ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

CCDC200
MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
BSDC1
KCNJ15
SUPT7L
SLC4A1AP
WDR74
KDM3A
ZNF408
ARHGAP1
ATF7IP
TARS2
RPL27
GABPB2
RCAN1
SF3A3
COL4A6
COL4A5
COX16
MTRNR2L2
PPP6R1
MMACHC
SMG5
NDUFB3
FAM126B
COX7A2
CDIPT
NME1
PIH1D2
NKAPD1
COPS4
AURKAIP1
INTS5
MTF2
RPS26
HDAC8
TUT1
PRPSAP1
CLPTM1
RBBP5
LY6K
DNAJC16
MED18
RPS7
AHCYL1
TBL1X
SMG8
RABGAP1
EIF2S1
ATP6V1D
DHX16
ZNF806
ARHGAP39
CALCRL
STAT3
KDM5C
SLFN12
INO80B
SLC33A1
SELENOH
STC1
SLC9A1
TCTEX1D4
BTBD19
ZNF226
HAX1
RFFL
AIFM1
UBB
PAXBP1
CCNI
EIF3F
GPC6
CELF1
CDK12
RGPD1
RGPD2
GTPBP3
ZNF540
ZNF571
ZDHHC6
VTI1A
WDR83OS
WDR83
RMND1
ARMT1
MTBP
MRPL13
KDM1A
IFTAP
STK40
DUSP6
GTF2H4
PSMB7
ABRACL
THG1L
ARMCX5-GPRASP2
ARMCX5
IGFL4
SSBP1
ZMPSTE24
PPIL3
NIF3L1
ILF2
PACSIN2
PDE4DIP
RCAN2
LRIG2
RPH3AL
PPIP5K2
REXO4
PLEKHG1
ZNF331
RNF125
ZNF585B
ALG14
UTP3
TTC26
ISY1-RAB43
ISY1
NOL12
RPL38
MICALL1
DNAJC25-GNG10
DNAJC25
CCDC174
AP1G1
MRPL11
TFB1M
IL17F
ZNF56
DDX41
MRPS23
VTA1
NMBR
EFHD1
TRIM5
YWHAQ
RAD51AP1
C12orf4
KAZN
C1orf174
EIF5A
GBA
DNAJB12
RPA2
ZNF383
ZNF790
UQCRC2
TMEM242
SYAP1
PPRC1
CSNK1E
UFC1
ZNF165
B4GALT3
ZW10
FAM124B
MRPL30
MITD1
RPL11
PIKFYVE
C3AR1
NEMF
TMEM101
ARMC1
TRMO
PES1
YPEL3
TIMM10
TRUB2
COQ4
TOMM40
LRP6
FRRS1
CASP10
BNIP1
SCARB1
IFI6
UBE3B
KCTD10
RNF207
TBC1D19
RBM25
FAAP20
MED11
TFPT
PRPF31
SNX17
EIF2B4
PEX3
ADAT2
GTF3C3
DPP9
PDE12
HEATR1
GPATCH3
ZRANB2
ADRA1A
MAST2
LSG1
SLC25A53
RAB30
NR1H3
ACP2
INKA2
DDX20
ZNF461
SIN3B
KANSL3
TNPO3
PLK3
VPS52
RPS18
POLR3A
SLC35B1
SNRPB
RERE
PSMD3
YJU2
IPO4
UFD1
CDC45
ZNF585A
PAFAH2
MTR
SLC39A9
ERH
PCNP
MDM4
RABGAP1L
EIF3E
HEMK1
TIMM22
ALG10B
RUVBL1
POLR1H
ZNF510
ZNF335
CDK5RAP1
DDX18
CHMP7
ANKRD13C
MAN1C1
COMMD2
TEFM
EPRS1
PIGL
CCNC
TM2D1
SPHK2
RPL18
SULT1C2
NEURL4
SNRPD1
CEP120
CLASP2
PREPL
CAMKMT
GYPC
ATP5MC2
CCDC97
FRA10AC1
COIL
TTC14
NOL8
CENPP
ZNF221
TTI2
AASDH
PHF5A
ACO2
ZBTB40
POLG
FBXW7
SMIM12
DDX42
CCDC47
DHX8
FAF1
TMEM259
NEK2
KAT7
TTC32
LURAP1
PSMB6
SEC16B
DMAP1
USO1
NUF2
MED23
SESN1
CEP57L1
AKR1A1
DYNLRB2
SLITRK5
SLC1A3
ACBD4
IPO13
RPL26
SH2D5
RBL1
CREM
TIMM9
KIAA0586
TBC1D9
NBPF1
BANP
SRSF1
CMSS1
OAZ3
BAIAP2
ZNF2
KCTD20
TUFT1
LYPLA2
SCP2
TRAPPC8
ZNF260
METTL25
CCDC59
MRPL1
PCBP2
