AIP2
TOR1AIP1
VN1R4
TTC26
KMT2A
POLR2J3
TRMT5
SLC38A6
SAMD4A
ZNF408
ARHGAP1
ZNF317
STK19
DXO
ENG
FGD3
DCAF10
PPP1R3B
SLC44A1
SPAAR
CFAP298-TCP10L
CFAP298
MRPL40
HIRA
TIGD2
MITD1
MRPS31
TTI2
CDK5RAP1
CCDC97
PPP6R1
INO80C
RCAN1
EPRS1
RAB30
ZNF391
KLHL41
TMEM43
CHCHD4
CLDN4
MTIF2
HERPUD2
PARP15
SLTM
BAIAP2
SNAP47
LMBR1L
JMJD4
CEP72
CDYL
ARRDC2
H4C8
MRPL21
IGHMBP2
RNF217
ZNF426
BNIP1
TSEN15
SLC35G5
PSMF1
SLC41A3
NR1H3
ACP2
MRPS18C
HELQ
COX7A2
CCNC
TBL1X
RGPD2
RGPD1
THAP6
IL36A
OPA1
S100A9
YY1AP1
DAP3
CCDC150
SNRPB
TMEM79
SMG5
PPIG
LBR
BMS1
DNAJB13
IL21R
NSA2
GFM2
SLC45A4
PRKAG2
GLIPR1L2
C8orf37
MRPL48
UBE4B
SMG8
COPS7B
NSFL1C
ATR
LRIG2
USHBP1
C18orf21
NBPF1
REN
H4C11
FAM133B
NUP54
MRPL1
BRF2
WDR74
PDCD6IP
GALK2
LRRC61
H4C12
EIF1AD
BANF1
CELF2
ANK1
USP30
IQCF2
XKR7
PRIM2
ZNF554
IQSEC3
IQGAP2
ZNF383
C1orf167
AARS2
ADNP
ZNF292
ZNF772
TTC5
SNIP1
DNALI1
FRG1
TRUB2
COQ4
AUH
PES1
MTBP
MRPL13
MTOR
CCDC88A
ATP1A1
MS4A1
TMOD1
MRPS23
GSTA4
FGF1
RNF187
RAB6D
EPB41
COPS4
SCMH1
IL36RN
IL36B
ZSCAN25
SF3B6
FAM228B
SGCE
PEG10
KLHL20
HACL1
BTD
RUVBL1
GINS1
ARID1A
OR6J1
PRSS41
TSFM
HYOU1
TTC23L
TUT1
FANCI
GTPBP3
ANO8
PDRG1
PLEKHM3
TTLL1
ZNF165
IAH1
CDC73
SCNM1
LYSMD1
DUS1L
CEP85L
ZSCAN22
DDX18
TMED1
ZNF582
ALKBH3
SLC35A3
LSM5
NAT8
FBXO38
DHX16
NOP16
HIGD2A
ALDH7A1
SMU1
TMA16
NECAP2
FAM98B
COA6
RPL5
SNX17
EIF2B4
CLUL1
RBM45
TMEM222
TGFBR2
DRAP1
C11orf68
SH3BP5L
POLDIP3
RMND1
ARMT1
FAM160B1
ALG14
LRP6
ASPSCR1
WDR55
PUS10
PEX13
CLTC
ZNF385A
VPS13B
AVL9
LOC102724265
PDE6D
ZSCAN30
CPPED1
ALG10
SCAND1
AFAP1L1
MACC1
MRAP2
PDE7B
SUGCT
MPLKIP
EIF3E
SMARCD2
SERPINB1
HSPE1-MOB4
HSPE1
HSPD1
ACTR3C
LRTM2
C17orf75
HEATR1
SNRPD1
THOC2
R3HCC1
ZBTB45
PIH1D2
NKAPD1
SMIM13
DHTKD1
CD248
DPP9
C10orf88
ERBB3
DDX1
CCNI
PRKAR1A
CENPV
ZNF677
VN1R2
AQP10
SDHAF3
C5orf34
RNF125
HYAL1
GRPEL2
FBXL12
CTAGE8
CTAGE4
RNF6
GASK1A
ARID3B
POLR3E
ZNF670
SMG7
SREK1IP1
CWC27
TTC4
HDAC2
COPS2
RPS15
PRPF18
SEC13
ZNF501
GPAM
ISY1-RAB43
ISY1
NUP107
TMEM101
LGR5
HAX1
TPK1
RPS3A
