ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
ITGB3BP
EFCAB7
CCDC200
WDR74
YPEL3
CBX1
RABGAP1
ZFP30
DISP1
STC1
GBA
ZNF829
ZNF568
RABGAP1L
PDE11A
MAPRE2
DNAJC25-GNG10
DNAJC25
ZNF623
MTF2
SAMD4B
SF3A3
MTRNR2L8
DUSP6
RBBP5
YWHAQ
COMMD2
RNF187
COX16
UTP3
CLTB
NUF2
TMEM132A
ZNF292
ZSCAN22
TBC1D19
ATP5MC2
RPS7
TRMT5
SLC38A6
ZNF566
SOD2
WTAP
GTF2H4
TOMM20
TMEM41A
SSBP1
RWDD1
CCDC174
TSFM
TARS2
ATP1A1
HTR5A
RNF125
SELENOH
NEMF
MAN2A1
EPHA3
SLC24A1
RERE
CAT
TTI2
CEP85L
ZNF570
ZNF569
ZNF117
ATF7IP2
MED23
TRIP4
CWC25
PNMA2
SLC45A4
DMAP1
MRPL1
ZNF790
FBXW7
PEX3
ADAT2
NDUFB3
FAM126B
GLIPR1L2
MNAT1
GTF2H2C_2
GTF2H2C
TTLL1
TRIM41
BRAP
ACAD10
LRCOL1
NDUFS7
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
ARHGAP39
MTR
PDCD6IP
FAM13A
SNRPE
CDC5L
PDE1A
MMACHC
CCDC130
MAIP1
JMJD1C
TDP2
ACOT13
SMG7
RAB18
RAB30
PAFAH2
BANP
ZNF226
TMEM242
TTC32
HDAC2
TTC26
FGFBP3
PPIH
RBBP9
SIKE1
FRA10AC1
PAXBP1
DNAJB12
APRT
PPRC1
SKP2
LMBRD2
MRPL48
NME1
TARS3
FAIM
ZMPSTE24
PDGFD
RAB5IF
THAP10
LRRC49
RUNDC3B
TMEM38A
SMIM7
METTL25
CCDC59
KDM3A
STAT3
MRPS18C
HELQ
EIF2D
NEU1
SAR1B
RTTN
CHCHD6
PNPO
LURAP1
TACO1
REEP3
HAX1
IARS1
SLC33A1
BMS1
CCDC107
GABPB2
TFPT
PRPF31
RCAN1
SLC35E3
ZNF391
MRPS14
SMIM13
PARP2
RANBP2
SLITRK5
MRPS23
ZNF540
ZNF571
ZNF350
HEXA
POLR3B
GALK2
COPS2
TRMO
PARK7
ATP6V0E2
NUP155
ZNF687
RPL27
POLDIP3
REXO4
TMEM43
CHCHD4
RBM45
RPS3A
CALCRL
PUS10
PEX13
ZNF165
STOML2
LRRC29
RPA2
GOSR1
ZNF354A
SYT1
BAIAP2
KANSL3
ZNF300
MYO1H
WDR11
METAP1D
CDK19
AMD1
DSTYK
NECAP2
PIH1D2
NKAPD1
RIF1
TTLL12
FAM199X
SLC3A2
SYNPO2
TMEM259
CCNL1
ZNF527
NRL
DCAF11
DCP1A
MOB4
NCOA7
ZBTB8OS
RBBP4
PKIB
ABHD10
SERINC1
AURKAIP1
TEFM
CUL5
SULT1C2
MTRNR2L2
EPRS1
NUP54
INTS2
RPS13
CLPTM1
SLC35B4
CDC73
POLG
TIGD1
EIF4E2
RPS29
CCNC
RPL5
ISY1-RAB43
ISY1
FAM174A
DCLRE1B
AP4B1
BORCS7
VPS45
PPIP5K2
COX7A2
GTPBP3
NUP107
ANO8
STX16
MRPL30
MITD1
SLC35A3
SNRPD1
PIGC
ECHDC1
LUC7L2
FMC1-LUC7L2
FMC1
ZNF791
ZNF490
PCDH15
MRPL40
HIRA
NOP16
HIGD2A
SLC25A16
KRR1
DYNLRB2
TOGARAM1
KLHL28
MRS2
FDPS
SLTM
NBPF1
LRP6
DCT
EFHD1
SF3B5
COPS4
MRPS33
N6AMT1
TRIM46
KRTCAP2
TAF12
RPL37
RPS14
DRG2
MIER1
DNAI4
EXO1
PPIG
GSTA4
NOL12
NOS3
POLR1F
STXBP3
ZNF793
STX18
EIF3F
CCDC97
UBOX5
FASTKD5
ATG5
OAZ3
LAMTOR5
OSGEP
APEX1
WDR36
ZSCAN30
METTL9
ZNF383
