ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
ITGB3BP
EFCAB7
CCDC200
MTRNR2L8
BSDC1
COL4A6
COL4A5
SUPT7L
SLC4A1AP
KCNJ15
ZNF408
ARHGAP1
WDR74
GABPB2
KDM3A
ATF7IP
PAXBP1
YPEL3
RPS26
SMG5
TARS2
CDIPT
UBB
RGPD1
RGPD2
MTRNR2L2
THG1L
ZNF540
ZNF571
PRPSAP1
RPH3AL
HDAC8
PIH1D2
NKAPD1
CCNI
NDUFB3
FAM126B
CALCRL
CELF1
AHCYL1
RPL27
LRIG2
TCTEX1D4
BTBD19
KAZN
PPP6R1
PDE4DIP
CLPTM1
AURKAIP1
PPIL3
NIF3L1
GTPBP3
TFPT
PRPF31
ZNF806
POLR3A
ZDHHC6
VTI1A
RBBP5
RCAN1
NOL12
SSBP1
INTS5
SLC9A1
MAST2
KDM5C
SLC39A6
ELP2
RABGAP1
UBE3B
KCTD10
ABRACL
EIF2S1
ATP6V1D
IFTAP
PDE12
IL17F
NEK2
CDK12
ISY1-RAB43
ISY1
MRPS33
GTF2H4
ZNF302
DUSP6
HAX1
LY6K
RAD51AP1
C12orf4
ZNF383
CREM
DNAJC16
WDR83OS
WDR83
GBA
ARHGAP39
TBL1X
SLFN12
SF3A3
MTF2
COX7A2
AAAS
NBPF1
B4GALT3
SIRT3
PSMD13
MMACHC
ZNF585B
FAAP20
CD2BP2
YWHAQ
AP1G1
IGFL4
SLC33A1
GPC6
LACTBL1
ZMPSTE24
EIF3F
TTC26
LRP6
PPRC1
COIL
TRIM5
EPRS1
DMAC2
ZW10
BAIAP2
SNIP1
SELENOH
STC1
C3AR1
DYNLRB2
ILF2
RFFL
HEMK1
PLEKHG1
TMEM242
COX16
CASP10
SNRPD1
RMND1
ARMT1
IFI6
TNPO3
DDX42
CCDC47
NEMF
GLIPR1L2
CHMP7
RABGAP1L
TPK1
CYB561D1
ZNF226
COPS4
PACSIN2
MRPL54
APBA3
ARMCX5-GPRASP2
ARMCX5
NME1
RPA2
AKR1A1
STAT3
RERE
RNF125
CEP120
STK40
ZNF790
MRPL1
AIFM1
MICALL1
LSG1
INKA2
DDX20
DNAJB12
WDR55
USO1
ZNF793
C1orf174
FBXW10
PHF5A
ACO2
HEATR1
INTS2
ZNF335
REXO4
UQCRC2
DYNC2I2
YTHDF2
TIMM10
JMJD1C
CEP162
MTR
CGGBP1
C3orf38
FNTB
EIF1AD
BANF1
MTBP
MRPL13
SLC25A53
TUFT1
PEAK1
HMG20A
SH2D5
TUT1
ZNF56
SLC35A4
APBB3
UFC1
RBM25
MED11
GAPDH
CCDC130
TRUB2
COQ4
PLK3
CCNC
CLASP2
TBC1D19
ZBTB40
TRMO
CALCB
RNF207
EIF5A
PSMB7
ZNF829
ZNF568
NOL8
CENPP
RPL11
RSPH3
FRRS1
NDUFS7
RBMS2
GPX1
CPN2
GPX8
CCDC97
SMG8
ZKSCAN2
SCYL3
ZNF331
ZNF461
RFXANK
BORCS8-MEF2B
BORCS8
PRKCSH
CCDC151
ANKRD1
GTF3C5
TIMM9
KIAA0586
ZNF221
PCNP
SIN3B
SUGP1
MAU2
MNAT1
BORCS7
CSTF2T
TRMT11
CLN3
RPL7L1
SCARB1
ZNF623
TRMT1
RCAN2
ZFP30
GORASP2
LURAP1
USP9X
ZNHIT3
NME7
BLZF1
AASDH
MTRNR2L9
PSMB5
TM2D1
ZNF566
XPNPEP3
ST13
SYAP1
FEM1C
ZSCAN22
RPS3A
ZNF300
WDR11
ZSCAN30
SIRT4
SLITRK5
SLC7A11
SULT1C2
ZSCAN23
BNIP1
FAM234A
PSMD3
STAT6
UBQLN1
TEFM
KDM1A
SLC39A9
ERH
NUDT5
CDC123
TFB1M
C6orf118
FRA10AC1
PPIP5K2
IRF9
CLCN3
C19orf25
ADRA1A
TCIM
MED18
RBL1
TBC1D22A
PLPP5
NAV2
UTP3
SESN1
CEP57L1
TTC31
CCDC142
ZRANB2
NIP7
