ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2059876 | BJAB
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◣ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
YWHAQ
CCDC200
CENPV
MTRNR2L8
SAMD4B
RBBP9
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FEM1C
MTRNR2L2
NSFL1C
YPEL3
ZNF117
MEMO1
CEP72
TTC32
RABGAP1
NLRC4
RPS29
LSG1
APRT
ZFP30
KMT2A
SUPT7L
SLC4A1AP
PSMF1
TMEM130
ITGB3BP
EFCAB7
SEC23B
SLC25A51
POLR2J3
NARS1
CCDC88A
CCDC130
PGBD2
MAD1L1
PUM1
DEFB124
REM1
RCOR3
ZNF3
RPS7
LUC7L2
FMC1-LUC7L2
FMC1
FAM160B1
ACTL8
PAXBP1
GSPT1
KDM3A
ARMH3
TOR1AIP1
TMEM43
CHCHD4
OGFOD3
HEXD
RPL27
BRWD1
MAN2A1
MTF2
GBA
EIF4A2
NUF2
LOC101928841
SRXN1
MAIP1
ATAD2
ZNF562
PRKAR1B
RPS14
WDR43
FAM133B
TBC1D22A
HUS1
SLC24A1
RTTN
ABCB4
LZTR1
CYP51A1
HNRNPA1L2
SLC30A6
MRPL40
HIRA
VPS13B
INTS12
GSTCD
MAML1
MTBP
MRPL13
RERE
PET117
KAT14
PMFBP1
SPAST
YME1L1
MASTL
NPAS4
MED4
GTF2H2
MRPL19
CBX1
RASSF2
AURKAIP1
SNRPB2
EIF1AD
BANF1
NDUFA4
METAP1D
BIN2
FRA10AC1
PPIP5K2
SMIM13
TMEM65
MKNK1
TRMT2A
RANBP1
MTIF2
SSBP1
EPRS1
NBN
METTL25
CCDC59
SNAP47
JMJD4
SLC33A1
KDM1A
GTF2H4
SPHK2
RPL18
RB1
FAM98A
DCP1A
SRRT
ATR
COMMD2
NUDCD3
CRKL
SELENOH
RCBTB2
PTCD1
CPSF4
MRPL44
UFD1
CDC45
SNAP29
PI4KA
HM13
CHD1L
PRKAB2
COA6
WDR55
NCBP3
SNRPB
SF3B6
FAM228B
RPS15
ADAM22
PTPRCAP
STX18
SUGT1
RINT1
CCDC150
NUP54
TSPAN10
NPLOC4
TGDS
HMGB1
USPL1
PPP1CC
HK1
DOK4
SNX16
TOX4
RAB2B
TBC1D19
DRAP1
C11orf68
DPY19L4
NOTCH1
DCT
LRRC37A3
WDFY1
IL21R
NBPF1
OPA1
SUGCT
MPLKIP
ZCCHC4
LRP6
HIBADH
TIPARP
YIPF4
BCL2L1
HSPE1-MOB4
HSPE1
HSPD1
PSMG1
GAPVD1
CFAP36
NME1
ZMPSTE24
UBB
CLTC
ANKEF1
AP1G1
CCDC97
NDUFS7
GFI1B
TSC1
IBA57
ATXN2
SDHAF3
FAM98B
SPRYD7
NAPEPLD
SLC9A3R1
CLUL1
TRIP4
ZNF408
ARHGAP1
CRNKL1
CFAP61
KANSL3
KLHL22
NDUFB3
FAM126B
ZZEF1
CYB5D2
PPP5D1
CALM3
ZNF292
MCM7
AP4M1
MICU2
GCFC2
HARS2
HARS1
SLC29A2
SLC41A3
TBC1D13
TRIP12
FBXO36
DCXR
RTN4R
WDR74
PRPSAP1
NUDT15
PEX3
ADAT2
MTRNR2L9
DYNC1LI2
DCAF10
MCUR1
COPS7B
RABGGTA
RPL37
FZD1
PIH1D2
NKAPD1
TMEM191C
ZNF25
PCYT1A
DDX1
RNF6
SPDYE14
SPDYE10P
CASTOR2
IPO4
LDB3
TBCD
TTLL12
TRMT61B
ZNF891
ZNF10
YDJC
RBBP5
FAM227B
DTWD1
CCDC71L
POLR3B
REXO4
GALK2
RUVBL1
COPS2
EEFSEC
DCTN4
MRPL48
TTLL1
SYPL1
ARL11
SLC7A11
BCAP29
EDC4
RABGAP1L
ALG10B
ZCWPW2
AZI2
TRAF6
RAG1
UBE3B
KCTD10
WWOX
GNB2
CBLL1
MRPS18C
HELQ
NSMCE4A
