ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
GTPBP6
ITGB3BP
EFCAB7
AADACL4
MTRNR2L8
BSDC1
COL4A5
COL4A6
SUPT7L
SLC4A1AP
KCNJ15
C19orf18
IRF6
MTRNR2L2
MSH3
DHFR
ZNF408
ARHGAP1
GABPB2
GALNT1
KDM3A
ATF7IP
RBM33
YPEL3
TBX6
KRBA1
PAXBP1
LGALS3BP
TMEM79
SMG5
CDIPT
RPS26
THG1L
CANT1
DHRS2
ZNF571
ZNF540
CALCRL
UBB
PRPSAP1
ARID1A
CCL20
RPH3AL
TCTEX1D4
BTBD19
RPL27
HDAC8
TFPT
PRPF31
AHCYL1
PIH1D2
NKAPD1
KAZN
CELF1
CCNI
NDUFB3
FAM126B
PLA2G2A
CLPTM1
CELA2A
LRIG2
GTPBP3
ANO8
AURKAIP1
MAP3K14
SSBP1
RGPD2
RGPD1
RHOQ
ATP6V1E2
PPIL3
NIF3L1
PPP6R1
RCAN1
SERPIND1
RBBP5
INTS5
ZDHHC6
VTI1A
ARTN
EVPL
RPS24
POLR3A
ZNF577
NOL12
ABRACL
SLC39A6
GTF2H4
NEK2
LY6K
ISY1-RAB43
ISY1
CDK12
KDM5C
RAG2
IFTAP
ARHGAP39
MAST2
EIF2S1
ATP6V1D
APOA1
RAD51AP1
C12orf4
DUSP6
ZNF302
ZNF383
CREM
PDE12
IL17F
TNFRSF1B
SIRT3
PSMD13
TBL1X
MRPS33
UBE3B
SLFN12
RABGAP1
ARHGEF2
CD2BP2
PRSS41
GBA
ZNF585B
MMACHC
CCDC163
BCL10
FAAP20
DNAJC16
CASP9
ELFN2
SLC33A1
NBPF1
AKIRIN1
COX7A2
WDR83OS
WDR83
MAN2B1
BAIAP2
HAX1
SNIP1
DNALI1
AP1G1
STX1A
TPM3
ITFG2
IGFL4
GCNT7
FAM209A
B4GALT3
TTC26
SF3A3
MTF2
ERICH4
DMAC2
ZW10
AAAS
LACTBL1
GPC6
THEM4
ZMPSTE24
ILF2
TRIM5
TRIM22
COIL
ZNF750
NME1-NME2
NME1
LRP6
PPRC1
DYNLRB2
ARMCX5-GPRASP2
ARMCX5
TMEM242
EPRS1
C3AR1
ARID3B
KCNH4
HCRT
STC1
NCOA7
EIF3F
SCMH1
LIMK1
SELENOH
IFI6
YWHAQ
COX16
NEMF
COPS4
WDR55
TNPO3
MICALL1
MTR
STK40
ZNF572
CD14
AKR1A1
SNRPD1
RFFL
NID1
DDX42
CCDC47
LMNA
PARP15
TYSND1
HEMK1
C3orf18
YTHDF2
CASP10
GLIPR1L2
CYB561D1
AIFM1
MRPL54
APBA3
JMJD1C
CHMP7
VPS35L
CEP120
USO1
COL18A1
TPK1
PHC2
PLEKHG1
MXI1
C1orf174
PRRT1B
RERE
MRPL1
PACSIN2
ZNF790
RABGAP1L
RPL11
CNGA1
INTS2
RNF125
TTC39C
LSG1
RMND1
ARMT1
HEATR1
ZNF226
FNTB
RNF207
DNAJB12
MED11
PLAAT2
TTLL2
RPA2
ZNF793
KRT19
TIMM10
REXO4
ADAMTS13
SLC25A53
KDM6B
PHF5A
ACO2
ZNF335
NR1I2
ZNF56
CGGBP1
LIG3
C3orf38
INKA2
DDX20
CDH1
CCNC
MTBP
MRPL13
TBC1D19
MROH7
EIF1AD
BANF1
MIDEAS
SLCO1A2
AGTPBP1
PLEKHH2
STAT3
TRUB2
COQ4
TUFT1
SHOC2
BBIP1
SH2D5
ITPR3
BEST4
TRAFD1
CCDC130
PLK3
RIMBP3C
RIMBP3B
RSPH3
PEAK1
HMG20A
PLAU
GAPDH
UFC1
UQCRC2
GPX1
ZSCAN4
PSMB5
CLASP2
TMEM107
SNX27
TXNRD1
NYX
CEP162
CPN2
NHLH1
TUT1
TRMT11
EIF5A
CALCB
ZBTB40
RBM25
ZNF331
MIS18BP1
RCC2
ASAP3
NOL8
CENPP
DYNC2I2
SMG9
SLC35A4
APBB3
TMEM247
