ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945293 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◣ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SNX16
FAAH
YPEL3
ACYP2
ZNF562
AKAP10
PDE11A
BAAT
FEM1C
CEP85
ZNF117
NOS3
GTF3C5
ACOX3
TRMT44
ZNF280D
FABP6
C3orf14
ITGB3BP
EFCAB7
TCF4
NUTF2
CENPT
N4BP2L2
SET
CCDC200
BSDC1
WDR74
MTRNR2L8
RABGAP1
MTRNR2L2
NUF2
RBBP5
MTF2
RAB37
CBX1
YWHAQ
MAPRE2
GBA
CAT
RPS7
RABGAP1L
DMAP1
ARHGAP39
ZFP30
AURKAIP1
SAMD4B
DUSP6
SF3A3
ZNF623
SSBP1
COX16
TARS2
JMJD1C
TBC1D19
SELENOH
CCDC130
MED23
TRIP4
PEX3
ADAT2
FRA10AC1
RPS29
TMEM242
RPL27
COMMD2
HTR5A
PAXBP1
TTC32
DSTYK
NPAS4
CLTB
SUPT7L
SLC4A1AP
DEFB124
LUC7L2
FMC1-LUC7L2
RBBP9
SLC24A1
ZMPSTE24
DCP1A
NDUFS7
DNAJC25-GNG10
DNAJC25
TTLL12
NME1
SLC33A1
EIF2D
INTS12
GSTCD
TACO1
STX18
TEFM
RPL37
REEP3
ZSCAN31
MNAT1
CALCRL
LSG1
POLR3B
STX16
RPS14
DRG2
SKP2
LMBRD2
ZNF829
ZNF568
GTF3C3
HMGB1
TMEM41A
GTF2H4
ALG10B
DNAJB12
METTL25
CCDC59
NEMF
KDM3A
STC1
UTP3
PPIP5K2
NOTCH2NLC
DCAF10
GTF2H2
INTS5
PAFAH2
SAR1B
MOB4
WDR11
MTR
RTTN
ATP5MC2
TOP3B
VTA1
NMBR
NOTCH2NLB
NOTCH2NLA
USPL1
REXO4
POLE4
DPY19L4
GABPB2
TRMT5
SLC38A6
MAIP1
RAD54L2
KANSL3
STAT3
SLC25A51
PDE4DIP
RERE
TFPT
PRPF31
IPO4
KDM1A
FMC1
ATF7IP2
MTERF4
PUM1
ILF2
TOR1AIP1
ATF7IP
TTC26
EIF3F
DISP1
MRPL44
NDUFB3
FAM126B
ZNF408
ARHGAP1
SLC44A1
NCOA7
TATDN3
NSL1
SLTM
MRPS31
RAB30
GTF2H2C_2
GTF2H2C
EPRS1
CDK5RAP1
INO80C
NR1H3
ACP2
CEP72
TTI2
PPP6R1
MRPL40
HIRA
CFAP298-TCP10L
CFAP298
ZNF391
POLR2J3
ZNF426
FAM227B
DTWD1
MRPL21
IGHMBP2
MTIF2
MRPL30
MITD1
MRPS18C
HELQ
PSMF1
COX7A2
OPA1
NUP54
WDR36
SNAP47
JMJD4
CCDC97
RCAN1
KMT2A
SNRPB
CCNC
TBL1X
PPIG
IQSEC3
MRPL48
SMG5
GFM2
TMEM43
CHCHD4
C8orf37
GLIPR1L2
COPS7B
SMG8
BMS1
ATR
USP30
NBPF1
PDCD6IP
XKR7
BRF2
MRPL1
RNF187
TDP2
ACOT13
SNIP1
CYP17A1
GALK2
CLK4
BNIP1
KLHL20
AARS2
ALKBH3
GSTA4
TSFM
FRG1
EIF1AD
BANF1
FAM133B
BTD
ZSCAN25
ZNF292
TRUB2
COQ4
MTBP
MRPL13
PLEKHM3
SF3B6
FAM228B
CDC73
COPS4
FAM160B1
ATP1A1
NSFL1C
DUS1L
SLC35A3
RUVBL1
TUT1
GTPBP3
TTLL1
DDX18
SCNM1
LYSMD1
SDHAF3
TMED1
CENPV
CCDC88A
RGPD1
SMU1
DHX16
TGFBR2
FAM98B
ZSCAN30
C10orf88
TPK1
LRP6
COA6
TMEM222
VPS13B
NECAP2
RPL5
CLTC
SNX17
EIF2B4
RBM45
CEP85L
MRPS23
NOP16
HIGD2A
SCAND1
LOC102724265
CPPED1
ISY1-RAB43
ISY1
C17orf75
ZSCAN22
WDR55
EIF3E
PUS10
