ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065547 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◣ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
ITGB3BP
EFCAB7
CCDC200
YPEL3
MAPRE2
RABGAP1
PDE11A
WDR74
MTRNR2L8
ZNF829
ZNF568
ZFP30
SAMD4B
RABGAP1L
RBBP5
YWHAQ
ZNF623
STC1
MTF2
SF3A3
TARS2
DUSP6
NUF2
TTI2
SSBP1
DISP1
CBX1
MTRNR2L2
ARHGAP39
MTR
TMEM132A
AURKAIP1
ZNF117
CDK19
AMD1
RPS29
SLC33A1
DNAJC25-GNG10
DNAJC25
COX16
RERE
CALCRL
RBBP9
CAT
DNAJB12
FAM234A
MYO1H
UTP3
GBA
TBC1D19
CFAP298-TCP10L
CFAP298
RNF187
HLA-E
RPL37
RCAN1
ATP5MC2
TTC32
ISY1-RAB43
ISY1
GTF2H4
JMJD1C
MMACHC
PAXBP1
ELAVL2
ALG14
TRAPPC8
RAB30
CEP85L
PEX3
ADAT2
TMEM242
NEMF
ZSCAN22
COX7A2
MED23
WDR11
MRPL30
MITD1
ZMPSTE24
SLC45A4
C3orf14
GRPEL2
SUPT7L
SLC4A1AP
SAR1B
TMEM259
TRMT11
GABPB2
ATF7IP2
PPP1R11
UFC1
SULT1C4
COA6
ZNF134
PCDH15
FAM13A
TFPT
PRPF31
GLIPR1L2
RNF125
TRMT5
SLC38A6
DCP1A
KDM3A
TBL1X
ZNF391
NUP107
TATDN3
NSL1
REXO4
TEFM
MNAT1
METTL25
CCDC59
FABP6
ZNF165
PPRC1
HEATR1
PNMA2
CPPED1
NOS3
SLC25A53
BRF2
ATG5
CDC5L
RPS7
SNRPD3
GUCD1
ILF2
EIF3F
ZNF540
ZNF571
SNRPE
DMAP1
TACO1
GTPBP3
RCAN2
CCDC120
TRIP4
CEP85
NME1
PDCD6IP
RPS13
EIF2S1
ATP6V1D
MOB4
NDUFB3
FAM126B
TPK1
OSGEPL1
NEK7
ZNHIT6
SYT1
LUC7L2
FMC1-LUC7L2
FMC1
ATF7IP
LOC102724265
UBR2
SKP2
LMBRD2
ZNF561
DSTYK
MAN2A1
TTC26
REEP3
PAFAH2
ZNF292
HDAC2
AASDH
WDPCP
MDH1
CLTB
NDUFS7
EIF2D
NOP16
HIGD2A
GSTA4
ZNF461
POLR3B
IARS1
NAT10
PDE1A
MRPS16
CYCS
ATG4C
CCDC107
SEC23B
FRA10AC1
CCNI
ACOX3
TRMT44
TMEM41A
VPS52
RPS18
RPL5
AHCYL1
PLCH1
IL1RAP
HIGD2B
BBS4
SELENOH
RAB18
DNM2
TOMM20
HDAC8
H4C14
H4C15
UBE2L3
RIMBP3C
RIMBP3B
GFM2
TMBIM6
SF3B5
LOC100421372
HSPA14
CDNF
SLC35A3
KLHL20
SLC24A1
NCOA7
MRPS23
TM2D1
RUNDC3B
PLK2
CSTF2T
ZNF383
ZNF585A
COMMD2
LSG1
MTERF4
CCNC
TBC1D32
SNIP1
PPIL3
NIF3L1
FAM199X
SMG5
INTS5
RPL27
PPIP5K2
AARS2
DCT
COL4A6
COL4A5
THAP10
LRRC49
ZSCAN30
UCHL3
COMMD6
DQX1
PRIM2
FOXO3B
RBM45
RPS15
TUT1
BCL2L13
SLITRK5
ZNF790
FEM1C
PACSIN2
DHTKD1
CSTF1
AURKA
PARPBP
NUP37
MAIP1
PIH1D2
NKAPD1
FKBP7
BTD
PLEKHM3
TTLL1
KRR1
YTHDC2
DHRS13
SLC39A6
ELP2
HACL1
TMEM101
TARS3
GTF2H2
C10orf88
SPAG9
VTA1
NMBR
SMG7
ECHDC1
KRTAP19-2
UTP25
DRG2
UBOX5
FASTKD5
TSTD3
MRPS18C
HELQ
THOC5
HTR3A
TSPAN2
RGPD1
CEP120
RGPD2
ALKBH3
NUDT15
SRP9
RAB5IF
STK32C
TMEM275
