ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945294 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◣ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
HLA-DPA1
YPEL3
BAGE5
BAGE4
BAGE3
BAGE
TRPM3
BEST2
BAAT
PCGF3
PIK3R1
KSR2
KCNJ15
FAAH
HTR2C
ZNF611
GFI1B
RTN1
MAP4K5
BTD
ITGB3BP
EFCAB7
CCDC126
SLC25A38
PHOSPHO1
ZNF605
PROS1
MCC
IQSEC3
KCNJ2
GPR39
EDEM2
FAM104B
AKAP10
ZNF562
PRKG1
ZCCHC8
UBXN2A
C2
TKTL1
TEX28
ACTL10
SLC30A8
SNX16
FUT3
S100A4
ACYP2
TBC1D8
TBC1D30
FRMD4A
FEM1C
DEFB124
UBE2O
AANAT
DPY19L2
NPFFR2
LAMP3
ME1
PACS1
ZNF114
KLF17
ST8SIA6
PGBD1
LOC728392
HRH3
PDE8A
ABCG1
NECTIN3
PSMB2
NFRKB
VLDLR
LRCH1
SLCO1B3
TRAK1
ZNF117
THSD7A
GOLGA6L2
SWI5
GOLGA2
RAB30
SEPTIN11
DLK2
YWHAQ
ANTKMT
ZNF804A
ZNF280D
TSKU
HCN1
PRKAA2
C5orf24
NOD1
CNKSR2
ZNF44
DUSP6
SAMD5
IKZF3
KCNK3
LYPD1
SULF2
CEP72
MERTK
CDC42BPA
ARHGAP44
EYA1
H2BS1
TMEM52
ZNF426
HDAC2
EBF1
ARHGAP22
NIPAL1
CNGA1
CMTM3
EIF4E
VSTM5
TMEM131
TSPAN14
PANX1
APLN
CNTNAP3
GTF3C5
DGKK
PTPDC1
CNTNAP3B
PAM
PIP4P2
EPHA5
LY6L
KCND3
SAV1
SLITRK4
NUDT4
NUDT4B
TACC1
PLOD2
NR2F1
MEST
ZNF160
NOVA1
SLC8A3
CCND1
NOS3
UBLCP1
KCNE1
NTM
MAP4K3
TGFB1I1
PRELP
CEP85
PCGF6
FZD3
RBMS3
RNF144A
TADA1
SEMA3D
FABP6
ZNF211
ZNF860
OSBPL10
ADAMTS15
SLTM
ZNF561
PDE6B
FSTL4
RIOX1
DCTD
CCDC74A
ZNF695
MAGEF1
C1QL1
SOWAHB
SPIN2B
MYRIP
NCK1
ESPN
FZD1
ATP12A
NEUROD4
CLUL1
PLD5
KLHL40
PDE2A
CAMSAP2
RFWD3
ZNF676
FGF18
LRRC45
CENPX
SLFN11
SUFU
ACTR1A
SST
RRBP1
TMEM40
SERPINF2
KCNIP2
SIK1B
SIK1
EPS8L1
LXN
SH3KBP1
UFSP2
SUZ12
PRRT2
CRCT1
ORC4
MBD5
NEGR1
LYPLA1
ST6GALNAC4
MRGPRX3
FAM25E
OPHN1
SPOPL
DHRS4L1
PRUNE2
NAA20
YAP1
DNAJC13
RBPJ
THAP4
ZNF324B
GALNT13
BTK
ADAMTS3
CD80
SLC17A7
FAM50B
ACBD5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ZNF496
CCDC177
POLE4
SIGLEC11
KLF3
RNF220
PDE4A
TMCO6
METTL21A
PKMYT1
SCN4B
ANO6
STRBP
RAB6D
LONRF2
SMCO4
RYBP
GDNF
EEF1AKNMT
B3GNT2
SNCB
EIF4E1B
TEAD4
ANHX
EML2
ZNF563
ARF6
CT45A10
SATB1
PURA
KDM4E
PYCARD
PKD2
SCUBE1
VGLL3
FILIP1
TENM4
OLFM3
NRSN2
MAIP1
NFE2
MAST2
ATP2C1
CDA
GNG2
FAM102B
AGGF1
WDFY2
ZNF780B
NOS1
IL1R1
SLC35A3
CAB39L
SETDB2-PHF11
SETDB2
SSX2IP
DMRTA1
HIVEP1
SLC6A1
RFPL3
PDE11A
GUCY1A1
NCOA7
UBQLN2
DPP6
SEMA6D
FGD3
CLSTN2
NPHS2
PDE1B
VBP1
POTEF
FERMT2
ADAMTS5
TP53BP2
PXDN
FUT8
SCCPDH
CRH
SIX3
TMEM237