PEX13
R3HCC1
PIH1D2
NKAPD1
TMEM101
PDE7B
SUGCT
MPLKIP
ACTL8
DPP9
COPS2
HSPE1-MOB4
HSPE1
HSPD1
FGD3
CT45A10
ALG10
SNRPD1
TMA16
ATG4C
METAP1D
DHTKD1
MRPS14
SEC13
BCAR3
ALG14
FGFBP3
RPS15
GRPEL2
SREK1IP1
CWC27
CBWD5
TTC4
CCNI
HEATR1
CBWD3
HAX1
POLDIP3
SMIM13
ANK1
NUP107
CHD1L
PRPF18
RNF6
PHIP
DNAJC24
DCDC1
NBN
METTL9
CEP120
DRAP1
C11orf68
CLASP2
RPS3A
GNAL
SNRPB2
HUS1
MAN2C1
INO80B
NDUFS3
KBTBD4
B4GALT7
SOD2
RGPD2
DDX1
DCLRE1B
AP4B1
CCDC107
MED18
THOC2
RPS20
MRPL3
TARS3
TSPAN10
NPLOC4
HDAC2
SMARCD2
PES1
APRT
ZNF561
SMG7
CRKL
ZNF165
ABCG1
TMEM259
ZBTB45
SLC35B1
SRP9
PRELID3B
GARS1
AASDH
CASC3
PIP4P2
PRKAB2
PDGFD
MEMO1
ZBTB40
CASS4
THOC5
DNAJC6
RNF125
IRF9
KRR1
POLG
POLR3E
ZNF540
TPR
ODR4
C18orf21
STOML2
NDUFA4
LARS2
SLC45A4
CUL5
UBOX5
FASTKD5
RIF1
ORC4
MBD5
ADRM1
SEC23B
RPS26
NOL12
TMBIM6
MTOR
NMNAT1
LZIC
CLUAP1
ZCCHC4
VIRMA
SESN1
HLA-E
ATP5MC3
FUT3
MRPS33
TIGD1
EIF4E2
SRRM3
TMEM132A
ZNF609
CBWD6
MAPK1IP1L
CCDC150
CCAR2
UIMC1
FAM234A
TRAF6
RAG1
CHMP7
CDIPT
TMEM68
TGS1
ANKRD54
VN1R2
MRPL16
MRPL39
RABGGTA
ABCA3
FAM13A
CTNNB1
EIF2B3
ATP10D
DCT
ZNF571
COG2
ZNF770
PSMD3
CGGBP1
RAB18
ZMYM5
RMND1
KMT2D
ARMT1
POLR1F
GFI1B
CCDC174
BANP
CT45A7
CT45A6
CT45A3
DDX41
DNAJC11
SACM1L
FAM207A
CFAP20
EEA1
NCBP3
ERCC6L2
ADPRS
WTAP
RPL38
ZNF76
SNRPE
MMACHC
MAGOH
C11orf49
GPAM
LRRC29
CRLF3
AHCYL1
HNRNPA1L2
FUT10
ZKSCAN2
TOMM20L
PSMB2
TNPO3
KNL1
SUGT1
SLC30A6
PRMT5
CEP57L1
TRMT61B
ZNF114
RPTOR
NDUFC2-KCTD14
NDUFC2
SLC39A3
WDR31
ATXN7L2
KCNH1
AGK
RWDD1
C2CD5
DDX46
CRBN
RAD52
MRPL42
EPHA3
AAR2
MAN2A1
ANKRD40
PIKFYVE
YTHDC2
ZNF3
PPIL3
NIF3L1
SLC39A13
SENP1
PFKM
SFSWAP
INTS2
GORASP2
OTUD7A
PLCH1
QRICH1
U2SURP
RHOT2
LRRC59
PPIH
PPRC1
TAS2R4
ACBD4
PTPN4
MIER1
CYB5R4
TIPARP
CYB561D1
MEGF8
PRPSAP1
SNRPD3
GUCD1
CDK19
CAMK1D
FBXO22
MED4
ARMH3
SLC9A1
CLUL1
UCHL3
COMMD6
WDPCP
MDH1
OSGEPL1
RSAD1
GOT2
WDFY1
FBXW7
TMBIM1
PARP2
TRMT2A
RANBP1
EFHD1
ATAD2
PNPO
PLK3
MRPS15
INKA2
DDX20
PLEKHM1
ATG101
STAU1
ADNP
OGT
PET117
KAT14
ZNF518A
WARS2
EPS8
C3orf38
NOTCH2
DCP1B
DPYD
CD47
ZSCAN12
ZNF791
ZNF490
LTN1
SLC25A53
PSMA1
ARL14EP
ALDH9A1
CDK12
ZNHIT6
GABPA
DQX1
ATP5PF
BORCS7
RAB5IF
S100A4
TMEM167B
SMIM12
PPOX
PPP1R11
RRP15
RANBP2
SPEF2
DHRS13
C12orf73
RPS19
AP1G1
ZNF383
CCNL1
ZDHHC6
VTI1A
TVP23B
GEMIN5
PDE4C
RBL1
PSMD6
EIF4E
PHF21A
MTRES1