TMEM30A
SLC35B1
CCDC150
POLG
SPATA5
NUDT6
DEDD
RSPH3
SNRPB
PARP2
MED18
PIKFYVE
HAX1
DYRK4
CRNKL1
CFAP61
B3GALNT2
BAAT
EPRS1
NR1H3
ACP2
SNRPD1
TMA16
INO80B
TNPO3
RPA2
RALBP1
SMIM13
MAGOH
LRRC29
VPS33A
CCDC90B
BRAP
ACAD10
EIF1AD
BANF1
POLDIP3
AIFM1
FAAH
IFTAP
MRPL1
ABCG1
CFAP20
EPHA3
CREM
TSSC4
ZNF791
ZNF490
ARHGAP24
ATP1A1
POLR1H
TMEM128
ZNF302
VPS13B
SCAND1
ATP5F1B
MTO1
ZBTB45
CC2D2B
RPS14
PDGFD
MAST2
GTF2B
DCLRE1B
AP4B1
IRF9
SNAPC5
CBWD1
TSFM
S100A4
LURAP1
DDX41
ZNF527
ZNF56
CEP350
PPIG
LTN1
SRSF11
LRRC40
ZZEF1
CYB5D2
OSGEP
APEX1
CUL5
ARMCX5-GPRASP2
ARMCX5
ALG10B
QRICH1
PARK7
NEK4
NKAP
AQP10
PPP6R1
TRUB2
COQ4
CCT8
ERCC6
CNIH3
INTS12
GSTCD
ZSCAN31
PUS10
PEX13
PBLD
HNRNPH3
PACS2
BRF1
EDEM3
STX16
CDC73
SDHAF3
RAD51AP1
C12orf4
HMGCR
TYW3
CRYZ
RANBP17
RTTN
TMEM43
CHCHD4
ATR
SF3B6
FAM228B
CCDC174
MRPL42
C6orf118
LMNTD1
BANP
ANO6
SHC3
HTR5A
TTLL12
COG2
RWDD1
LTA4H
AJUBA
MTOR
EFHD1
PROS1
SLC17A5
SLC35A1
MRPS31
MRPL48
FAM50B
GSTP1
C8orf37
SMG8
ATG101
INTS9
HMBOX1
NUP42
RBBP6
GALK2
COPS2
RPTOR
SASS6
LONP1
CATSPERD
NMT2
SRCAP
LOC730183
RBM7
C11orf71
PPP2R3A
GALT
TRAPPC2
OFD1
CCDC130
INKA2
DDX20
EIF5B
TXNDC9
FAF1
ZNF566
METTL7B
HMGB1
USPL1
SLTM
MRPL40
HIRA
ZSCAN25
TPR
ODR4
PRRG2
NOSIP
TDP2
ACOT13
TMEM167B
SRRM1
MAP7D2
GPR176
AP1G1
N6AMT1
FDXACB1
C11orf1
IRAK1BP1
PIGL
MAP3K7
PI4K2A
CBWD5
CBWD3
CBWD6
AAR2
SENP1
PFKM
CNTRL
C5
ZNF589
GPATCH3
ZUP1
STX18
TRIM41
RAMAC
APOL2
SH3RF2
SRA1
TFIP11
INSYN2B
CCDC43
SMIM35
FBXO22
ANO8
CHEK1
FAM124B
ZNF2
DHX16
SREK1IP1
CWC27
FBXW7
RANBP2
DHX8
PNISR
FLRT3
SLC9A3R2
TGFBR2
TIPARP
ZBTB8OS
RBBP4
DROSHA
C5orf22
CD2BP2
DENND2C
MTBP
MRPL13
RPS26
PNPO
SRP54
DARS2
CENPL
GJB7
ALG10
RMND1
ARMT1
TXLNG
INTS2
CMPK1
PLAC8
STAT3
MTIF2
CCDC97
COPS4
LRP6
TOMM20L
MDC1
RETSAT
ELMOD3
WDHD1
SOCS4
FOXP1
UBXN4
PCDH9
TARM1
TIMM17B
PQBP1
TOR1AIP1
PES1
SESN1
CEP57L1
STAU1
DDX27
C6orf226
PPP6R3
CLUAP1
CCNL1
TTC14
RPL22L1
RPAP2
GLMN
ERMARD
NUP133
TRMO
ZNF331
ZNF484
SYNE1
DCAF10
SLC44A1
CYB5R4
ZNF570
ZNF569
CIZ1
RNF207
AGPAT3
ALG9
PRC1
RPL37A
ZNF408
ARHGAP1
MRPL21
IGHMBP2
DDX18
ZNF286A
DNAJC21
UFL1
DUS2
DDX28
ZNF260
LYRM2
SS18
GLIS2
IFT172
ZNF562
RPS3A
CD55
BAIAP2
H4C4
KDM1A
CCDC124
RGL2
SLC3A2
POLR2J3
NECAP2
NUP205
EIF4E
NOL8
CENPP
TBRG4
CTH
DHDDS
ZNF14
ZNF518A
RPS19
FKBP5
HECTD1
PDSS2
ZC3H10
HEXA