CRTAM
SCT
CDHR5
RBMS2
GTF3C5
FEM1C
CLCN3
CD24
MTMR11
RCAN2
NRL
FRRS1
DCAF11
DUSP14
AMHR2
CCDC97
TRMO
PSMB7
SIN3B
BNIP5
ANKRD1
BORCS7
TIMP4
RFXANK
BORCS8
USP9X
PCNP
MTHFD1L
FAM184A
CSTF2T
ZNF461
HAPLN2
NME7
BLZF1
C19orf25
CLN3
APOBR
RHOD
ZNF623
ZNF829
ZNF568
ZNF221
TIMM9
KIAA0586
PRKCSH
CCDC151
ZNF566
AASDH
TBC1D22A
TNFRSF1A
CASP3
VGLL1
ELSPBP1
BSPH1
ZSCAN30
PXT1
KCTD20
WSCD1
TCIM
KDM1A
TEX46
ZSCAN22
SCYL3
SLITRK5
FAM89A
KCTD9
CDCA2
RCN1
GORASP2
ZKSCAN2
POMGNT1
EFHD1
TRMT1
NACC1
LURAP1
ZNHIT3
NAV2
HEBP2
JUN
NTN1
TTC31
CCDC142
PGLS
RIN2
OCIAD2
ZSCAN23
MNAT1
XPNPEP3
ST13
BNIP1
SMG8
SESN1
CEP57L1
UIMC1
TRAPPC8
TM2D1
SUGP1
MAU2
STAT6
CCNG2
SLC7A11
SCARB1
GAL3ST2
KLHL34
SYT16
FRA10AC1
RPS3A
IRF9
ADAT1
DLX4
ZFP30
WDR11
CCNY
INPP5A
UBQLN1
TBCB
POLR2I
OVOL3
ADRA1A
EXPH5
PLS1
SLC39A9
ERH
CLASP1
TFB1M
EFCAB14
MYO1B
PPIP5K2
GIN1
SLC41A3
RBL1
ZRANB2
HOXB13
SUMO3
UTP3
PRPF18
FAM234A
TOMM40
ZNF300
GPATCH3
TIAM2
CTSB
C6orf118
CD320
GNA12
TBC1D1
RIPPLY3
FBXO46
FCRLA
MSRA
CPD
CHPF2
ABCF2
PEF1
MRPS18C
HELQ
SGMS2
NUDT5
CDC123
SULT1C2
NUDT9
NOP16
HIGD2A
EIF3E
NFYC
PLPP5
PSMD3
ARMC1
CMSS1
IAPP
RAI1
NDUFS7
MED18
SPSB1
TRIM25
EIF2AK3
CSNK1E
RTL9
ISLR
SFXN3
PDZD7
BANP
SMIM12
ARHGEF18
STBD1
PEMT
FERMT3
CACTIN
RGL2
CELF3
TRPV2
CARHSP1
RIIAD1
AQP12B
TTLL12
ALG14
LZTR1
SNRPD3
GUCD1
SIRT4
C19orf48
PREPL
CAMKMT
ZXDC
ROCK1
SLC1A3
KLF6
TTC32
PES1
VPS13B
ZNF518A
NIP7
COG8
HBS1L
LRRFIP1
SH3BP4
TEFM
RPS27A
CLHC1
RASL10B
OPRL1
LKAAEAR1
MRPS23
SUGCT
MPLKIP
SPEF2
NHSL1
RPS7
TIGD1
EIF4E2
EHD2
UFD1
CDC45
TXN2
RPL26
GTF3C3
OSBPL8
ORC2
POLD4
RUFY4
PHACTR4
SPR
HACD2
KAT7
PLK2
RETREG2
CNPPD1
CLDN7
UBE2F
WBP1
INO80B
SOD2
WTAP
TMBIM1
TTC14
ZNF2
FBXO7
SNX3
ABCD2
NRDE2
SGSM3
FURIN
PIP5KL1
PDE11A
RBM45
CLTC
PDZRN3
C16orf92
IFT46
NEURL4
TEF
ECPAS
PIK3CB
ZNF165
PUS10
PEX13
KIAA0319
ALDOA
NECAP1
CES3
ZNF14
PSG9
TTC9B
PDXP
APOL1
CCDC59
TMOD1
CEP85L
TMEM259
CCDC107
CNN2
SF3A1
CCDC157
STX12
HSCB
CHEK2
LIMCH1
ADAMTS16
CALD1
PRKAG2
CNIH4
IRF2BP2
CBR1
PNISR
YJU2
RPS14
ZBTB45
VPS52
RPS18
CZIB
KRTAP10-9
AKR1D1
CFAP43
DUX4
DNAJC25-GNG10
DNAJC25
INO80C
CCDC174
GABPA
ATP5PF
TUBB
MDC1
FDXACB1
C11orf1
LTBR
ZNF708
KLK10
SCNN1A
UTP18
MBTD1
STX18
DLAT
CLK4
ZNF585A
TMEM128
TMEM69
GPBP1L1
HAUS6
CERK
KIF20A
BRD8