ANKRD17
AAAS
PDSS2
GTF2B
GALM
INTS2
KIAA0319
TMEM128
LACTBL1
GLIPR1L2
ARL14EP
PEAK1
HMG20A
ZNF793
EFCAB14
WDR11
CCDC107
MRPS33
MRPS15
GOSR1
KDM8
JMJD1C
MOB4
NCOA7
KRR1
DBF4B
ZNF484
RTTN
SREK1IP1
CWC27
FDXACB1
C11orf1
HIRIP3
RPL37A
CLN3
UIMC1
CZIB
KIF2C
ZBTB45
NR1H2
RFXANK
BORCS8-MEF2B
BORCS8
TTLL12
C11orf49
CDK19
WDPCP
MDH1
AMD1
PHB2
PPIH
CDC5L
SUGP1
MAU2
UQCRH
LRRC41
SNIP1
OSBPL8
IRF9
PRRG2
NOSIP
ZBTB8OS
RBBP4
C19orf48
AJUBA
EIF3D
SH2B1
INTS4
DNAJB4
MRPL45
TM9SF4
FUBP1
SUGCT
MPLKIP
GABARAPL1
NRDE2
NME7
BLZF1
BRF2
ATG4C
SF3A1
CCDC157
WDR36
ZSCAN30
PDE7B
SMARCD1
LIMA1
UTP11
CORO2A
TNFAIP1
IFT20
INO80C
CYB5R4
RSPH3
COASY
TMEM30A
PRKCI
MTRNR2L10
GABPA
ATP5PF
TRMT1
MRPS18C
HELQ
NOP16
HIGD2A
ABCD2
GPX1
ZSCAN4
TPK1
CSTF2T
PSMD9
HPD
SLC35A4
APBB3
CES3
MED16
DMAC2
SF3B5
ZNF302
TIMM50
WASF2
TBX18
CALCB
MNAT1
STARD10
ZNF350
DNM2
ATP5MC3
LMNTD1
SCNM1
LYSMD1
ZNHIT3
CHST4
ETFBKMT
UBQLN4
LAMTOR2
GFM2
HAUS4
TSFM
SOD2
DCT
WTAP
NEK4
SIRT4
POC1B-GALNT4
POC1B
WDR5B
FBXW10
C8orf37
MVB12A
TMEM41B
ADPRS
AAR2
CYB561D1
KXD1
CRADD
MBNL2
SCYL3
NOL11
UBQLN1
FOXO3B
DCTPP1
SLC25A44
NUP54
CGGBP1
C3orf38
PRKCSH
CCDC151
RC3H2
ACTR6
BPNT1
TMBIM1
RUFY3
NDUFS7
TMED1
ZNF570
ZNF569
EIF4A2
CEP162
RBM8A
SFSWAP
SRFBP1
FGD4
HBS1L
SRRM1
S100A13
KIF20A
BRD8
NHS
S100A1
BORCS7
ZNF48
PLPP5
RCC1
USF1
CPN2
TCIM
RPS29
FAM13A
STAT6
TRMT11
SLC7A11
NRL
DCAF11
ZMYM6
CCDC130
CFAP298-TCP10L
CFAP298
CCNT1
RPL22
POGLUT3
GSTA4
QRICH1
SLC35A1
TAF15
ZFC3H1
THAP2
MZT1
BORA
CAND1
MRPL48
NECAP2
WDR55
ZNF613
SLC35E2A
SULT2A1
SEPHS2
SLC30A6
ZNF791
ZNF490
LTA4H
GTPBP2
OBSL1
INHA
SLC39A6
ELP2
TAF13
INSYN2B
PSME3
FNTB
HEXIM1
ATAD5
SNU13
CD2BP2
RAI14
SNX12
RPL7L1
AARSD1
CNPY2
GCNT2
FCRLA
CDRT1
THOC5
GPN3
FAM216A
LZTR1
RPS12
YARS2
SIAH1
UBR2
TXN2
ENDOV
GOSR2
TBC1D22A
COPS7A
NPAS4
RPS3A
RIF1
ADRM1
LRRC29
PLS1
CREBL2
NECAP1
CACTIN
MSANTD3
PMF1-BGLAP
PMF1
MTOR
ZNF300
ZNF566
ZNF573
HTR3A
C4orf51
DSTYK
DRG2
GORASP2
U2SURP
ACBD5
XPNPEP3
ST13
POLR2J3
DDX46
HAUS6
LRP10
GPX8
ELSPBP1
TTC39A
RTCB
PUS10
PEX13
RWDD1
CALM2
DEDD
SLC18B1
PIK3CB
CDCA3
ARHGEF10L
MAIP1
DNAJC11
TAS1R1
NOL9
DYNC1I2
SRSF4
MAP3K7
RPS27A
CLHC1
ARHGAP9
MARS1
TATDN3
NSL1
GTF3C5
PLEKHG2
DYNC2I2
NXT2
HMGB1
USPL1
CFAP20
C2CD5
MEGF8
DHRS13
YTHDF2
ADGRL1
GABARAP
RPAIN
NUP88
ZSCAN22
