ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPS derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

CCDC200
CBX1
POU5F1
KLF14
JMJD1C
REEP3
SNX16
TMEM216
LUC7L2
FMC1-LUC7L2
SOX2
ELOVL2
C3orf14
POU5F1B
RAB37
FANK1
CCDC130
ATF7IP2
DHX40
MAIP1
RPL26L1
FEM1C
TMEM43
CHCHD4
PDE4DIP
POTEH
KCNJ15
ITGB3BP
EFCAB7
ZFP30
RPS14
ATP1A1
MTF2
SPDYA
SIVA1
FAM227B
DTWD1
NBPF1
ANK1
USP30
RNF187
PEX3
ADAT2
RTTN
ENOSF1
GK5
DHRS7
PAQR9
BRWD1
NUF2
HMGB1
USPL1
TMX4
TTLL12
AVPR1A
SAMD4B
TRAF6
RAG1
CD47
SOX30
C5orf52
SPATC1L
TRDMT1
SLC11A2
SDCBP
GEMIN5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HUS1
ZKSCAN2
SLC39A6
ELP2
ANKRD18B
TBC1D2
DCP1A
AGBL3
XKR6
NEMF
POLR2J3
CBWD5
CBWD3
ANKRD54
CLGN
ZCCHC7
GMDS
TMEM242
STX16
EIF2S2
GAGE2A
ADAMTS20
MIS18BP1
RPAP2
GLMN
CNTLN
KBTBD7
ANO5
CAT
FKBP9
SULT1B1
SLC44A1
HECTD1
GAGE12I
GAGE7
GAGE5
GAGE4
GAGE2B
RAD54L2
EIF5A2
BTBD10
NEIL3
STX18
MRPL40
HIRA
LRP6
PRELID3B
NEK7
YTHDF3
MTRNR2L8
SLC10A7
ZSWIM9
LIG1
ZNF562
NUP54
PLCL2
ARHGEF12
DNM3
ZIK1
TMEM41A
KAT6B
RIPPLY3
CTNNB1
CRH
C1orf53
PRPF40A
ARL6IP6
ILRUN
GLRB
YPEL3
TASOR
C3orf80
KCTD3
NLGN4X
PGBD2
BTG1
GPR150
CNTRL
C5
RNF38
ZMYM5
TAS2R4
NOTCH2
KANSL1
PPP2R2B
RIMS2
ZC3H12C
YBEY
MCM3AP
PARP16
TMEM229A
ADAM22
MARCHF7
RANBP2
USP35
KCTD21
RPS29
MED4
RUNDC1
PTGES3L-AARSD1
PTGES3L
WBP4
ELF1
CTSC
RFK
GRID2
NSFL1C
GDAP1
FH
CTXN2
DDX60L
MYEF2
POLE4
LIMS1
ATL3
HSPA2
DPY19L4
MTERF4
PSMG1
PPP1R9A
KLHL7
HACD3
TNFRSF11B
COLEC10
ZNF623
TRMT5
SLC38A6
MRPS31
SNRPB
SNIP1
TARS3
C18orf21
EPS8
XKR4
CLTC
RNF130
INPP5F
OTOP1
POTEB
POTEB3
CDYL
SELENOT
HDAC1
SAMD13
SNRNP48
ARHGAP39
ZNF518A
KBTBD3
AASDHPPT
CCDC50
UTS2B
DEPDC1
MFSD14A
LRRC8C
OPRK1
MRPL48
ACBD6
SMAD5
MRPS5
MTHFS
CARS2
FIGNL1
SVOPL
DSTYK
TMA16
CCNI
FBXO34
RMDN2
BOLA1
TBC1D3H
TBC1D3G
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
KCNN2
MRPL21
IGHMBP2
SMIM13
HLCS
NAPG
WNT2B
ARNT
C15orf61
CERS6
RUVBL1
SLC25A53
EEFSEC
PEX2
COG6
HECW2
ZSWIM5
SF3A3
CLK4
C12orf73
EPM2A
PRKD3
WDR74
RNF6
ZNF791
ZNF490
P2RY1
CRTAP
ADIPOR1
RAD23B
SORCS1
EIF3D
MDM4
ACAT1
SSH2
DKK1
GADD45A
CLOCK
AKR1E2
TTC32
ZNF280D
PPP2CA
RRAS2
CPD
STBD1
FAM98B
CPPED1
RSRC1
MRPS30
TTLL7
TATDN3
NSL1
ALKBH3
MRPL42
SEC31A
PIK3R1
DR1
THAP9
TYW1B
EIF4G2
ATG10
VPS37A
CNOT7
STK17A
NFE2L2
BCKDHB
EEF1AKMT2
PPP5D1
CALM3
RPS6