TRIP10
WASF1
CDC40
KMT5C
C1orf158
SLFN5
RUVBL1
IPO13
ARMC7
ZNF260
SULF1
GABARAPL1
CENPA
NHS
CDK5RAP1
SFSWAP
OSGEPL1
ZBTB8OS
RBBP4
RHOT1
SPATA1
GNG5
S100A11
CMBL
RIPK4
ZFR2
TMEM89
CPPED1
CCDC115
RIF1
SASS6
COPS7A
GLCE
CLCN4
POLR2J3
UBXN7
ARID5A
ZFC3H1
THAP2
USP22
ZNF24
CYP27B1
METTL1
EEF1AKMT3
GABARAPL2
NKX3-2
SLC25A44
AKR1B15
PEX3
ADAT2
IPO4
POLG
DDX41
TAOK3
CRTAP
CTH
LIMA1
WASF2
G2E3
PLEKHG2
MAN1C1
EPB41L3
MOB4
MRPL48
TIAM1
MEGF8
ABR
PIGL
NCOR1
DLGAP4
ZBTB25
ZBTB1
ADGRL1
CEP126
ANGPTL5
BRCA1
ACSL1
DNAL1
LRP10
TMEM53
ARMH1
RFTN2
DMAP1
UBOX5
FASTKD5
CDK14
MEIG1
TIMM50
GCNT2
IGF2R
DCLRE1C
IFI44L
PTPA
CRAT
PPARGC1A
ABI3BP
TMEM222
SPRR2F
STK32C
DHX32
CORO2A
PMF1-BGLAP
PMF1
SRSF4
NCF4
SRSF1
GTF3C6
SOCS6
LRRC27
SLC27A1
ATXN7L3B
DHX16
ATG4C
TARS3
DDX46
PPOX
DYNC1I2
ANKRD17
RPF1
MRPL27
EME1
HSPA5
FAM222B
FUCA1
CDK5RAP2
PDE10A
THOC5
POLR3E
MRPS14
SLC35E2B
AP3B1
CALM2
TES
TNFAIP3
SBNO1
TXNDC17
KIAA0753
ADIPOR1
HTR3A
LYPLA2
PAFAH2
TMEM101
TPD52L1
FOXO3B
DOCK3
CHRNA9
MTUS1
AP2M1
RPS29
LCN8
CD248
NDUFS3
KBTBD4
MAD2L1BP
GTPBP2
APOL2
TAOK2
INPP4B
MYEOV
GALM
GTSF1L
ZBED9
LRRC49
TAF12
TM9SF4
ACP3
SECISBP2
SRCAP
LOC730183
CSF3R
DONSON
CDC42EP1
FHL1
SULT2A1
LARP6
ZSCAN25
THOC2
DNAJC11
PIKFYVE
SMARCD1
UBL7
TRIM7
ATP2C1
FOXP4
HELZ2
POLR3F
DZANK1
ZNF573
HROB
CSTF3
UTS2R
TUSC3
GHDC
SLC6A18
TRMT61B
PRDM1
SPNS1
ZBTB20
KLRC2
ASB5
KLRC3
ZNF791
ZNF490
VPS45
MCCC1
NAA38
PDE4DIP
S100A13
MUC1
HIRIP3
CDK11B
NSUN3
DHFR2
TMEM88
CYB5D1
UPK3A
ZNF215
MBNL2
PHLDB2
CTSK
CHKA
S100A1
LMNB2
BRD4
SEC16B
BCAP31
ABCD1
CASQ2
OR2D3
PTDSS2
ANO9
TNFRSF19
HEXIM1
SMAD3
WDR5B
SEMA4A
RBM42
AGPAT4
ARHGAP18
SH2D3C
IFIT3
DDX3X
PRSS23
PLA2G6
F2RL1
CSDC2
ZNFX1
SPAAR
RAB30
TAF13
NEK4
TMEM138
CYB561A3
FAM124B
ACTA1
AARSD1
CD164
DSC2
XKR3
RAB40C
SPON1
PLCD3
ACBD4
HIBCH
FAM199X
HDLBP
DGKD
USF1
SCGB1A1
MBOAT4
C18orf21
PDCD6IP
QRICH1
DNAJB4
BCL2L13
FGD4
PDE4B
GLI1
ORAI3
CACHD1
USP54
DDI2
ZBTB7B
MED16
CHST4
TRIM10
ASXL3
ZBTB8A
CCDC74B
SELENOP
KIF2C
TIMM22
SCP2
RIMKLB
SPHK2
RPL18
FAM83E
PSMD8
NAPA
GP5
LMNB1
CDYL
GADD45A
ASF1A
GDAP1
SLC4A8
GALNT6
CMPK1
CARS1
KRTAP10-6
DHDDS
IREB2
DNPEP
CHD4
WDR75
GBP2
SYNJ2BP-COX16
SYNJ2BP
RPL23A
RAB34
VWA5A
APOBEC3G
PPIG
DNAJC6
CACNG1
RCC1
ACBD5
CENPW
LRIF1
PPIL4
ZNF764
COA3
CNTD1