RPS12
ZNF56
P2RX6
LRRC59
CDKL2
CDK5RAP1
PRDM1
CSNK1E
TGFBR2
TSTD3
FOXO3B
SLC30A5
TBL1X
NMRAL1
HMOX2
HIGD2B
BBS4
SRP54
ERMARD
ACTRT2
ATF7IP
DCP1B
POLR3G
MBLAC2
SUPT3H
CHEK1
SNX14
ALG10
ALG14
ZNF561
GPN2
UBR2
DAXX
ZSCAN31
TPR
ODR4
ALDH9A1
MTMR9
CLN5
DPYSL3
CCDC120
DHX16
CPPED1
DDX41
GABPA
ATP5PF
PPOX
ZNF846
TRDMT1
HBS1L
NUP205
C3orf14
BRF2
ATG4C
GRPEL2
TMEM106B
CCDC124
SLC2A4
H2BU1
H2AW
INPP4B
TPK1
PHIP
SRP9
GPR137
FOXP1
DNAJC19
WBP11
C12orf60
C8orf37
CRNKL1
CFAP61
RIMBP3C
RIMBP3B
ZNF335
SLC17A5
MRPL24
CHD1
FAAH
SNIP1
DHTKD1
PLS1
GTF2B
TRMT11
RSL24D1
PNISR
NMT2
ASCC1
ANAPC16
GOLPH3L
SUPT7L
SLC4A1AP
PDE4DIP
ZSCAN25
TMEM101
INO80B
GORASP2
MTIF2
LOC102724265
HEATR1
DNAJC24
DCDC1
PES1
IRF9
SEC23B
TMBIM4
ANKRD36B
TAF13
DUSP12
CEP85
HMGB1
USPL1
TNPO3
PLCH1
SLC25A21
EIF3D
BAG6
APOM
ABCB10
RUFY4
VTA1
NMBR
UCHL3
COMMD6
ARL14EP
TMEM116
ERP29
INSYN2B
ZNF285
CALD1
RAD54L2
IPO4
ZNF408
ARHGAP1
WDR55
ABCA3
COG2
UBE3B
KCTD10
DEDD
MICU2
KLHL32
CYCS
JOSD1
ATG101
MFSD8
HECTD1
ABHD18
UBE2L3
VPS25
ZNF501
TXN2
RNF144B
CFAP20
OSGEPL1
ZCWPW2
AZI2
FBXO28
HIPK1
MRPL45
ZNF589
PARPBP
NUP37
IPO7
EXOSC10
OPA1
TMEM222
RNF6
FBXO22
SLC25A53
PSMD11
PACSIN2
MYO18A
MED11
CFAP410
PGM1
AQP4
GPAM
DDX46
CYB5R4
PSMD6
NUDT15
WDHD1
SOCS4
IST1
MRPL53
FBXL19
SMPDL3A
POLR2J3
BTD
SUGCT
MPLKIP
MAST2
ACBD6
GTPBP10
TM2D1
TNFRSF19
UFL1
HACL1
RIOK1
CAGE1
NLGN1
C15orf61
INO80C
ALKBH3
SF3B6
FAM228B
DDX18
MED18
RPS26
CSDE1
IRAK1BP1
TAF3
DCAF8
ABCB8
ATL1
CORO2B
MZT1
BORA
INTS5
CCNI
RPTOR
C2CD5
PPP1R11
ZDHHC6
VTI1A
SIRT4
RFXANK
BORCS8-MEF2B
BORCS8
VPS52
RPS18
HMGCR
ESCO1
LCA5
GPR89B
HMGCLL1
RAB37
ACOX3
TRMT44
ALG10B
TOR1AIP1
MRPS31
ZNF518A
WARS2
EIF2S1
ATP6V1D
BOD1L1
CREBL2
VPS26C
GPATCH3
NDUFA12
LRRC10B
PLD4
TMEM59
TCEANC2
SULF1
SNX17
EIF2B4
ZNF582
PAAF1
COA4
ZNF2
RIMBP3
WDR62
THAP8
SNAP47
JMJD4
AASDH
FAM234A
MTRES1
THG1L
COL4A6
COL4A5
CIZ1
PDSS2
IPP
DRG1
PABPN1
ZNF3
SAYSD1
SPATA7
C11orf65
MMUT
CENPQ
C6orf118
PPP1R9A
ZNF345
GFM2
TMA16
TMBIM6
BCKDHB
HMGN4
KBTBD3
AASDHPPT
PEAK1
HMG20A
H4C14
SULT1C4
ASCC3
GPATCH4
DPY19L4
MRPL21
IGHMBP2
SMU1
R3HCC1
ZKSCAN2
ZNF461
SPAG9
RALBP1
ZNF529
TYW3
CRYZ
ZKSCAN8
ARHGAP19
NUDT5
CDC123
PCDH9
DYNC2LI1
SUMF1
CBWD5
CBWD3
PPIL3
NIF3L1
LTA4H
IPO13
ZNF331
FDXACB1
C11orf1
ZNF839
CCNT1
TMEM33
TRUB2
