ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4171357 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◣ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
CAT
YPEL3
ACYP2
PDE11A
FAAH
BAAT
FEM1C
AKAP10
FGD3
CYP17A1
ZNF562
C3orf14
DEFB124
FABP6
ZMYM5
NME2
SLCO1B3
CEP85
TAS2R4
VN1R2
ITGB3BP
EFCAB7
ZSCAN31
JAKMIP1
ACOX3
TRMT44
TMEM132A
SET
KMT2A
CDYL
EIF4E
ARHGAP39
BTNL2
CD47
CLK4
PES1
TCN2
PARP14
GOLGA6L7
THOC2
EHD2
FABP7
OTUD7A
THOC5
SLC35G3
RAP2B
ABCG1
ZNF280D
ZNF117
XKR7
MLLT3
PIAS3
ACTL8
IQSEC1
CCDC185
EID2B
NOS3
PSMB2
PCOLCE
RTKN2
POLE4
SLC35G5
ADORA2A
RABGAP1L
MRGPRX3
CCDC200
YWHAB
CT45A10
CD5
ZNF561
PPP1R12B
CYP4F11
CBX1
CT45A7
CT45A6
CT45A3
TMEM70
AKR1D1
FAM25E
DMAP1
MKRN3
SRPRB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SOGA3
ZNF609
NSFL1C
XPO1
ZNF623
DCTN4
TSKU
LOC102724265
ATF7IP2
KIF21B
KAT6A
DISP1
DPYD
WIF1
ZNF426
MTF2
SIVA1
FRA10AC1
SMARCD2
CSRP2
DRAP1
C11orf68
STX16
LUC7L2
FMC1-LUC7L2
FRMD3
KRTAP19-2
PITPNM3
ORC4
MBD5
NSMCE4A
FUT3
BARHL1
SPOCK1
DUSP6
KRT72
PIP4P2
TRIM32
ASTN2
PGK1
RNF130
CRLF3
SKP2
LMBRD2
NPAS4
MYORG
PLCH1
NOD1
CCDC88B
BRWD1
DPY19L4
TMEM41A
ZNF114
SMU1
ZNF341
RNF207
EVI5
EMC9
RABGAP1
BTD
LHX4
TEX19
IFNB1
HDAC1
TCF4
ZBTB40
ANKRD54
NFAT5
GSTA4
SLTM
QSOX2
SSB
RAB23
MAIP1
AURKAIP1
HTR5A
N4BP2L2
FUT10
BRMS1L
MED23
MOB4
TOR1AIP1
RBBP5
CFAP92
HSPE1-MOB4
HSPE1
HSPD1
TLE7
ITGA4
CDH10
SERPINA5
ACTN2
C5orf49
NEMF
ZNF76
C1orf54
GTF2H2C_2
GTF2H2C
SSBP1
PKD1
SLC44A1
DDX31
MYOM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPS31
NELFCD
ZNF326
JMJD1C
REEP3
FRG1
LIG4
ABHD13
DAB1
ACADM
NUF2
LARGE1
INTS12
GSTCD
ADNP
MRPL44
PRELID3A
RPS7
FRMD4A
NCBP3
NDUFS7
DSTYK
GTF3C5
TTLL12
ZKSCAN2
CAMK1D
ANO5
SAMD4A
FAM136A
RASEF
MTERF4
PTPRCAP
PDCL2
TMEM242
MIER1
CCDC130
ZNF567
ANK1
NAA35
CPPED1
IL1R1
WDHD1
SOCS4
CLUL1
PRAME
HLA-DPA1
ZCRB1
PPHLN1
RUNX2
TRMT5
SLC38A6
AR
OR6C1
FAM90A1
DCP1A
WDR11
SLC39A3
TRMT1L
SWT1
EIF2D
DCAF10
REXO4
COMMD4
AP5B1
UBE2O
AANAT
FER
NDFIP1
HSD17B12
SNIP1
SFPQ
UNC80
SIN3B
CFLAR
ZNF362
KDM4E
RAB37
GTF3C3
CLTC
M1AP
PTEN
KLLN
KDM3A
HYAL1
TRIP4
USP9Y
RTTN
DHRS4L2
SCNN1G
ALDH3B1
PPP5C
GPR50
DNAJC6
GLS
BTBD11
TC2N
ZNF668
ZNF646
B4GALT7
LY6L
NUTF2
CENPT
RHEX
ELOVL2
RDH16
RGPD3
ARHGEF12
ADAMTS3
ART1
USP30
COMMD2
CCNG2
PRSS50
CLTB
RCOR3
NUDT4
