ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584310 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◣ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LOC102724770
DGCR6
PSMD1
ZNF335
RABL2A
NME6
RABL2B
NUP85
CACTIN
MAPKAPK5
DUX4
IPO13
VDAC2
VTI1B
POLR3F
DZANK1
NVL
HSPA9
PSMG2
CEP76
TAOK3
SUDS3
DYNC1LI2
FAM187A
EFTUD2
CCDC103
FRG2C
GOSR2
RWDD1
NUP205
LYRM4
FARS2
TBCK
AIMP1
SRD5A1
NSUN2
TLE6
RPL21
REXO1
NNAT
BLCAP
HADHB
HADHA
EXOSC5
BCKDHA
POLR2E
GPX4
MRPS7
MIF4GD
GGA3
STAM
C19orf48
PES1
WNT1
STAM2
S1PR4
NCLN
ARF1
UPF2
ATP5MG
DCTN1
SKP1
ANAPC7
TSNAX
FARSB
ZNF576
IRGQ
TSN
SART3
ISCU
PNO1
COX7A2L
TTC8
ZRANB2
SEC61B
RABGGTB
PDAP1
BUD31
XPNPEP3
ST13
DNAJB7
NOTCH2NLC
NOTCH2
G6PC2
CAPRIN1
ZNF503
SMC2
PCBP1
TMED1
SF3B3
COG4
MRPL11
RBBP5
VARS1
SEC22B
HOXA3
HOXA4
PI4KB
FABP7
SMPDL3A
ACTR10
NDUFA4
RPL35A
IQCG
LMLN
PROSER1
NHLRC3
RPS27A
CLHC1
RPS23
ATP6AP1L
GOLGA5
SELENOF
HS2ST1
FZD8
SFI1
EIF4ENIF1
SLC35B1
DPH6
LBX1
PSMD12
UFM1
PIP4P1
OSGEP
APEX1
ZFHX4
PLAGL1
MRPS5
SERINC5
PAK1IP1
C6orf52
ADK
AP3M1
HSPA1B
ZNF608
FGF19
RPS12
ANK2
NFKBIL1
DDX39B
ATP6V1G2
RBKS
BABAM2
RHBDD3
EWSR1
SUPV3L1
USP1
C6orf47
BAG6
APOM
PARP11
ARHGAP24
PPP1R1B
DMRT3
FAM104A
C17orf80
NEUROG2
ICMT
HES3
ABCG2
ETS1
RAB11FIP1
ICE1
ARHGAP11A-SCG5
ARHGAP11A
TLE1
FOXP2
RPS29
LRR1
TM9SF1
IPO4
TSSK4
ITGB6
TMEM120B
MYLK4
DBX1
SOGA3
ADNP2
SUCLG1
TLE4
EVA1A
LAMA4
LRATD2
NCOR2
FRG2
PTGES2
PALM2AKAP2
MUC20
NFIA
PCDH11Y
FOXB2
MRPL3
COMMD1
CCT4
C5orf63
CBFA2T2
PDE1B
KBTBD8
LHFPL2
TMEM14A
IRF2BP2
UNKL
C16orf91
ARID3C
DCTN3
PIN4
PDE4DIP
OR6B2
NDUFA10
GRIK2
PAF1
MED29
SYNPO
RPL7
RDH10
TRIM71
ATOH1
PDZRN3
PDHB
ADAM18
BNIP3
PRUNE2
BRINP1
MSX1
KITLG
METTL11B
PRDM13
MYH2
SCGB1A1
DIO2
TPM1
WT1
HES1
CABP7
CCDC200
PIM1
RGS12
VEZT
FGD6
FOXD3
NEK7
MBTPS1
PIPOX
RND3
ARL4D
LRIG3
TRABD2B
DDAH1
CCN1
PRDM12
VIP
TMEM107
TMEM275
KCNK16
ASXL3
PDHX
APIP
LRAT
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CITED2
ARHGAP22
NR2F1
MRTO4
EMC1
RPL34
FRMD7
USP17L21
USP17L20
USP17L12
USP17L22
SPTBN1
GLRA1
MEIS2
CD69
TPO
SMURF1
PGLYRP1
IGFL4
SH3BP5
STK36
RNF25
NEUROD1
DAPL1
SNAPC1
ID2
DTX4
VGLL4
TAF9
RAD17
AK6
IGFBP2
AGPAT3
CLDN11
RIMKLB
CLEC19A
HOXD3
CEP41
CDX2
OAZ3
TMEM143
SYNGR4
ERRFI1
ZCCHC13
CERCAM
ME3
GALNT14
EIF2S3
