ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
MTRNR2L8
MTRNR2L2
WDR74
RAB37
PAXBP1
GBA
TTLL1
RGPD1
RGPD2
GOLM2
DCP1A
RAPH1
UBC
RBBP5
BSDC1
ILF2
HTR5A
H4C8
TDP2
ACOT13
NDUFS7
LOC102724265
TOP3B
MTRNR2L9
TARS2
SNAP47
JMJD4
COX16
TBC1D19
CCDC130
SLC44A1
EIF2D
B4GALT7
SUB1
USP30
TRIM9
CABIN1
NCOA7
FUT8
COMTD1
TPM1
ITGB3BP
EFCAB7
ATPAF1
ZMYM3
RAD54L2
FAM227B
DTWD1
NUF2
TMEM43
CHCHD4
NCBP3
COMMD2
NPAS4
ATP5MC2
ZNF76
TSPAN10
NPLOC4
TMEM259
SLC33A1
RPS14
CASC3
WDR11
EPS8
MRPL38
TATDN3
NSL1
BCL9
SAMD4B
TACO1
DMAP1
KNL1
CALM1
BARHL1
JAK1
AURKAIP1
PIGW
MYO19
WWOX
WDFY1
SNX19
PDE7B
PPP6R1
IQSEC3
ATP1A1
HMGB1
USPL1
UTP3
IPO4
ZNF670
RGPD5
RGPD6
TOR1AIP1
ZCCHC4
PDE8A
TRIP4
STX18
RRP15
KRTAP9-6
DRG2
KATNBL1
DPH6
MTF2
EPRS1
CNTNAP4
ANKRD20A1
BAIAP2L2
RPS29
FSIP2
RILP
CXCL8
RERE
KLHL12
MZT2A
ZFP30
STRBP
NOTCH2NLC
PDE4DIP
NOTCH2
DSTYK
NOTCH2NLB
NOTCH2NLA
CCDC92B
MRPL21
IGHMBP2
GNAL
COPS4
DUS1L
COG2
NCOA3
RPS6KB2
TEFM
POLE4
FAF1
PCYT1A
FAM98B
ALG10B
FRG1
CDC73
NUDT15
ZER1
TAF1C
MKRN2
MFAP3L
THEM4
COL6A1
STX16
HARS2
HARS1
PLK1
RHOG
RPS7
POR
FAM72B
CLTB
TTLL12
ALKBH3
ZFP37
ARSD
MED23
UIMC1
NEUROD4
PCDH1
SF3A3
FAM160B1
SDHAF3
SNX16
SELENOH
STX6
SLC24A1
AGK
DCAF10
RBBP8NL
CCDC107
POLG
IKZF3
ZMPSTE24
CAPN2
SLC25A51
NSFL1C
NAB2
NUP107
INTS5
MRPS14
RABGAP1
TMEM242
TTC26
MFSD4B
CDK3
MTR
CEP72
MDM4
SLF1
KIAA0825
CSRP1
CDK5RAP1
NR1H3
ACP2
RHOT2
FGD4
ISM1
DGAT1
HIBADH
ATAD2B
BLOC1S1
MRPS31
TMED1
GPAM
ZNF527
ADNP
PACC1
ATG4C
RBM25
SNX18
GTF2H4
MRPS18C
HELQ
LTB4R
LTB4R2
CIDEB
PRKG1
FBXW7
LIMCH1
SSBP1
CCDC174
PARP2
SRFBP1
CREG2
ADRM1
DOCK7
MT1X
RAF1
CEBPA
SYT7
HECTD2
CBX1
DPP9
XKR8
TPK1
BUD13
ZNF35
AP3B1
SAAL1
KLKB1
RNF187
AARS2
PUM1
TYW3
CRYZ
SACM1L
CLUAP1
THG1L
FAM25E
ZC3H6
C12orf43
ZNF829
ZNF568
CCDC200
YPEL3
PDE11A
FEM1C
ZNF117
BAAT
YWHAQ
MAPRE2
CAT
RABGAP1L
ARHGAP39
DUSP6
ZNF562
ZNF623
JMJD1C
PEX3
ADAT2
FRA10AC1
FAAH
RPL27
C3orf14
TTC32
ACOX3
SUPT7L
SLC4A1AP
DEFB124
LUC7L2
FMC1-LUC7L2
RBBP9
TRMT44
DNAJC25-GNG10
DNAJC25
CEP85
NME1
INTS12
GSTCD
RPL37
REEP3
ZSCAN31
MNAT1
CALCRL
LSG1
NOS3
POLR3B
SKP2
LMBRD2
GTF3C3
TMEM41A
DNAJB12
METTL25
CCDC59
NEMF
KDM3A
ACYP2
STC1
PPIP5K2
GTF2H2
PAFAH2
SAR1B
MOB4
RTTN
VTA1
NMBR
REXO4
DPY19L4
GABPB2
TRMT5
SLC38A6
MAIP1
KANSL3
STAT3
TFPT