ZSCAN26
NCOA1
MS4A1
ARHGAP45
CCNG2
ZNF341
UBE2L3
CCNI
RAD54L2
FBXL13
ARMC10
FBXO11
C2CD4C
FAM170B
C8orf37
MIA3
EIF3E
BIRC6
SEPTIN7
SRRM3
LANCL2
MOB4
DHTKD1
IST1
NCF2
UCHL5
RO60
KDM5C
TNFAIP8L1
ZMIZ2
ATXN7L2
ING2
EMC8
COX4I1
CALM2
GTF2H2C_2
GTF2H2C
DSTYK
TFPT
PRPF31
UIMC1
NMNAT1
LZIC
TVP23B
KDM3B
UBE2D2
AP5S1
ZNF572
PCBP2
ZNF436
IFT22
CT45A10
MRPL58
VRK2
CRLS1
H3-3A
WDR36
MRPS23
GOLGA3
TENT4B
DRG2
INO80B
RPS26
REEP2
BLOC1S6
NAA35
VTA1
NMBR
UBOX5
FASTKD5
SUPT4H1
DESI2
TRA2A
INTS5
NCKAP1L
INO80C
RBL1
ZC3H6
SAYSD1
TMEM230
PLCB2
MNAT1
MRPL30
MITD1
ZSCAN25
ZER1
VPS50
HEPACAM2
LARS2
SYT7
DNAJB12
TRUB2
COQ4
ZCCHC8
RNF139
DOCK2
TFR2
PRKRIP1
STXBP2
NOP16
HIGD2A
PUS10
PEX13
USP32
TCTEX1D2
ETF1
FAM118A
GARS1
LOC100289561
UGCG
N6AMT1
ZNF789
C18orf21
DHRS12
SELENOI
ADGRF3
TRAM2
SOCS5
NEDD9
IRF5
DUS1L
SPINT2
KIZ
ANGEL1
UNC50
COA5
PSEN2
RPS20
CDK12
MAPKBP1
TMEM41A
SNIP1
AARS2
CAB39L
SETDB2-PHF11
SETDB2
MRPL42
GPR180
PHIP
NUDT7
GABPB2
MRPL38
NIP7
COG8
MTERF4
PDGFD
ACBD6
TRRAP
MRPS26
CLK4
PLK3
NFAT5
RABIF
SLC35A1
HS1BP3
STX16
SECISBP2L
CCS
CCDC87
ABHD12
BRF2
MRPL1
SRP9
ING3
BANK1
KPNA3
B4GALT7
MRPL3
ITGA4
RNASEH2C
CDC25C
FAM53C
RBM28
COPS8
ZNF337
ORC5
POLR1F
SLC39A13
ARL14EP
PTPRA
PBRM1
GNL3
ANKRD36
COMMD1
ADSS2
POLE4
SFSWAP
ASNS
SLC26A11
RRBP1
EIF2D
KRR1
RAD52
CUL2
GABPB1
FPR1
RPS6
POR
NOP56
PKM
SEM1
CYLD
SCAND1
DPP9
CFAP20
MGST3
TMEM101
CCNL1
SCP2
TAF3
MTX2
THAP7
TNPO3
FER
RTN4
IDH3B
USP15
VPS4A
SPATC1L
ABCB10
SMIM26
THAP11
KATNBL1
PAK2
NT5C3A
FAM234A
CAB39
C1GALT1
WDR70
CDCA7L
SMURF2
WWC1
TEFM
ZNF770
FBXO22
KIAA0895
ANLN
NAA20
COX7A2
TMEM168
DPY30
MMP26
PAFAH2
TUT1
CEP120
SMAD5
CEP57
FAM76B
HCFC2
GLT8D2
FAM110A
KMT2E
HAX1
PRMT5
CYB561D1
SF3A3
DDX18
COA1
ASPSCR1
RNF24
TTC4
EIF2B3
ZNF22
SLTM
LONP2
ABCC11
TLN1
CREB3
STRN
DNAJC27
RMND1
ARMT1
ANTKMT
VPS72
TEX261
TTC27
ZMYND15
CXCL16
SLX4IP
SKIL
POLR2J
CLK3
SCO1
ADPRM
GPER1
PIK3R5
AKAP10
COG2
NDUFA6
PSMG3
ZNF557
ITGB4
OR2L13
C1orf53
RBCK1
SGK3
DAG1
STAT3
ZNF335
WDR53
FBXO45
C7orf31
TMEM39B
CAPRIN2
PURA
DTX2
ALG10
TARS3
TIMM10
ATRN
TSC22D2
METTL9
TMEM68
TGS1
TIMM9
KIAA0586
CCZ1B
QRICH1
CAMK1D
FOXJ3
NOXA1
GTF2IRD2
GTF2IRD2B
ADNP
CCDC57
MBTPS1
ISY1-RAB43
ISY1
POLR2C
MCCC1
WDR5B
ERCC1
SMG8
TDP2
ACOT13
MRPL39
ANKRD40
CALM1
PCTP
GGA1
WDFY2
HPCAL1
TMEM222
KIAA0319
DTNBP1
DMAP1
SNAPC3