SECISBP2L
TRAM1
THG1L
AMD1
ATG5
CREM
COIL
MDC1
MAST2
STXBP3
ITGA4
CPLX2
PPP2R5B
PSMD11
UFD1
MRPL58
CDC45
ZNF226
GDAP1
DYRK4
SPG11
WDR43
H4C8
COMMD4
PCBP2
LTA4H
NEK7
COL4A6
COL4A5
CHCHD6
WDR70
TRMO
UCHL5
RO60
PARK7
NUDT15
THAP10
LRRC49
WWOX
PRMT3
ANTKMT
FKBP5
ANKRD36
STAT6
NFAT5
CSTF2T
TOMM20
RBM28
ZNF846
NEUROD4
TTC14
ZNF461
TRDMT1
YJU2
PIAS3
EIF2S1
ATP6V1D
KDM3B
IPO13
YBEY
MCM3AP
NFE2L2
SFT2D3
NEK4
SLCO1B3
ADAM22
ZNF570
ZNF569
TMEM30A
RPA2
TIGD6
HMGXB3
PRAME
RARS1
RETSAT
ELMOD3
MLEC
SIRT4
ZNF331
MAPKBP1
GNB2
CIZ1
YWHAB
GCFC2
DHX8
ZC3HC1
SRFBP1
KAT6A
RAB23
CSDE1
FOXJ3
PGBD2
KDM5C
ZNF527
ZCCHC8
MEX3C
AP3B1
CAPS2
MKRN2
PPP6C
TSGA10
SCP2
TINF2
NME2
MFSD8
IFTAP
HECTD1
ABHD18
VPS13D
C19orf48
POMP
VPS72
UBE3B
KCTD10
ZCWPW2
MTMR6
CNTRL
AZI2
RFX7
GOSR1
CLPTM1
VAMP4
RAD51AP1
C12orf4
ACBD6
EIF5B
RTN1
NR1H2
UGCG
PRUNE2
EIF4A2
SEC31A
NSMCE4A
ZNF585A
POC1B-GALNT4
POC1B
ZNF670
PLS1
PIGC
NMRAL1
HMOX2
NCKAP1L
ZNF286A
PIGBOS1
PIGB
EXOC2
PPA2
SLC39A6
ELP2
GTF2B
GPN3
FAM216A
TAMM41
HARS2
HARS1
FNTB
YAP1
SMAP2
CYP51A1
METTL26
ASNS
ZNF350
TRPM3
TPM1
NGDN
CDC5L
SPATA5
RPL6
NUDT6
RBIS
TMEM106B
TRAPPC8
CELF1
ELOVL2
TTC21B
SMAD5
RFFL
LIG4
EVI5
NAA20
POLR1H
SPAG9
DNAJB4
RPL29
TSC1
PLCL2
UBE2L3
PIK3R1
RBSN
RALBP1
MARCHF2
PTPRCAP
HIBADH
SNX19
DYNLRB2
ZNF212
YTHDF2
UFC1
HES3
MCOLN1
FAM83D
AQR
ANKRD46
DDX27
FER
CSTF1
AURKA
ZNF25
ZER1
TMEM170A
RHOT1
OAZ3
CCDC124
HIF1AN
ANGEL1
SMARCD1
RFXANK
MGST3
BORCS8-MEF2B
BORCS8
RPS13
KIAA1586
EDC4
MTRNR2L9
GTPBP10
ANO8
CAMK2G
RNF207
COQ2
TMEM70
SLC2A4
FKBP8
ZNF354A
PRRG2
NOSIP
HEMK1
RNF220
LURAP1
GMPS
CYREN
KIAA1549
CALM2
SH2B1
NOXA1
M1AP
PKD2L2
SPECC1
BCKDHB
ST6GAL1
HNRNPD
GEMIN7
EIF5A2
TRMT1
TM2D1
GOLM2
BRWD1
TXNDC9
SYNPO2
CDYL
PSMB7
TPD52L1
R3HDM2
SASS6
N6AMT1
NOL8
CENPP
TRPC4AP
EEF1AKMT2
COX18
VPS52
RPS18
AAAS
ZC3H6
VPS25
HMGN4
HIGD2B
GCLM
BBS4
ZRANB2
TMEM248
SLC26A4
PSRC1
ABLIM1
ZBTB8OS
RBBP4
SCYL3
TRIM41
RAB11A
DNAJC21
SNX12
USO1
DLC1
SYT7
UTP25
RNF216
DHRS7
TRIM5
CRNKL1
CRB1
CFAP61
ADARB1
RCAN2
DROSHA
C5orf22
SLC35E3
POLR2C
VRK2
HDAC8
NOL11
ZNF326
ZZZ3
MAD1L1
CWC25
GFM1
LZTR1
CALM1
ZNF501
ANKMY2
NUDCD3
RIMBP3C
RIMBP3B
NARS1
TBPL1
PDE8A
DEDD
AJUBA
GSPT1
DAB1
SRSF11
RBM25
MRPL19
RPL26
CLPB
RNF146
EEFSEC
TRMT11
FZD1
CDKN2AIPNL
SMIM8
BCL2L13
FBXO28
RESF1
PPP1R8
GRAMD1C
LAMTOR5
OTUD7B