SLC35B4
ALG1
PARP4
E2F7
ENAH
COG2
TIGD6
HMGXB3
VAMP4
SH3RF2
MBD4
IFT122
STX17
DTD2
SLC39A8
ANGEL2
P4HA1
TMOD3
HSPA1B
MED23
GTF2H2
PDCD6IP
RNF125
WDFY1
RPL6
THOC3
L3HYPDH
JKAMP
MTLN
PTPN11
ZC3H15
ARFGEF1
JRKL
CCDC82
PIK3CA
SVIP
HPS3
TMEM191B
NSMAF
PCDHGC3
RIOX1
ZDBF2
SGIP1
HEATR5B
GPATCH11
ZNF829
ZNF568
REXO4
ZNF25
NDUFA6
COPS8
ARL4A
CCDC71L
SH3GLB1
BTG3
HACE1
GNAI1
BTF3
TRIM27
KANSL3
ZSCAN25
NOL12
G3BP2
GPR155
SMARCAL1
SUCLG2
CDC42SE2
INTS12
GSTCD
DRG2
ZNF391
MTIF2
GFM2
TOMM20L
CALM2
PXK
SPATA7
HDAC9
LRRC7
LIN7C
C4orf36
HSF2
GPD2
YTHDC2
UBE2D3
CLN5
RNASEH2C
SLC36A1
DEPTOR
BSDC1
METTL25
CCDC59
SENP1
PFKM
UBQLN1
STXBP5L
SMIM10L1
PRH1-TAS2R14
PRH1
SEC61A2
MPP5
PPP1R12A
NAP1L1
CHST14
COMMD2
RBBP9
GTF3C3
COX18
UBE2Q1
HERC4
PHF3
TBC1D31
ZNF544
SRSF12
SETD5
NID2
GGA1
RBM15B
RPN2
NT5E
MROH8
AKAP9
STAG3
GPC2
LRRC75A
SLC46A3
WDR72
SLC35A3
RPL5
NMRAL1
HMOX2
CRNKL1
CFAP61
MRPL17
SYT1
ZSCAN32
ZNF174
NEK9
PCM1
ZNF354C
SLAIN2
ORC2
DNAH14
FBXL5
ACP6
ZNF518B
TRERF1
DIPK2A
P3H1
ZNF485
DPF2
HTR5A
MPHOSPH10
MCEE
SPRYD7
MTMR9
SMAP1
SS18
WDR12
CARF
PTPDC1
MTR
MRPL44
ATR
KLHL20
MTBP
MRPL13
CBWD6
MAPK1IP1L
GOT2
SMIM12
EXOC2
TTC37
ARSK
TYW3
CRYZ
CCDC138
ZNF24
HECTD2
CHSY3
ISCA1
CFAP206
NELFCD
CHMP2B
HADH
POLR3D
SLC25A27
CYP39A1
FNBP1L
ADGRG6
TACSTD2
FN1
CRHBP
DUS1L
METTL9
DCP1B
ZC3H6
ADAR
DNAH7
PCNA
MAGEF1
KBTBD6
LUC7L3
FANCA
GRIA4
DDX25
ZNF32
TGFBR2
PKD2L2
PPP1R8
ZNF341
PPIL1
HERC3
PYURF
PIGY
SRPRB
BTBD1
ABHD5
NCAM1
RHEX
CENPV
PSMA1
NTSR2
LRRD1
ATP6V1C1
CEP78
ZNF26
MSRB2
LGALSL
TJP2
PDE3B
GNAL
MRPL58
ANKRD36
FAN1
CTHRC1
GPR37
RHBDD1
THUMPD1
MTHFD2
IMPACT
SMC3
MYBL1
TMEM185B
NRG3
ATP7B
ALG11
UGT8
RNF32
KMT2A
MRPL39
SLC25A28
SLC25A32
DCAF13
ANTXR2
ZFYVE9
BTRC
EFCAB13
SYS1
GMFB
NUP58
NASP
B3GALNT1
RPS3A
B4GALT7
MEMO1
ANKRD36C
MRGPRX3
BBS5
MANF
RDH14
CEP63
ANAPC13
GINM1
UBE2V2
STRN3
AP4S1
GTF2E2
ZFP2
PTGES2
GCH1
HSPA1L
HSPA1A
EIF2D
AGK
CCDC90B
NOC3L
INO80D
AMZ2
FAM185A
SLC38A1
PAG1
CCDC112
ERV3-1-ZNF117
ERV3-1
MINDY2
EIF3A
PCYOX1L
CBR3
ZNF454
SUSD5
DDX1
WDR47
ZFP91
ICE2
AGL
WASHC4
ALMS1
ADRB1
ARPP21
CAVIN3
GAGE12H
GAGE12E
GAGE12D
GAGE12C
GAGE12G
GAGE12F
OR10AC1
PDE11A
MAN2C1
ZNF670
TRAM2
GAPVD1
TATDN1
NDUFB9
CADM1
DIDO1
GID8
CCPG1
C15orf65
MYNN
CTNND2
RNF138
TSPAN12
ZNF443
TAB2
ZNF229
PRDX6
SEMA6D
HORMAD2
FRA10AC1
MOB4
BMS1