NUDT4B
C17orf75
BSDC1
PPIP5K2
GTF2H2
RAD54L2
TMEM65
JAKMIP2
ALG1L
IQSEC3
MEMO1
MTRES1
VANGL1
HSD11B2
WDR74
FAM207A
DUSP4
NCAM2
VANGL2
FGF8
ABI2
SUN5
HGC6.3
TACO1
PUM1
TLK2
MAP7
PER3
NME1
HAO1
STAU1
VWA8
TMA16
PEG3
CLEC9A
ZIM2
RAP2C
ARHGAP19
FAM160B1
YAP1
GK5
TRAPPC5
FCGRT
BECN2
SPDYA
CDA
PHF21A
NEK7
RSAD1
NOXA1
KDM5B
PSMF1
KIAA1549
LRRC37A3
TTC26
DUS1L
WDR43
BMS1
PUS10
PEX13
INAFM2
CAPS2
NEGR1
ZPBP
SF3A2
PLEKHJ1
CPXCR1
DRG2
BOLA2
BOLA2-SMG1P6
BAG3
SAMD13
NGLY1
AKAIN1
DACH1
CHRNB2
DDHD1
WNT16
HOMER3
ZFP30
SLC35A3
TMED1
KMT2D
WNT5A
FOXJ3
EYA1
ZNF354C
BCAR3
AGPAT3
KANSL1
RSPO2
COX16
CALCRL
CCDC88A
FAM13A
KDM3B
CALM1
SEMA3D
GRK7
TTC32
IST1
CAPRIN1
CNOT6
ZC3H11A
ARHGEF2
KLHL11
NRG2
PRUNE2
NTSR2
ZC3H14
BSCL2
GNG3
C2CD5
KAT6B
NCOA7
CHD1L
PRKAB2
EI24
RAB12
RNF213
EIF4A2
MLLT1
SF3A3
KCNAB2
TGIF1
MNAT1
SLC25A51
RNF6
ATXN7L2
CSRNP1
CRYBG1
FTCDNL1
BAZ2B
GJB7
PXDNL
ZMPSTE24
ZCCHC8
ACTL10
RANBP17
CCDC181
ASB14
UTP3
TMEM68
TGS1
CUTC
COX15
PIGQ
IQCA1L
H1-6
COPS7B
RPS20
SMG7
GARS1
PSMD11
EPS15
SYT1
TP53I11
SUGCT
MPLKIP
HDAC2
PLCL2
BRD1
PPP6R1
METTL9
NBEA
MAB21L1
TAPBPL
PDE4C
INTS10
ANKAR
ZMYM4
TCERG1L
PCID2
CUL4A
TFE3
MLLT10
STYXL1
HSF5
LAMB3
PHIP
RABGGTA
SECISBP2L
BOLA3
OR2L13
CNKSR2
BAG2
SIDT2
CERS3
LAMA2
SLC24A1
STAT3
TMEM38A
SMIM7
C11orf52
C18orf25
ZNF398
ATF4
RAB38
CCDC97
POLDIP3
SUZ12
ENOSF1
ULK2
RCOR1
RNF215
MYCBPAP
CTAGE1
RAB6A
PRKG2
TCF12
VPS13B
INO80D
RPS14
QRICH1
SCG3
DNMT3A
NCAM1
CDC42SE2
ALG10B
FAM98B
GPAM
TOMM20L
KCNH1
OPRM1
ZNF669
ARFGEF2
COLEC11
CLBA1
SOWAHC
SEPTIN10
OR51H1
TEFM
POLR2J3
ADRM1
GABPA
ATP5PF
BOLL
SLC25A31
NECAP2
DDHD2
SSBP2
ZFP64
ID4
LRFN3
HMGB1
USPL1
LYZL2
SAR1B
SLC39A13
CBR1
CEP41
CPSF1
TMEM229A
HDHD5
PCDHB5
TOP3B
TTLL1
ZBTB6
EPHA10
SEPSECS
FZD9
INO80C
LRP6
PRELID3B
AGK
ZNF605
SNTG1
LHCGR
LTBP2
LRRN1
CFAP44
RGPD5
RGPD8
ZNF808
KIF21A
KMT5B
CBX3
TYMSOS
TYMS
HNRNPA2B1
WASHC1
GDAP1L1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
AGGF1
WSCD2
ANKRD62
CENPV
DNAJC11
CDK12
HNRNPD
LEMD2
ZNF639
MAML3
CFAP298-TCP10L
CFAP298
CCAR2
VPS29
RAD9B
SOCS5
DDX59
RCAN1
SCAND1
DHRS13
GOLGA3
NTNG1
PAFAH2
TGFBR2
RTN1
DNAJC21
STEAP2
GTF2A2
FAM20B
RORA
VTA1
NMBR
ZNF391
NEUROD4
SLITRK1
IL18R1
STX18
STC1
NBPF1
ZCCHC4
ZNF846
POLR3G
MBLAC2
HM13
EXD1
CHP1
AMOTL1
OSBPL1A
GADD45G
MTMR6
BMF
TM4SF19