COQ4
VPS13B
C15orf40
CYB561A3
TMEM138
FITM2
FBXL17
ST6GALNAC2
GOT2
NEK2
PPWD1
CENPK
EIF2S3
CNIH3
AARS2
FAM133B
EIF3E
FANCI
CCR7
PCNA
RBM34
IFTAP
BBS5
MRPL3
PIKFYVE
TIPARP
DNAJC16
MRPS16
MDM4
MSL2
FBXO38
NOLC1
ZNF33B
DPH6
LMO7
TXNDC12
BTF3L4
PUM1
H4C8
COX18
FKBP7
ETFDH
C4orf46
MRPL54
APBA3
PPP4R3B
THRAP3
C2orf42
GAR1
EDEM3
TSG101
NDUFS3
KBTBD4
NDUFC2-KCTD14
NDUFC2
PSMA1
UFC1
RNF207
GCLM
RCAN2
VPS33A
CUL2
SNX5
MGME1
CTH
MDP1
GFER
CNOT2
IMPACT
MAP2K7
GNE
DUS3L
PPM1J
SHC3
SMG5
ZBTB45
DHRS13
SRSF7
TMEM69
LOC100421372
HSPA14
CDNF
NDUFB2
RNF182
MRPL42
TTC37
ARSK
NAT10
ROBO3
DUS2
DDX28
DNAI3
ZNF362
SYMPK
DPP9
HSPE1-MOB4
HSPE1
HSPD1
PSMD3
OGT
ATP5MF-PTCD1
ATP5MF
TRIM59
CMSS1
FAM71E1
EMC10
CNTRL
BCL2L13
NSUN4
C5
HLCS
ZNF23
KIF15
KIAA1143
LYRM2
PLAC8
ZNF184
RCCD1
TFIP11
DCUN1D5
HNRNPR
TXLNG
PHTF1
C18orf21
GCFC2
CCDC77
C1orf53
METTL1
EEF1AKMT3
CATSPERE
ARHGEF4
KDM1A
SLC39A6
ELP2
UQCC1
WDR61
RBM7
C11orf71
ZNF772
COX14
TERF2IP
KARS1
LTN1
PPA2
SMAP2
SRSF11
LRRC40
EXO5
NUP133
SETDB1
AKR1B1
APC
ZBTB8B
COPS7B
PTPN4
DYNC1I2
SRRM1
DIS3
GLIS2
KPNA6
PLPBP
POLR1B
SORBS2
PANK1
RHOBTB1
MTERF4
TTC4
TTC14
FNTB
CZIB
CMC1
H4C15
VWDE
STEAP1
TTC23L
PYCR2
GARS1
TIGD6
HMGXB3
ANKRD13C
TNFRSF10D
DNAH7
CDK7
PGD
NELFA
ACY1
SCNM1
LYSMD1
PRPF18
YTHDC2
AP3B1
LRIG2
NDFIP2
ZNF432
PLCXD2
ABCF2-H2BE1
ABCF2
POT1
RPL24
GTF2H2
TRMT61B
SEC31A
SPATA5
NUDT6
AAAS
DNAJC21
GRAMD1C
THAP9
KIFC1
EIF4G2
RLF
FANCD2
SDCCAG8
CEP170
ANO5
RBBP6
NUP35
DDX21
ZFP14
SH3BP2
HSCB
CHEK2
TPRA1
CALR3
C19orf44
PHKG2
DGKB
NMNAT1
LZIC
DNAJC11
GDAP1
MEX3C
AGBL3
TIAL1
RAB3GAP2
MFSD4B
MSANTD3
NDUFAF6
ATP10D
CEP350
IL1RAP
IFNAR1
CRTAP
ABCD2
RPLP2
METTL16
N4BP2L2
NEK7
TSGA10
FAF1
TMCO1
PIGO
C6orf226
MRPL27
EME1
PSMC4
NFU1
GTF3C6
ZNF471
TATDN3
NSL1
BCAR3
RSAD1
MRPL19
ZNF302
CLCN3
FASTKD1
LSM6
DSCC1
OTUD4
ILF2
SACM1L
SPEF2
STAT6
ECI1
CFAP69
USP4
TOMM40
ACAT1
GCA
TXLNA
SDHAF1
SMG8
ZNHIT6
GEMIN5
DYRK4
NGDN
RPS6
CLGN
KLHL2
ATL3
TMEM19
ST8SIA1
SNRNP70
PAFAH1B2
CCDC146
SPC24
GJB7
INTS12
GSTCD
SREK1IP1
CWC27
WDPCP
MDH1
IPPK
ARIH1
AARSD1
SLC25A19
MRPS30
COQ10A
DNAJC9
BCAS2
ACP6
CLVS2
C10orf88
NDUFA4
MAGOH
MGST3
UTP25
PROS1
EEF1AKNMT
MAGOHB
ETNK1
MICAL3
TOE1
MUTYH
RAMAC
C2orf73
RPL21
ZSWIM2
PPP6R1
ATP5F1B
EIF3M
ZNF260
COASY
RMDN2
MBD4
IFT122
PMVK
RRP9
PARP3