PRPF31
KDM1A
FMC1
ATF7IP2
MTERF4
ATF7IP
EIF3F
DISP1
MRPL44
NDUFB3
FAM126B
ZNF408
ARHGAP1
SLTM
RAB30
GTF2H2C_2
GTF2H2C
INO80C
TTI2
MRPL40
HIRA
CFAP298-TCP10L
CFAP298
ZNF391
POLR2J3
ZNF426
MTIF2
MRPL30
MITD1
PSMF1
COX7A2
OPA1
NUP54
WDR36
CCDC97
RCAN1
KMT2A
SNRPB
CCNC
TBL1X
PPIG
MRPL48
SMG5
GFM2
C8orf37
GLIPR1L2
COPS7B
SMG8
BMS1
ATR
NBPF1
PDCD6IP
XKR7
BRF2
MRPL1
SNIP1
CYP17A1
GALK2
CLK4
BNIP1
KLHL20
AKAP10
GSTA4
TSFM
EIF1AD
BANF1
FAM133B
N4BP2L2
BTD
ZSCAN25
ZNF292
TRUB2
COQ4
MTBP
MRPL13
PLEKHM3
SF3B6
FAM228B
SLC35A3
RUVBL1
TUT1
GTPBP3
DDX18
SCNM1
LYSMD1
ZNF280D
FABP6
CENPV
CCDC88A
SMU1
DHX16
TGFBR2
ZSCAN30
C10orf88
LRP6
COA6
TMEM222
VPS13B
NECAP2
RPL5
CLTC
SNX17
EIF2B4
RBM45
CEP85L
MRPS23
NOP16
HIGD2A
SCAND1
CPPED1
ISY1-RAB43
ISY1
C17orf75
ZSCAN22
WDR55
EIF3E
PUS10
PEX13
R3HCC1
PIH1D2
NKAPD1
TMEM101
SUGCT
MPLKIP
GTF3C5
ACTL8
COPS2
HSPE1-MOB4
HSPE1
HSPD1
FGD3
CT45A10
ALG10
SNRPD1
TMA16
METAP1D
DHTKD1
SEC13
BCAR3
ALG14
FGFBP3
RPS15
GRPEL2
SREK1IP1
CWC27
CBWD5
TTC4
CCNI
HEATR1
CBWD3
HAX1
POLDIP3
SMIM13
ANK1
CHD1L
PRPF18
RNF6
PHIP
DNAJC24
DCDC1
NBN
METTL9
CEP120
DRAP1
C11orf68
CLASP2
RPS3A
SNRPB2
HUS1
MAN2C1
INO80B
NDUFS3
KBTBD4
SOD2
DDX1
DCLRE1B
AP4B1
MED18
THOC2
RPS20
MRPL3
TARS3
HDAC2
SMARCD2
PES1
APRT
ZNF561
SMG7
CRKL
ZNF165
ABCG1
ZBTB45
SLC35B1
SRP9
PRELID3B
GARS1
AASDH
PIP4P2
PRKAB2
PDGFD
MEMO1
ZBTB40
CASS4
THOC5
DNAJC6
RNF125
IRF9
KRR1
POLR3E
ZNF540
TPR
ODR4
C18orf21
STOML2
NDUFA4
LARS2
SLC45A4
CUL5
UBOX5
FASTKD5
RIF1
ORC4
MBD5
SEC23B
RPS26
NOL12
TMBIM6
MTOR
NMNAT1
LZIC
VIRMA
SESN1
HLA-E
ATP5MC3
FUT3
MRPS33
TIGD1
EIF4E2
SRRM3
TMEM132A
ZNF609
CBWD6
MAPK1IP1L
CCDC150
CCAR2
FAM234A
TRAF6
RAG1
CHMP7
CDIPT
TMEM68
TGS1
ANKRD54
VN1R2
MRPL16
MRPL39
RABGGTA
ABCA3
FAM13A
CTNNB1
EIF2B3
ATP10D
DCT
ZNF571
ZNF770
PSMD3
CGGBP1
RAB18
ZMYM5
RMND1
KMT2D
ARMT1
POLR1F
GFI1B
BANP
CT45A7
CT45A6
CT45A3
DDX41
DNAJC11
FAM207A
CFAP20
EEA1
ERCC6L2
ADPRS
WTAP
RPL38
SNRPE
MMACHC
MAGOH
C11orf49
LRRC29
CRLF3
AHCYL1
HNRNPA1L2
FUT10
ZKSCAN2
TOMM20L
PSMB2
TNPO3
SUGT1
SLC30A6
PRMT5
CEP57L1
TRMT61B
ZNF114
RPTOR
NDUFC2-KCTD14
NDUFC2
SLC39A3
WDR31
ATXN7L2
KCNH1
RWDD1
C2CD5
DDX46
CRBN
RAD52
MRPL42
EPHA3
AAR2
MAN2A1
ANKRD40
PIKFYVE
YTHDC2
ZNF3
PPIL3
NIF3L1
SLC39A13
SENP1
PFKM
SFSWAP