UTP6
MRS2
FBXO16
PKD2L2
EIF5A2
EIF4G2
PHIP
POLR1F
SCYL3
SLC35E3
COMMD9
TAF10
PITHD1
ACTR3
YES1
DUSP12
SLC10A7
BASP1
ZNF714
WDR55
SUGCT
MPLKIP
CYB561D1
NUP155
SIAH1
CALD1
H2BC8
H2AC8
RNF182
NUP54
RPS12
ST7
FAN1
RBM26
ACYP2
EEA1
PTPN4
NOL11
ESCO1
EFCAB2
ARHGAP19
GLIPR1L1
CNOT1
PLD4
GAREM1
ZNF304
SNX8
OPA1
METAP1D
CRLF3
ZNF350
PDE12
ASB8
SLC25A51
SNX17
EIF2B4
DNAJC24
DCDC1
APRT
CRBN
POLR3G
MBLAC2
ABHD10
C19orf12
PRMT2
FAM160B1
DDX1
PIGK
SLC18B1
S100A13
MKS1
S100A1
MRPS33
GABPA
ATP5PF
ASNS
GFM1
UFSP2
HIPK1
PRKG2
ZNF184
ZNF684
NPAS4
KBTBD3
AASDHPPT
BOLA2
SIKE1
FOXP4
SLX1B
SLX1A
BOLA2B
PIK3IP1
CORO2B
CLASP2
MAPK1IP1L
DCP1B
RRP15
CHCHD6
CWC25
PPP1R8
MIS18BP1
ANK3
KIAA1191
NT5DC1
ERAL1
OCIAD1
INIP
EFCAB6
SERTAD4
PSMD6
NDUFA6
ALDOA
IFNAR1
RARS1
AP3B1
LZTR1
CZIB
SELENOT
CORO2A
LRRC46
ENPP4
CLIC5
FAM227B
DTWD1
ACTL8
U2SURP
THG1L
CSDE1
PLS1
TRIM5
HINT3
SH3GLB1
EPHA5
ZNF254
GTF2H2C_2
GTF2H2C
BMS1
SMU1
RNF216
CRB1
POLR2J
AGBL3
ANXA2
RAB3GAP2
STAM2
DDX39B
ACY1
WDR36
TMEM248
HBS1L
TMEM144
L3HYPDH
JKAMP
EFR3B
ZMYM4
ZFYVE1
PPP2R2D
PRPSAP2
IPO4
ZCCHC4
CDIPT
H4C8
MAST4
TRIM59
PRCC
CUTC
COX15
COQ8A
EIF3E
EEF1AKMT2
CUL2
PSMD14
KLHL32
LSM11
UMPS
PNPT1
TMEM254
ARRDC3
INTU
DPY19L4
ARL14EP
TTC21B
ZNF25
MPHOSPH10
MCEE
ZNF687
TTC13
ARV1
ATP6V1C1
TSNAX
THAP1
PUM1
GNAL
DPYD
VPS25
RAB11A
RNF11
WDR5B
CFAP410
RNF115
POLR3C
IFRD2
GMNN
LCMT2
ADAL
ZNF565
ZNF146
ZSWIM1
MEGF8
TRAM1
LAMTOR5
LNPEP
LIN54
ELOVL1
C11orf65
CSNK1E
MRM3
GLOD4
RBM34
STXBP3
PRDM1
MRPL17
TMEM69
VWDE
PRCP
BTG1
RIMS2
DDIAS
NBPF1
C18orf21
GOT2
UBE3B
KCTD10
TMEM106B
ZRANB2
SRSF7
DDX50
SEMA6A
MRPL24
HAUS6
ASCC3
CSRNP3
GTF3C6
MFN1
SORBS2
GORAB
SCNM1
LYSMD1
FGFBP3
C11orf49
ZNF354A
GOLM2
HMGN4
PSMD9
HPD
ARRB2
ZNF510
MTMR9
RLF
CENPV
MRPS15
ADAR
ATP6V1B2
ECI1
WRN
PURG
PGM1
HPS5
GTF2H1
KHDC4
TNS1
INO80C
SEC13
CGGBP1
C3orf38
NR1H2
COX18
SAYSD1
NEK2
ZCRB1
PPHLN1
ZNF420
DYNC2LI1
WDR61
AKAP1
TOMM40L
TOMM70
LNP1
PDE4DIP
RUVBL1
EIF2B3
NDUFC2-KCTD14
NDUFC2
GOSR1
VAMP4
IL11RA
ANKRD13C
P2RX6
CEP126
PGD
DYNC2I1
USP16
ZNF429
BVES
ZNF442
ANO3
ANKRD54
RFFL
USO1
PRR14
ZNF613
EIF2AK3
ADAM15
NDUFC1
NAA15
NDUFAF4
RIOK1
CAGE1
CEP162
LRRC61
ACTR3C
PPOX
HLCS
CYB561A3
TMEM138
LCA5
FANCI
CREB5
STIL
TGOLN2
LENG8
HELB
ARFGEF3
TINF2
SMAP2
GMPS
TPD52L1
ABLIM1
RNF146
ZNF221
IQCH
AAGAB
MMADHC