TRIM56
FAM240C
FABP7
PIK3CA
PTPRN2
TARS3
HINT1
KCNE1B
RAB23
ZNF521
SCHIP1
DHRS2
AMACR
PYM1
CMPK2
GABRA2
LRRC2
TDRD3
RBMS1
TAS2R4
GSTA4
GSTK1
SNURF
SNRPN
MAEA
ZNF888
ELMO1
LRP8
POTEE
DLG3
PLXNA4
STX2
OTUD7A
F8A3
F8A2
F8A1
KCNS1
ALAS1
RORA
PTH1R
ACSL1
GPR50
NLK
CYREN
OSBPL1A
GPC5
GNL3L
CDH10
MXD4
PABPC3
NRG1
RNF128
PAPSS2
CROCC
ZC3H14
GJC3
SORCS2
VRK2
CBLL1
MTFR1
UACA
ARID4A
BEND7
ART1
PCDHAC2
MYOD1
PARM1
GMFB
TMEM164
CT45A7
CT45A6
CT45A3
HP1BP3
CCL3
SLC27A2
BCL6B
ROCK1
CCDC74B
SETD7
NEXMIF
NR2F2
NUPR2
ABI2
ZFYVE21
XRCC3
PCDHAC1
LCORL
IQGAP2
PIAS3
GRAMD1C
HERC6
RIPOR2
SMIM14
TMEM60
PHTF2
ATP23
IKZF1
ADCY5
C3orf80
PAH
ASCL1
PPP1R2B
VN1R2
THEG
SPAG5
ATXN7L1
PCDHGB1
ST8SIA2
ADAMTS2
PLAAT2
MAOA
SP6
CMYA5
GDA
MAGEB16
ITGA7
FAM98A
EGLN1
TLK1
H3Y2
RABGAP1L
DCLRE1B
AP4B1
CAMK1D
CNOT6
STARD3NL
CEBPD
PAXBP1
OTUD6A
NFATC2
RPS6KA2
ZNF623
C9orf85
ABHD17B
SLC27A3
SNRNP25
POLR3K
MEIS1
TSNARE1
RGS7BP
JMJD1C
REEP3
GLI2
ZNF778
SNX33
NPNT
PCDH19
MTIF2
STIM2
PPIC
QSOX2
RNF130
RBX1
TEX13C
RAB6C
SHB
PRDM1
SDC2
PCDHGB6
NKX6-3
ADAM22
FANCF
AHCYL2
ERAS
CTSB
NDRG4
DYNC2I1
PIK3C2B
NDST3
CCL28
PHKA1
PPP1R1A
TUBE1
FAM229B
LPL
DMRTB1
SCMH1
TRPM4
LOXHD1
IGFBP3
MSL1
QSOX1
PROSER1
NHLRC3
CDH2
TIAL1
BECN2
CHST4
EPHX1
TMPPE
GLB1
APBB2
NCAM2
RALYL
GOLGA8A
ZDHHC22
PTPN5
FAM171B
ZC4H2
ZNF468
PLXND1
GALR1
CAMK2N1
CRLF3
BRD2
CDYL
CAMK2D
XKR4
VANGL1
NSMCE4A
RIPK2
TMEM182
ENTPD1
PIP5K1B
EGFLAM
LMX1A
KIF21B
KBTBD3
AASDHPPT
ZNF233
SPIN4
PLAAT5
PDE4DIP
TMEM14A
KCNAB2
RIMS1
DPH3P1
MARCHF11
PAPSS1
SGCG
ADPRHL1
SMAD3
TARM1
CPXM2
PCSK9
SOX11
CCDC200
BSDC1
WDR74
MTRNR2L8
RABGAP1
MTRNR2L2
NUF2
RBBP5
MTF2
CBX1
MAPRE2
GBA
CAT
RPS7
DMAP1
ARHGAP39
ZFP30
AURKAIP1
SAMD4B
SF3A3
SSBP1
COX16
TARS2
TBC1D19
SELENOH
CCDC130
MED23
TRIP4
PEX3
ADAT2
FRA10AC1
RPS29
TMEM242
RPL27
COMMD2
HTR5A
C3orf14
TTC32
ACOX3
DSTYK
NPAS4
CLTB
SUPT7L
SLC4A1AP
LUC7L2
FMC1-LUC7L2
RBBP9
SLC24A1
ZMPSTE24
TRMT44
DCP1A
NDUFS7
DNAJC25-GNG10
DNAJC25
TTLL12
NME1
SLC33A1
EIF2D
INTS12
GSTCD
TACO1
STX18
TEFM
RPL37
ZSCAN31
MNAT1
CALCRL
LSG1
POLR3B
STX16
RPS14
DRG2
SKP2
LMBRD2
ZNF829
ZNF568
GTF3C3
HMGB1
TMEM41A
GTF2H4
ALG10B
DNAJB12
METTL25
CCDC59
NEMF
KDM3A
STC1
UTP3
PPIP5K2
NOTCH2NLC
DCAF10
GTF2H2
INTS5
PAFAH2
SAR1B
MOB4
WDR11
MTR
RTTN
ATP5MC2
TOP3B
VTA1
NMBR
NOTCH2NLB
NOTCH2NLA
USPL1