SMG7
UTP25
TENT2
PNISR
CLCN3
PSMD8
TPGS1
RUFY4
ZNF175
PHF12
SH2D3C
GNAL
UBOX5
FASTKD5
RPL29
ATP2C1
TRIM46
KRTCAP2
TTC5
AMPD3
NOLC1
FNIP2
LUC7L2
FMC1-LUC7L2
FMC1
BAG6
APOM
CLASP1
TXNDC17
KIAA0753
ADIPOR1
SIRT3
PSMD13
PKDCC
OSGEPL1
NSUN3
DHFR2
POC5
ERAL1
GRWD1
ZNF623
ZNF391
SRP54
CUL2
CHD8
ELAC2
ZNF416
OS9
SNRPG
SLC35E4
RBM45
TNFRSF19
CCDC90B
ARHGAP24
SULT1C4
SNX3
PUM3
EFTUD2
CCDC103
C6orf118
FUCA1
MTREX
DHX29
POLDIP3
TMBIM6
SLITRK1
MRPL27
EME1
ZNF180
TACO1
SF3B6
FAM228B
PRPF18
RANBP2
BCL2L13
ATP6V0D1
THRAP3
ACP3
HACD2
TTC31
CCDC142
ZFYVE26
SEMA5B
CEP85L
ZKSCAN2
NSUN4
CCNG2
ORAI3
CCDC43
CD320
ZFP30
COPS7B
CCAR2
MTRNR2L9
NIP7
COG8
PDCD6
EYA3
NOCT
PDE6D
GRN
FAM135A
GTSE1
SH3BP4
GALK2
COPS2
FAM234A
MRPL19
UBE2Q1
ABCF2-H2BE1
ABCF2
COA3
CNTD1
AP2S1
POLD4
EIF1AD
BANF1
CRKL
CLUAP1
RNF220
TMEM69
SLC35D1
TIPRL
SCAND1
NUP107
DCP1B
FKBP8
CABIN1
SLC35F2
MRPL24
PRCC
SLC39A11
SBNO1
MGRN1
GPRC5A
CLTC
TMEM167B
DYRK4
CENPF
TBCB
POLR2I
TBC1D2
NKX3-2
ZNF829
ZNF568
COA6
ZNF286A
ACVR1
MRPL54
APBA3
HECTD3
NUP35
PIP4P1
ILF3
RPL18A
MPDU1
LOC100996842
IFIT3
CALHM5
TRMT5
SLC38A6
ANXA11
APOL2
NKAP
ALDOA
RRBP1
TMEM63C
LOC644090
LIN54
DNAL1
ACSL1
STX12
ARL14EPL
F2RL2
MAN2C1
METTL18
C1orf112
VPS45
LMAN2
CSRNP3
SYCP2L
RIOK2
CUL3
TSR1
SGSM2
RHNO1
FOXM1
TRIP4
C18orf21
MAGOH
ZNF582
ZNF529
DCLRE1C
PYROXD2
ZNF700
STRIP1
TBC1D1
TMX1
TRMT112
PRDX5
DNAJA3
PRSS23
TMEM102
CELF3
DNAJC12
KLKB1
NGDN
HIBCH
CMPK1
ERLIN1
MAD2L1BP
RFC1
PSMB5
MDH1B
FASTKD2
PPIG
HSPE1-MOB4
HSPE1
HSPD1
SENP1
PFKM
RBMS3
USP9X
CHM
FIG4
AK9
ZSCAN23
HOXB13
ADGRF2
SPIDR
BTRC
PTPA
CRAT
BRCA1
SUPV3L1
NFE2L1
MTIF2
CRNKL1
CFAP61
CBR1
CACYBP
EFR3B
USP48
OXA1L
ZNF565
ZNF146
DDOST
KLRC2
VIRMA
SPAG9
TOMM22
MPHOSPH10
MCEE
UBE2Z
TAF12
ING4
C11orf65
YLPM1
SCN11A
NDUFA9
AKAP3
NAPA
WDR48
ZNF14
ZBTB20
PNO1
THAP3
PIP5KL1
ADGRF4
VPS13B
FGFBP3
PHIP
SNRPD3
GUCD1
RGL2
PMVK
ZNF24
PCNX3
MAP3K11
MPC2
DCAF6
COQ10B
PKD1L2
SNAP47
JMJD4
NAT10
GPR137
TRIP12
FBXO36
IWS1
AGPAT4
ZDHHC12
NUCB1
EPHA7
EEF2K
PKIG
CDK7
PDK2
FLRT3
TNFRSF9
STX18
SDHAF3
RPL5
ATG101
RPS19
HIF1AN
NUP205
TAF5
DDX21
TRIM2
ATAD3A
PIH1D1
EXOSC5
BCKDHA
NOL6
CPPED1
METTL26
CSTF1
AURKA
RAB3GAP2
MFN2
PDE4B
MTRNR2L6
N4BP2L2
TPR
ODR4
PPOX
EXO5
NUCKS1
RANGAP1
KCTD9
CDCA2
MBNL1
NAA38
OGA
CYB5D1
PAK1IP1
C6orf52