DOCK8
UBA5
ACAD11
IL17RA
CTDP1
POLR1D
LNX2
METTL26
ZNF23
LNPK
HERC4
CCPG1
C15orf65
SEC14L1
CFAP298-TCP10L
CFAP298
RSAD1
FBXO28
STARD4
RELA
DDX5
CEP95
RSRC1
CHMP1B
CIPC
SIRT1
DDX46
TMEM106B
BCL2L13
INAFM2
TFB2M
CNST
LCOR
C10orf88
RNF216
DGKZ
ARSG
IPO13
ZNF570
ZNF569
PPIL4
SCNM1
LYSMD1
RBSN
GMPS
STX8
CFAP52
WASHC2A
WDR17
PSMD12
STK35
NR3C1
ZNF609
FAM217B
PPP1R3D
CCNA2
PRPF18
ABLIM1
PIGO
YAE1
INSIG2
LSM5
AVL9
ABCA3
PLEKHM1
TTC21B
CCDC77
KDM5A
CBX8
MRPL16
TTC14
EFCAB2
CSRNP3
SDE2
RASSF6
DNAJC30
BUD23
OCEL1
LGALS9C
ZBTB45
CT45A7
CT45A6
CT45A3
GOLM2
TAF1B
TPX2
NR1H3
ACP2
RALBP1
RHOG
ITGB1BP1
CPSF3
CLPTM1
CYBC1
CDC73
TMEM167B
TRNAU1AP
LYPLAL1
TASP1
HEATR1
DHRS13
PRSS27
RCHY1
TLR4
DUSP6
TACO1
NOS3
TSGA10
MTMR6
PDCD6
C2orf15
TERF2
TRIB3
NR1H2
WDHD1
SOCS4
LIMS1
WASL
MED14
LRRC58
NSUN5
CRY2
MTOR
APEH
DENND4B
TATDN3
NSL1
UBE2Z
EIF2B5
SRCAP
LOC730183
CDC25B
QSOX2
OST4
CENPB
ADRM1
WDPCP
MDH1
ZSCAN12
AQR
HNRNPA0
COPS4
SEC22B
TRMT6
MCM8
ARMC8
RAB4B
TPR
ODR4
ELOVL1
ATP5MC3
RHOT2
GFM1
KPNA4
PPCDC
YKT6
GAA
SOD2
WTAP
SNRPD3
GUCD1
PUM3
CLTCL1
NAMPT
TARS2
SPNS1
MAP9
TACC1
ASPHD2
PLEKHG4
CREM
SPATA5
NUDT6
BUD13
KRAS
PPP1R35
SLC9A1
SPECC1
ANKRD36B
LAMP1
TJP3
HEATR5A
CLN6
INTS6
ANKRD50
TATDN1
NDUFB9
ATP8A1
CAPRIN1
PIGW
MYO19
QSOX1
FNDC3A
RIT1
AMN1
PARL
PCBD2
GTPBP8
THUMPD2
CDK1
LSM2
EGR1
CTNNB1
RPL29
TAB1
C7orf26
USP42
WDR11
SMG7
RAD51AP1
C12orf4
GOSR2
PDAP1
BUD31
GDI1
IQCH
AAGAB
XKR8
ITGAL
TMBIM4
PPP4R3B
CDK5RAP1
RPL26L1
APMAP
DEGS1
SACM1L
GPAM
INKA2
DDX20
RBM25
SLC25A32
DCAF13
TMEM18
TXNDC15
GCLC
GTF3C5
MRPS33
HIF1AN
TMEM70
ELMO1
FBXO42
CENPN
DUS4L-BCAP29
DUS4L
COG5
ATF7IP2
MRPL21
IGHMBP2
SNX17
EIF2B4
GTPBP10
NOL11
RNF103-CHMP3
RMND5A
CHD8
ZNF180
PIAS4
MON1B
PTPN12
RAD21L1
CCNC
RAB11FIP2
CCDC174
SEC31A
THAP9
ATAD2B
LZTS3
GSTM4
BLOC1S5
DMTF1
PCNA
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
PGBD1
BORCS5
GPCPD1
PKN2
UMAD1
CDS2
TNFSF10
GINS3
NAE1
ZFAND3
FRMD6
NDUFS3
KBTBD4
VIRMA
GOT2
VPS13D
UBE2D3
CDC42EP3
BUB1B
CISD2
ADPRHL1
ZNF48
DLST
UBXN2B
MACC1
DNAJC11
KIF16B
CLDND1
SUCLA2
RPL38
MDC1
LRRC34
ZNF233
ZDHHC4
PCMTD2
DPY19L1
CBX3
HNRNPA2B1
PRND
EML6
NME5
OTUD7B
RBM48
PEX1
ZNF621
SLC35F2
KIF22
SRR
SMG6
PHF11
GALNT2
ZNF354A
PDE12
POLE3
C9orf43
SIRPB1
ZNRF2
SBNO2
THG1L
PIGBOS1
PIGB
POLR3F
DZANK1
MRPS5
FBXW5
C8G
SF3B2
PPP1R37
DGKD