REXO4
DPY19L4
GABPB2
TRMT5
SLC38A6
RAD54L2
KANSL3
STAT3
SLC25A51
RERE
TFPT
PRPF31
IPO4
KDM1A
FMC1
ATF7IP2
MTERF4
PUM1
ILF2
TOR1AIP1
ATF7IP
TTC26
EIF3F
DISP1
MRPL44
NDUFB3
FAM126B
ZNF408
ARHGAP1
SLC44A1
TATDN3
NSL1
MRPS31
GTF2H2C_2
GTF2H2C
EPRS1
CDK5RAP1
INO80C
NR1H3
ACP2
TTI2
PPP6R1
MRPL40
HIRA
CFAP298-TCP10L
CFAP298
ZNF391
POLR2J3
FAM227B
DTWD1
MRPL21
IGHMBP2
MRPL30
MITD1
MRPS18C
HELQ
PSMF1
COX7A2
OPA1
NUP54
WDR36
SNAP47
JMJD4
CCDC97
RCAN1
KMT2A
SNRPB
CCNC
TBL1X
PPIG
MRPL48
SMG5
GFM2
TMEM43
CHCHD4
C8orf37
GLIPR1L2
COPS7B
SMG8
BMS1
ATR
USP30
NBPF1
PDCD6IP
XKR7
BRF2
MRPL1
RNF187
TDP2
ACOT13
SNIP1
CYP17A1
GALK2
CLK4
BNIP1
KLHL20
AARS2
ALKBH3
TSFM
FRG1
EIF1AD
BANF1
FAM133B
N4BP2L2
ZSCAN25
ZNF292
TRUB2
COQ4
MTBP
MRPL13
PLEKHM3
SF3B6
FAM228B
CDC73
COPS4
FAM160B1
ATP1A1
NSFL1C
DUS1L
RUVBL1
TUT1
GTPBP3
TTLL1
DDX18
SCNM1
LYSMD1
SDHAF3
TMED1
CENPV
CCDC88A
RGPD1
SMU1
DHX16
TGFBR2
FAM98B
ZSCAN30
C10orf88
TPK1
LRP6
COA6
TMEM222
VPS13B
NECAP2
RPL5
CLTC
SNX17
EIF2B4
RBM45
CEP85L
MRPS23
NOP16
HIGD2A
SCAND1
LOC102724265
CPPED1
ISY1-RAB43
ISY1
C17orf75
ZSCAN22
WDR55
EIF3E
PUS10
PEX13
R3HCC1
PIH1D2
NKAPD1
TMEM101
PDE7B
SUGCT
MPLKIP
ACTL8
DPP9
COPS2
HSPE1-MOB4
HSPE1
HSPD1
ALG10
SNRPD1
TMA16
ATG4C
METAP1D
DHTKD1
MRPS14
SEC13
BCAR3
ALG14
FGFBP3
RPS15
GRPEL2
SREK1IP1
CWC27
CBWD5
TTC4
CCNI
HEATR1
CBWD3
HAX1
POLDIP3
SMIM13
ANK1
NUP107
CHD1L
PRPF18
RNF6
PHIP
DNAJC24
DCDC1
NBN
METTL9
CEP120
DRAP1
C11orf68
CLASP2
RPS3A
GNAL
SNRPB2
HUS1
MAN2C1
INO80B
NDUFS3
KBTBD4
B4GALT7
SOD2
RGPD2
DDX1
CCDC107
MED18
THOC2
RPS20
MRPL3
TSPAN10
NPLOC4
SMARCD2
PES1
APRT
SMG7
CRKL
ZNF165
TMEM259
ZBTB45
SLC35B1
SRP9
PRELID3B
GARS1
AASDH
CASC3
PRKAB2
PDGFD
MEMO1
ZBTB40
CASS4
THOC5
DNAJC6
RNF125
IRF9
KRR1
POLG
POLR3E
ZNF540
TPR
ODR4
C18orf21
STOML2
NDUFA4
LARS2
SLC45A4
CUL5
UBOX5
FASTKD5
RIF1
ADRM1
SEC23B
RPS26
NOL12
TMBIM6
MTOR
NMNAT1
LZIC
CLUAP1
ZCCHC4
VIRMA
SESN1
HLA-E
ATP5MC3
MRPS33
TIGD1
EIF4E2
SRRM3
TMEM132A
ZNF609
CBWD6
MAPK1IP1L
CCDC150
CCAR2
UIMC1
FAM234A
TRAF6
RAG1
CHMP7
CDIPT
TMEM68
TGS1
ANKRD54
MRPL16
MRPL39
RABGGTA
ABCA3
FAM13A
CTNNB1
EIF2B3
ATP10D
DCT
ZNF571
COG2
ZNF770
PSMD3
CGGBP1
RAB18
ZMYM5
RMND1
KMT2D
ARMT1
POLR1F
CCDC174
BANP
DDX41
DNAJC11
SACM1L
FAM207A
CFAP20
EEA1
NCBP3
ERCC6L2
ADPRS
WTAP
RPL38
ZNF76
SNRPE
MMACHC