COG8
ABCF2-H2BE1
ABCF2
TBC1D1
ELSPBP1
UIMC1
SPEF2
CCNG2
NRL
DCAF11
CD320
FCRLA
ZSCAN4
PES1
UFD1
CDC45
PLS1
GPATCH3
EXPH5
HOXB13
VPS13B
PRPF18
EFCAB14
RPS7
SOD2
WTAP
ARMC1
EIF2AK3
TTC32
TTLL12
CLASP1
RPS27A
CLHC1
CSNK1E
PIP5KL1
CLTC
EIF3E
PREPL
CAMKMT
SLC1A3
KLK10
CELF3
NCOA7
MRPS18C
HELQ
MRPS23
RGL2
DCTPP1
METTL25
CCDC59
LZTR1
TOMM40
GTF3C3
ZNF165
TRAPPC8
KIAA0319
EFHD1
GABPA
ATP5PF
C19orf48
SMIM12
CMSS1
KCTD9
CDCA2
PEF1
CBR1
OSBPL8
KAT7
IFT46
ZNF2
CACTIN
DLAT
RUFY4
SPR
CPPED1
TIGD1
EIF4E2
SNX3
ABCD2
ZNF14
NRDE2
SH3BP4
MAIP1
ALG14
RIF1
SFSWAP
ALDOA
PLK2
NECAP1
RETREG2
CNPPD1
NOP16
HIGD2A
ROCK1
HSCB
CHEK2
IPO4
CCDC107
TXN2
ZNF24
RPS14
POLR2J3
ZBTB8OS
RBBP4
SF3A1
CCDC157
TBCB
POLR2I
NEURL4
TPGS1
ADGRL1
EHD2
METTL1
EEF1AKMT3
CLCN4
PUS10
PEX13
TMEM259
SRSF1
PLEKHG2
UTP18
MBTD1
POLD4
INO80C
INO80B
CCDC174
KIF20A
BRD8
SUGCT
MPLKIP
TTC14
ZNF260
TBC1D2
GTPBP2
SULF1
LYPLA2
PIK3CB
MRPS14
IPO13
RHOT1
VPS52
RPS18
PEMT
MAN1C1
NKX3-2
CEP85L
ATG4C
ANKRD17
HBS1L
USP22
TXNDC17
KIAA0753
GALM
PEX3
ADAT2
MRPL48
DHX16
TMEM222
TMBIM1
SASS6
CZIB
PNISR
CORO2A
STX12
STX18
MDC1
TMEM128
ZNF708
DCLRE1C
GTF3C6
CDK5RAP2
LIMCH1
MOB4
THOC5
POLG
YJU2
SLC25A44
BANP
DDX41
OSGEPL1
FDXACB1
C11orf1
TM9SF4
CTH
HAUS6
ZFC3H1
THAP2
CES3
ADIPOR1
ARHGAP18
KMT5C
PRSS23
TMEM69
GABARAPL1
HACD2
WASF1
MBNL2
FUCA1
G2E3
CDC40
MEGF8
CALM2
TNFRSF19
COPS7A
FOXO3B
UBXN7
MRPL11
NSUN3
DHFR2
NAA38
CENPA
CYB5D1
LRP10
GHDC
IFI44L
RBM45
ZNF585A
DNAJB4
AARSD1
PTPA
MED16
CRAT
FURIN
RUVBL1
TMEM101
NDUFS3
KBTBD4
RPL26
TIMM50
S100A13
DNAL1
HTR3A
NHS
S100A1
SH2D3C
DNAJC25-GNG10
DNAJC25
PPOX
LIMA1
TAF12
RPF1
WASF2
BRCA1
DONSON
PMF1-BGLAP
PMF1
PIKFYVE
SNRPD3
GUCD1
ATP2C1
SMARCAD1
ACSL1
PPIG
TENT2
PRKAG2
HEXIM1
SBNO1
SLC35E2B
CSTF3
DMAP1
ZBTB45
SRSF4
COA3
CNTD1
GCNT2
APOBEC3G
BRD4
KANSL3
ZSCAN25
DDX46
CENPW
UBL7
POLR3F
DZANK1
SMAD3
SHB
ACBD4
AP3B1
GOSR1
FOXP4
SIAH1
CARS1
ZNF573
DDI2
SUPT4H1
ZNF506
ZBTB20
KLRC2
ACOX3
TRMT44
UBOX5
FASTKD5
DYNC1I2
ARHGAP19
MRPL27
EME1
SRCAP
LOC730183
SYNJ2BP-COX16
SYNJ2BP
ABI3BP
PAFAH2
RAB30
MTIF2
PDCD6IP
HIBCH
APOL2
WDR5B
TBC1D9
FAM71E1
EMC10
TTI2
SNAP47
JMJD4
DNAJC11
MRPS15
FAM199X
CYB561A3
TMEM138
KDM8
UBE2Z
LRIF1
LMNB2
LMNTD1
TRMT61B
NEK4
CRNKL1
CFAP61
PIGL
DNPEP
PDE4B
KIF2C
KIFBP
LMNB1
C2CD5
ANO8
FGD4