CRYAA2
CRYAA
CEP120
SPARCL1
TMEM259
CCDC149
CCR6
ITFG2
WBP1
INO80B
PTDSS2
SLC35E2A
ZMYND8
ATG4C
MRPS14
SLC35B1
CCSER2
ABCC10
PHIP
APRT
SOD2
CRKL
CLASP2
TTC38
PKDREJ
TARS3
MRPL3
MAN2C1
GNAL
DCLRE1B
AP4B1
SRRM3
HUS1
ABCB10
MED18
ANO9
PFKM
SNRPB2
METTL9
ZNF609
METTL8
DCAF17
PCP4L1
MMEL1
CRH
MTHFD2L
HIP1
CCDC107
ABCG1
NFIB
AIG1
TPM3
CNN2
ERICH3
SESN1
CCAR2
C8orf58
TCTN3
FLT3LG
B4GALT7
NRBP2
ZNF518A
RPL7A
MED22
ARHGAP19
PRKAB1
SRP9
CREM
CCDC174
EEA1
AASDH
TIAM1
NOL12
ZNF512B
CCNY
ZNF546
NDUFS3
KBTBD4
SCGB1C2
CLUAP1
ZNRF4
CUL5
PRELID3B
FOXN1
DNAJC24
DCDC1
MAST4
ARMH3
IRF9
TPM4
PDGFD
ERCC6L2
ZFP42
NBN
MLEC
LARS2
TSPAN10
NPLOC4
CHD1L
CCDC115
KRR1
PACSIN2
CASC3
CTAGE9
ATP10D
PHC2
LIPA
CHMP7
ZNF699
NDUFA4
TPR
ODR4
MRTFA
ZBTB40
PIP4P2
DNAJC6
UBOX5
FASTKD5
VIRMA
PLSCR4
B4GALNT2
CASS4
SEC22B
RABGGTA
ARHGEF12
STOML2
CDIPT
RIF1
MEMO1
SMIM12
SEC23B
POLG
NDUFC2-KCTD14
NDUFC2
HLA-E
ZNF770
PLCL2
TMEM70
ELOC
ZCCHC4
MAPK1IP1L
KNL1
TIGD1
RPS26
EIF4E2
ZNF441
LPIN1
FAM13A
ZNF76
TMEM132A
RPS20
C16orf90
RNASE10
MSL2
GADD45A
SIVA1
NMNAT1
LZIC
RRP15
MRPS33
GARS1
FAM13B
TMBIM6
GATAD1
FAM25E
FAM234A
POLM
DCT
TRAF6
RAG1
ATP5MC3
ZNF571
ZNF540
ABCA3
PSMD3
ZMYM5
CEP57L1
TMEM107
KSR1
CGGBP1
NNT
ADRM1
CBWD5
PDE4C
UIMC1
RAB18
TAF13
CFAP20
TTC21B
GFI1B
MRPL39
SURF2
SURF1
TRIM5
CTNNB1
CCDC200
KMT2D
PRKAB2
HNRNPL
FUT3
QRICH1
GTF3C2
RBM5
CNOT11
RTN4
ANKRD40
PTPN12
NDUFAF1
TRMT61B
ANKRD54
STK32C
POLN
HAUS3
DNAJC11
RAD52
DDX41
POLR1F
TNFRSF1B
POM121L2
SNRPE
NUP205
MRPL42
COG2
KAT6A
FUT10
UGCG
TIMM22
ASF1A
WTAP
CNGA1
FAM207A
GOLGA6L7
RPL38
MAGOH
NFAT5
AQP2
S100Z
EIF2B3
ADPRS
WWTR1
SGMS2
RANBP9
LZTR1
DDX46
BDH1
SNRPD3
GUCD1
MRPL16
TMEM208
LRRC29
ZKSCAN2
ANK3
SPSB1
SLC39A3
PPP1R11
AMD1
PTGS1
THG1L
RPTOR
GLIPR1L1
CAPS2
SUGT1
NCBP3
CCNT1
AHCYL1
DNAJB2
C11orf49
SACM1L
RRN3
HTR4
CARD8
EIF3L
TANGO2
SLC30A6
TNPO3
TOMM20L
RAB5IF
C11orf86
SMAP2
KCNH1
PRMT5
YTHDC2
PSMB2
ZNF438
BRWD1
CUL2
ZNF114
PPIL3
NIF3L1
ATXN7L2
CBWD3
C2CD5
AAR2
SLC25A18
FBXW7
PRSS22
PIKFYVE