HSPA6
HOXB3
HOXB4
ACSS3
SOX21
AGMO
MOB3B
COL17A1
C10orf90
FHL1
RBP3
PDE6B
SPACA1
SEMA4D
ALDH1A2
OTUD6A
AWAT2
NRARP
GPR176
GORAB
PMAIP1
CTXN3
ID1
B3GALT2
GMPR
CRYAA
CRYAA2
NEBL
TRMT9B
LARP7
RARB
MAP1B
RAI14
GNAS
UNCX
PIGX
CEP19
NEUROG3
KLHDC8A
ATOH8
BECN2
SEC11C
NMNAT2
DHRS3
CACNA1D
SMARCA2
CCDC88C
MAD2L1BP
RSPH9
LIMK2
KIF21B
EVX2
VAV3
PRRX1
CETN1
FAM222A
MXI1
LZTS1
NECTIN1
TEX2
KCNK10
GAS7
RIC8B
FMNL2
HPS1
HOXD4
NTM
TPRA1
IL17B
GUCY2C
PDE12
CEBPA
HOXA1
HOXA2
CNPY2
BAIAP2
RPS13
URM1
SLC7A5
JAKMIP1
TLE3
PPFIBP2
PPP1R12B
CCDC198
PKHD1
ZGPAT
ARFRP1
TLE2
SKIL
HMX2
BUB3
LMO1
SPIRE1
RARA
POP5
ACVR1
TMEM72
C1orf105
NXPH4
KLB
LRGUK
MTMR7
ELAPOR2
BFSP1
UBE2I
NEUROG1
KCNN4
OSER1
PGPEP1L
CEBPD
ALKAL2
HOXC6
HOXC5
SLA
RTL8B
CDC73
ABCB5
OR5A2
OR5A1
CHD7
GTF3A
NUTM2D
CTNNA3
DDX3X
LRRC1
PAM
NPAS1
TSPAN13
GSX2
REV3L
BICRA
SNRPN
MED4
RABGAP1L
FLVCR2
MXRA7
LRIG1
TMEM9
FGD3
GADD45GIP1
STXBP5L
CAMK2N1
GPR61
HOXB1
RASL12
KBTBD13
FAM118A
USP17L11
PPP1R1A
POU2F2
RFX3
USP17L19
PCBD2
ERCC1
MNX1
OSBPL11
ZNF746
PHC2
DLG2
ALPL
PRRC2C
NEO1
TPST2
CLEC18C
SHF
NINL
FGFR2
CDH16
TNNI3K
LECT2
CRABP2
DMBX1
PAH
ASCL1
RILP
NCOA7
FOXP1
PPP1R16B
LOC102724265
RGL1
PADI2
FBXL18
ACTB
MUSTN1
ITIH4
SSBP2
TMEM237
POTEJ
ST18
HOXC4
DMD
TTR
TRPM3
PHOX2B
TRIM65
MRPL38
RUNX1T1
BTBD1
GJA8
CCDC33
ZFX
CPA1
SYCP2
PPP1R3D
FAM217B
PLCH1
C1orf226
HDAC9
ST8SIA3
FOXN4
TBX3
USP17L18
USP17L17
CYP26A1
PRR16
AMBN
PDX1
FXYD2
ZNF585B
ZNF383
ID3
DSCAML1
ZNF285
CDPF1
GNG12
ZNF367
PREX2
NPY2R
METTL24
CLDN2
ELMOD2
TNFRSF19
TANC1
RPN1
IKBKB
STARD13
FMN2
GTF3C4
DDX31
USP17L13
USP17L15
SYBU
CAMTA1
MEF2C
RAN
LEKR1
FSTL1
NANOG
ALKBH5
SLC2A9
EFNB2
DONSON
MEIS3
LHX2
SPCS1
GLT8D1
CNN3
TMPPE
GLB1
SMUG1
SLC39A14
NPAS3
GUCY1A1
RCOR3
HNF1A
MAB21L2
CS
CHD8
LOC100509620
HPD
LMO2
FAM181A
KLHDC7A
ADO
PBX2
GPSM3
GPR84
AGER
HNRNPA2B1
CBX3
BNC2
ZFAND1
LCA5
CHMP4C
CLRN1
TNFSF18
IPO11
DIMT1
FOXL3
RCOR1
NXT1
NAF1
ZNF853
ARHGAP10
LDLRAP1
B3GALT5
MSI1
ELMO1
QPRT
DLL4
CHODL
PDPN
HK3
ZNF214
NLRP14
APOLD1
NAV3
LIX1
EPB41L2
MS4A4A
USP17L10
AQP6
CASC3
MILR1
TSPAN11
KCNIP4
FIGNL2
PLEKHG4B
GGCT
PCDH18
LIN28A
REC8
VSTM2L
VANGL2
TFAP2B
LGALS12
KRTAP12-1
RORB
NEK3
LRRC10B
RXRG
SPTSSB
KMT2A
NOTCH2NLB
NOTCH2NLA
TCF12
SYNPR
IGFN1
PRTG
LDHB
NRCAM
FNIP2