INTS2
GORASP2
OTUD7A
PLCH1
QRICH1
U2SURP
LRRC59
PPIH
PPRC1
TAS2R4
ACBD4
PTPN4
MIER1
CYB5R4
TIPARP
CYB561D1
MEGF8
PRPSAP1
SNRPD3
GUCD1
CDK19
CAMK1D
FBXO22
MED4
ARMH3
SLC9A1
CLUL1
UCHL3
COMMD6
WDPCP
MDH1
OSGEPL1
RSAD1
GOT2
TMBIM1
TRMT2A
RANBP1
EFHD1
ATAD2
PNPO
PLK3
MRPS15
INKA2
DDX20
PLEKHM1
ATG101
STAU1
SET
OGT
PET117
KAT14
ZNF518A
WARS2
C3orf38
DCP1B
DPYD
CD47
ZSCAN12
ZNF791
ZNF490
LTN1
SLC25A53
PSMA1
ARL14EP
ALDH9A1
CDK12
ZNHIT6
GABPA
DQX1
ATP5PF
BORCS7
RAB5IF
S100A4
TMEM167B
SMIM12
PPOX
PPP1R11
RANBP2
SPEF2
DHRS13
C12orf73
RPS19
AP1G1
ZNF383
CCNL1
ZDHHC6
VTI1A
TVP23B
GEMIN5
PDE4C
RBL1
PSMD6
EIF4E
PHF21A
MTRES1
SECISBP2L
TRAM1
AMD1
ATG5
CREM
COIL
MDC1
MAST2
STXBP3
ITGA4
CPLX2
PPP2R5B
PSMD11
UFD1
MRPL58
CDC45
ZNF226
GDAP1
DYRK4
SPG11
WDR43
COMMD4
PCBP2
LTA4H
NEK7
COL4A6
COL4A5
CHCHD6
WDR70
TRMO
UCHL5
RO60
PARK7
THAP10
LRRC49
PRMT3
ANTKMT
FKBP5
ANKRD36
STAT6
NFAT5
CSTF2T
TOMM20
RBM28
ZNF846
TTC14
ZNF461
TRDMT1
YJU2
PIAS3
EIF2S1
ATP6V1D
KDM3B
IPO13
YBEY
MCM3AP
NFE2L2
SFT2D3
NEK4
SLCO1B3
ADAM22
ZNF570
ZNF569
TMEM30A
RPA2
TIGD6
HMGXB3
PRAME
RARS1
NUTF2
CENPT
RETSAT
ELMOD3
MLEC
SIRT4
ZNF331
MAPKBP1
GNB2
CIZ1
YWHAB
GCFC2
DHX8
ZC3HC1
KAT6A
RAB23
CSDE1
FOXJ3
PGBD2
KDM5C
ZCCHC8
MEX3C
CAPS2
PPP6C
TSGA10
SCP2
TINF2
NME2
MFSD8
IFTAP
HECTD1
ABHD18
VPS13D
C19orf48
POMP
VPS72
UBE3B
KCTD10
ZCWPW2
MTMR6
CNTRL
AZI2
RFX7
GOSR1
CLPTM1
VAMP4
RAD51AP1
C12orf4
ACBD6
EIF5B
RTN1
NR1H2
UGCG
PRUNE2
EIF4A2
SEC31A
NSMCE4A
ZNF585A
POC1B-GALNT4
POC1B
PLS1
PIGC
NMRAL1
HMOX2
NCKAP1L
ZNF286A
PIGBOS1
PIGB
EXOC2
PPA2
SLC39A6
ELP2
GTF2B
GPN3
FAM216A
TAMM41
FNTB
YAP1
SMAP2
CYP51A1
METTL26
ASNS
ZNF350
TRPM3
NGDN
CDC5L
SPATA5
RPL6
NUDT6
RBIS
TMEM106B
TRAPPC8
CELF1
ELOVL2
TTC21B
SMAD5
RFFL
LIG4
EVI5
NAA20
POLR1H
SPAG9
DNAJB4
RPL29
TSC1
PLCL2
UBE2L3
PIK3R1
RBSN
RALBP1
MARCHF2
PTPRCAP
DYNLRB2
ZNF212
YTHDF2
UFC1
HES3
MCOLN1
FAM83D
AQR
ANKRD46
DDX27
FER
CSTF1
AURKA
ZNF25
TMEM170A
RHOT1
OAZ3
CCDC124
HIF1AN
ANGEL1
SMARCD1
RFXANK
MGST3
BORCS8-MEF2B
BORCS8
RPS13
KIAA1586
EDC4
GTPBP10
ANO8
CAMK2G
RNF207
COQ2
TMEM70
SLC2A4
FKBP8
ZNF354A
PRRG2
NOSIP
HEMK1
RNF220
LURAP1
GMPS
CYREN
KIAA1549
CALM2
SH2B1
NOXA1
M1AP
PKD2L2
SPECC1
BCKDHB
ST6GAL1
HNRNPD
GEMIN7
EIF5A2
TRMT1
TM2D1
BRWD1
TXNDC9
SYNPO2
CDYL