FAM124B
TAOK2
ATXN7L3B
CREB3L2
C18orf21
ATP5MC3
SPAG9
MCCC1
REPS1
IREB2
KLHL18
KIF9
FAM160A2
GBP2
CLUAP1
GDAP1
BCL2L13
INTS4
HIRIP3
AMPD3
PPIL4
TMCO6
ZNF576
IRGQ
SELENOP
DNAJC6
MTOR
CD55
PSMD8
PMVK
CSRNP3
ZNF254
NAPA
CHST4
VWA5A
IFIT3
FHL1
RTTN
QRICH1
PPIH
SMARCD1
ZNF48
INPP4B
CCS
CCDC87
ZNF416
TBC1D17
AKT1S1
DCAF10
SCP2
FKBP8
PRRG2
NOSIP
VPS45
SLC25A21
KIF15
KIAA1143
SULT1C4
CACHD1
INSYN2B
MSANTD3
ATAD3A
SEC16B
AARS2
NECAP2
SLITRK1
PSD
ZNF764
RCC1
MRTO4
EMC1
USF1
SLC30A10
FBXL15
NOS3
WDPCP
MDH1
SMAP2
RPL29
SPHK2
RPL18
SECISBP2
PDK2
AMOTL1
MUC1
CCDC74A
SULT2A1
FBXO16
MAT1A
GNAL
FBXW7
RPS19
CMPK1
WDR89
TMEM41B
SH3BGR
PLA2G4C
PHB
PKD1L2
SCGB1A1
POC1B-GALNT4
POC1B
TRPC4AP
EXO5
CCT8
GPN2
PRKCI
ZNF700
EGLN2
C11orf52
GFM2
SLC35B1
ZNF518A
ZNF791
ZNF490
ARRB2
SNU13
SLC35F2
ZNF599
PAM
WDR75
PRR3
GNL1
PTCD2
MRPS27
AIP
CCDC74B
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
SENP1
PFKM
DHDDS
ACP3
ARHGAP9
MARS1
HSPE1-MOB4
HSPE1
HSPD1
FAM13A
WARS2
IRAK1BP1
PRR14
ACBD5
ORAI3
GOLPH3L
RAI14
KIF27
COMMD2
C8orf37
PDE7B
TMBIM4
ATAD5
ELOVL1
ANK3
TNFAIP1
IFT20
EXOC7
STING1
ZBED5
MTFR2
ERGIC2
CDRT1
RRAS
RPL23A
DNAJC12
DDX18
SPNS1
ANK2
ALDH3A2
PNO1
PTBP1
GLRX
RPL32
NCLN
TMX2
MED19
PUM1
RPS15
SREK1IP1
CWC27
ARL14EP
PARK7
TRIM41
STAT1
BAZ2A
TAF13
UTP11
PRCC
COQ3
CUEDC2
ERAL1
CERCAM
SF3B2
RPAIN
NUP88
TBX18
AGPAT4
EXOSC5
BCKDHA
RPS29
SMG7
PSMA1
ZNF687
IPP
PSMB6
YLPM1
ARL6IP5
IWS1
TRIM23
TRAPPC13
SHLD3
CUTA
CDCA3
PIP5K1C
IQGAP3
ALG10B
C17orf75
RABGGTA
SLC30A6
RESF1
ANKRD13C
ANP32E
ACVR1
NUCKS1
TIMM22
PPWD1
CENPK
MYBBP1A
DENND6A
RBM42
GRIPAP1
CLASRP
CCNB1IP1
HMGB1
USPL1
KMT2A
SNRPB
CHD1L
PRKAB2
GTF2B
MDM4
UBXN4
NDUFA9
AKAP3
CASP8
RPL35A
IQCG
UQCR11
CABP1
RTCB
TMEM219
SCNM1
LYSMD1
SCAND1
MEMO1
THAP10
LRRC49
TCHP
ATP6V0E2
NAT10
ZKSCAN8
ETFBKMT
CHD9
PRKAB1
NOCT
CENPH
TNPO2
PRMT1
MED28
DTX3
ZNF391
APRT
ADPRS
CDK19
TMEM167B
CENPF
ZZEF1
CYB5D2
FAM217B
PPP1R3D
FBXO8
CEP44
RTEL1
MST1
KXD1
ELP5
CTDNEP1
BPNT1
MZT1
BORA
OXSR1
SUN1
CCDC171
RHOJ
AKIRIN2
KATNB1
GGTA1
SLC25A35
MEOX1
TATDN3
NSL1
SNX12
ZZZ3
ZNF484
ZNF613
NFX1
MYBPHL
ZNF593
C1orf232
PCNX3
SELENOF
HS2ST1
MAP3K11
LHFPL1
POLR3B
DRG2
SF3B6
FAM228B
ZNF570
ZNF569
SH2B1
DEDD
GAPVD1
EXD1
CHP1
WDR61
PPP3CB
DHRS4
TMED5
CCDC18
PIK3R2
KIAA0408
FGFBP3
LRRC29