CLEC18B
CATSPERG
FAM162A
CCDC58
CPLX1
AXDND1
VOPP1
EVX1
SOCS3
CDRT15L2
KIF26A
FILIP1L
RBM39
CNTN1
GALNTL6
MMRN1
MBNL3
DIPK1B
ABAT
SH2B1
HRG
ARHGEF28
OAZ2
HOXA5
PSMB5
ADD3
PHTF1
DDO
SPARCL1
LMO3
SRSF11
LRRC40
KLHL7
FGF10
PPP2R5A
TRDMT1
GSTP1
TSPYL1
DSE
FGFR4
CDH4
CREB5
RIPOR2
MAFA
RASSF10
PRSS47
PAX8
DUSP2
ASTL
KAT6B
GCSAM
GALR1
EMCN
MAD2L2
DRAXIN
SPOCK2
NBAS
CDH18
MECOM
WBP1L
GAS2L3
OMD
TXNRD1
EAPP
DZIP3
CIP2A
BAHCC1
IFFO2
ADM
SOX6
SOAT2
IGFBP6
SH3BP4
DUSP4
PEX2
ANKRD6
ID4
RBP1
SIRT4
FAM107A
FRS2
FABP9
PROS1
ARL13B
JUN
SMIM28
CACNA1H
TP53INP1
DUSP29
ZP4
DUSP6
WDR74
STX5
INSM1
BBS9
LEFTY2
NHS
S100A10
CDCA7L
ANKLE2
DLX4
MAMDC2
ECEL1
SP5
RBPJ
NFE2
KDM2B
ARID3B
CLGN
GATA4
TMEM70
ELOC
GPR108
MALRD1
MYRIP
RBBP7
GADD45G
TRIP10
MTRNR2L2
MSH3
DHFR
SP2
GRSF1
IL23R
EXOC2
IL17RD
ARSG
KDM8
KAZALD1
MTRNR2L1
CR1L
MSX2
OTX1
RASSF2
PAX6
ZNF652
IFI16
SH3BP2
MRPL34
DDA1
ABHD8
LPIN1
INAFM2
IER3
FLOT1
NDUFS7
FGR
PKDCC
PYDC5
TCF7L2
SH3BP1
PLEKHO2
RFX2
MBD2
METTL3
CBX4
FKBP1A
SPATC1L
RNF149
PDP2
UPF3A
ERLIN2
SULF1
OR10AC1
ABLIM3
LYL1
MVB12A
HIP1
PRDM6
SPG7
HUS1
HEXIM2
KDM6B
CMTM7
ETFBKMT
PANK4
HES5
ARID5A
TESC
MAGEA11
RPS10-NUDT3
RPS10
NELFA
SEC14L1
TMEM212
ZFHX3
KCNAB2
JAK3
STK38
MYBPC3
MRS2
PARK7
CADM3
HSPA1L
HSPA1A
TBC1D10C
PPP1CA
TIGD1
EIF4E2
CCPG1
C15orf65
RPS6KA1
NOXO1
TDG
SMC6
GEN1
C12orf73
FRAT2
C11orf24
SASH3
NRROS
EMP3
NR1D1
HNRNPD
PNKD
KMT2E
ATG16L2
POR
RPS24
POLR3A
UBXN10
PLA2G2C
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
TAF12
CCDC88A
SNX1
CIAO2A
RASA4
TBC1D8
SPECC1
ARHGEF10L
NADK
BRWD1
IER3IP1
ZSWIM6
CARNS1
LMO4
DGKZ
SNCG
MMRN2
KLF17
FGFRL1
PAX3
RPLP1
HAND1
BIN2
ENO1
WDR6
NBEAL2
CCDC12
FOXB1
NKD1
SKIV2L
NELFE
PSTPIP1
EFHD2
FAM110A
MEOX1
RASA4B
NCOA2
TMEM104
NAT9
SHOX2
RSRC1
MTMR4
ATP23
CAND1
TBL2
STIL
OTUD7B
DIAPH1
ZNF76
CCDC114
NBPF1
USP15
CCDC102A
SLC39A7
RXRB
HSD17B8
PLEC
WNT10B
SNX3
ING1
CARS2
LRRN4
TRAF4
MTRNR2L8
MEF2D
ASB6
AHNAK
VAV1
SH2D3A
GSTT4
CABIN1
NRXN2
HOXC8
ZNF775
RASSF5
LPCAT3
LNPEP
BHLHE40
TMEM242
RARG
IMPG1
ZNF740
CSAD
CPSF4L
LIG3
DENND2D
PPP1R18
NRM
CDC42EP3
IRX5
CCDC174
DIAPH3
IQCH
AAGAB
RPL17-C18orf32
RPL17
NFKBIA
CCKAR
HEBP2
CBFA2T3
ZCCHC3
GATA6
C20orf96
CD79A
MNT
ZFYVE28
CFAP99
ZDHHC1
CD38
BCL3
POLD2
ZNF414
HOXB5
CPVL
CHN2
SKI
INAVA