MYF6
ABCA3
SYT7
LNPEP
MARCHF11
JADE1
CASP8
VPS37D
DPP6
RNF144A
ZIC2
ATAD2
RABEP1
RPL26L1
KCTD8
ADGRL3
KCNB1
SMG8
ZNF292
TPR
ODR4
FGD4
ZFP41
EFCAB13
CDC16
PTPRK
CLUAP1
GEMIN5
RBL1
ING2
SPDYE14
SPDYE10P
CASTOR2
ADAMTS1
TTI2
SPEF2
MEX3C
COQ2
CALB1
RAVER2
NMS
KCNN3
UBE2D3
HERC6
MANBA
SELENOV
SELENOH
CDC73
SENP1
PFKM
ZC3H6
TDRD12
LSG1
SNRPB2
MKRN2
C1orf53
PPP2R3A
DNAJC15
GLUL
TIGD1
EIF4E2
GFI1B
MED4
TSC1
NUCKS1
INTS9
HMBOX1
YPEL1
CDC14C
POLR3B
ZNF829
ZNF568
CHMP7
GTDC1
H3-3A
RAB11FIP1
CEP72
TPK1
MAST2
DHX40
ARID2
TSEN54
CASKIN2
SLC29A3
PATZ1
CEBPA
METTL8
DCAF17
MYOCD
MEF2A
PDGFD
UIMC1
RWDD1
ROBO3
SPRED1
GAP43
PBK
PDCD4
B3GALT1
KCNH5
RNF187
VIRMA
NAA38
SULF1
HERC5
MARCHF6
CHD3
MRPL48
YTHDF2
FBXW4
MAP2
ZFAT
ZFAND6
ATF1
ARL11
LRFN2
SEC61A2
DAZL
GGN
FXN
VPS36
FNTA
CHRM3
TMEM63C
PARP8
PTPN4
TUT7
USP3
GGACT
SAV1
WBP4
ELF1
RNF24
PALLD
CTNNB1
STK31
TDRD9
NBN
SPAG9
GDPGP1
CIB1
SLCO4C1
LARP1
GCLC
PRDM4
PLCXD1
CCDC178
CCDC166
FUT9
METTL25
CCDC59
CLPB
WDR47
SLC4A8
PPP2R2B
TEAD1
SMAD5
ESCO1
PPP1R3C
PRRC2B
PYROXD1
ATL1
CFAP91
SLC12A5
KANSL3
KDM1A
GTPBP3
FAM234A
ANO8
STON2
PFN2
CCNC
BNIP1
FOXN3
EBPL
GNAL
OTUD7B
CHRFAM7A
PRPF3
WIPF3
TATDN3
NSL1
CDK5RAP1
KLHL20
WDR24
C1GALT1
SKIDA1
VPS16
PCED1A
NCOR1
SMC1B
RIBC2
ZNF518A
SPECC1
ANKRD36B
MARCHF7
GTF2A1
USP25
IGSF11
TEX55
RBM46
SYCP2L
RSF1
ZBTB37
RBM12
CPNE1
RHCG
GPR26
TNFRSF10D
ATL3
CDC42EP3
ATR
FAM133B
GNG2
SOX30
TEX22
PATJ
PDE4DIP
PIGBOS1
PIGB
BRIX1
RGPD6
CDC7
CTNND2
ETFRF1
CFAP94
SUGT1
GPR37
TM7SF3
TDRD5
MAPK1IP1L
CYREN
SEC24B
BTRC
PLAGL1
GTF2IRD2B
TMC7
KDF1
VPS37A
CNOT7
PAG1
ATXN2
BTC
TAOK3
CCDC50
UTS2B
BRPF1
SCN9A
ELL2
PRKAR1B
CHN2
PGBD2
TRPC4AP
ZNF43
SH3YL1
ACP1
SHCBP1L
BIRC6
PLD4
SAP30
EXOSC6
CTNNA1
LPGAT1
CADM1
MTHFD2
RIMBP3C
RIMBP3B
IMPA1
PPIL4
KCNV2
NPL
TMEM45A
SLC12A9
EPHB4
FOXR1
ISY1-RAB43
ISY1
DBF4B
GOLIM4
PTGS2
MAEL
CAMLG
ATP8A1
C7orf31
SPR
TIPARP
SCYL3
N4BP3
GALC
DPP9
TOX4
RAB2B
SCMH1
SPTSSB
RPS29
FZD1
TASOR
ELK4
HDGFL1
FDFT1
GOLGA7B
FANK1
SYDE2
UGCG
PDE5A
EPM2A
ST6GALNAC5
PCDHGB4
LCLAT1
SRSF9
DYNLL1
HERC1
ASPM
ZMAT3
TAF1L
MTRNR2L8
MTRNR2L2
YWHAQ
MAPRE2
GBA
SNX16
SAMD4B
TARS2
TBC1D19
PEX3
ADAT2
RPL27
PAXBP1
SUPT7L
SLC4A1AP
RBBP9
DNAJC25-GNG10
DNAJC25
SLC33A1
RPL37
GTF2H4
DNAJB12
INTS5
MTR
ATP5MC2
GABPB2
RERE
TFPT
PRPF31
IPO4
FMC1
ILF2
ATF7IP