C10orf88
CHD1L
PRKAB2
PDGFD
UBOX5
FASTKD5
POLR1F
KCNH1
EPHA3
TTC14
POC1B-GALNT4
POC1B
TMEM106B
SLC35E3
SRSF11
SMIM8
NLE1
PSMD14
TFAM
CC2D2B
ETNK1
ALG9
ZNF354B
ZNF780A
ZC3H14
GPR180
MTMR2
ADK
ATP5F1E
RICTOR
STARD6
C18orf54
ITM2B
RRS1
RPAP3
PTDSS1
MTERF3
UPF2
PXYLP1
HMGCLL1
CLVS2
QRFPR
CXCL6
TRPC3
SNX32
TRPA1
SLC24A1
TTI2
ABCA3
ELF2
ACSL1
EGLN1
PPP2R5A
C2orf69
CTBS
LCMT2
ADAL
TRIM44
LY75-CD302
LY75
PGAP4
FAM114A1
SEC31B
TRIL
WDR11
HSPE1-MOB4
HSPE1
HSPD1
AASDH
SLC45A4
CFAP20
RAD52
FBXO22
DYNLRB2
HNRNPF
NXPE3
GHITM
PKM
PEX7
FAM161B
COQ6
CNIH1
JAK2
KDR
MAD2L1
ARFGAP3
GUCY1A2
EDNRB
FZD6
ERICH6
SYT16
TCF25
SELENOH
NCEH1
CYP2R1
NFYC
BORCS5
CEBPB
FECH
SNCA
INO80
FAM149A
CFAP91
FBLL1
TTC12
SERP2
DCAF10
FAM160B1
APRT
CYP51A1
CBR1
ELP1
ABITRAM
NUDT4
ZNF621
NUDT4B
SEC24B
GABPB1
TMEM30B
KIFBP
RALGAPA1
NKIRAS1
SCYL2
DEPDC4
NR1D2
PLD1
GRB14
KMT2D
ZBTB6
CCT8
TMEM267
RB1
ZNF830
CCT6B
ZNF622
TESMIN
HSD17B12
ANKRD18A
EPSTI1
HSPA5
NTAN1
MDFIC
MOV10
PLPPR5
ST6GAL2
TRIP4
SUPT7L
SLC4A1AP
SLC26A4
TBC1D13
RMDN1
FANCF
CPNE3
FZD9
PHF10
PHLPP1
PODXL2
DIRAS2
LIFR
RHOB
SPAG6
RPL37
CGGBP1
FER
RINT1
POLR3G
MBLAC2
PPP1R12B
NDFIP1
PRICKLE1
STAMBPL1
AGPS
MRS2
P3H2
ZNF654
ENOX1
TPBG
PPIG
NBN
THSD7A
TMEM65
STEAP1B
THOC1
USP53
POLR2M
RIPK2
UBA5
ACAD11
BAG2
USP47
CAPN7
PCYOX1
SEPTIN2
HDLBP
MGA
FBXL20
LSM5
AVL9
RAD51
SPART
CNRIP1
ARHGAP31
MED17
NEFL
SVEP1
OPA1
SDHAF3
ZSCAN30
WDR31
ASNS
CLPB
PROS1
FSIP2
STAT1
ERI1
ATP6V0D1
FUT8
PMS1
ORMDL1
ZNF567
RPS4X
GCA
SRD5A3
IFRD1
ERMP1
ZNF594
FAM174A
RTKN2
PIFO
UGP2
ST6GALNAC3
KBTBD8
ATP5PO
PCLO
LRRCC1
PTBP3
RPP25
TMEM217
TBC1D22B
FAM237B
BCL2L10
MB21D2
GALK2
COPS2
ADNP
RNF126
MINPP1
ZFPM2
CPE
ASCC3
ATL1
MAP7D2
DDX59
PRKACB
PPP3CA
NDUFA10
ZNF860
OSBPL10
TBC1D30
ROBO1
ZNF655
HDHD5
GNS
LACC1
CCDC122
ZNF287
PTGFR
KLF11
TRPC4
RBM28
ZCWPW2
AZI2
DROSHA
C5orf22
MAPK14
USP1
ERLIN2
PGRMC2
CPOX
PLPP1
NREP
CDPF1
NT5C3A
SHLD2
GLUD1
SIGMAR1
MTARC2
UBE2E3
CGAS
HDGFL1
MOXD1
CDC73
INTS2
CCDC126
IQCH
AAGAB
POMZP3
NUP214
PRELID3A
PSTK
SFT2D2
STARD4
C11orf97
FAM47E
TMEM254
PI4K2B
TRAK2
STRADB
KTI12
FAM47E-STBD1
MEGF10
SNX9
CCDC149
PFN2
TBC1D7-LOC100130357
TBC1D7
DNER
CNIH4
CD302
B3GALT1
SOWAHC
RIMKLA
DNAJC25-GNG10
DNAJC25
THOC2
PIGBOS1
PIGB
SPECC1
ZNF326
ARL6IP1
PPM1H
ATG16L1
PPT1
MAP3K2
TSEN54
CASKIN2
ACO1
ZNF624
GTF2A1