ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584302 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◣ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LOC102724770
DGCR6
ZNF335
SP5
RABL2B
RABL2A
POLR3F
DZANK1
ZNF503
MBTPS1
MAPKAPK5
CACTIN
LEFTY2
DUSP29
NME6
NUP85
PSMG2
CEP76
HSPA9
IPO13
DUX4
NVL
PSMD1
POLR2E
GPX4
TAOK3
SUDS3
RWDD1
PHOX2B
NEUROG2
LARP7
VDAC2
C19orf48
TLE6
SLC35B1
EXOSC5
BCKDHA
DYNC1LI2
NDUFA4
FRG2C
ZNF576
IRGQ
TSN
FARSB
DCTN1
UPF2
RPL21
GOSR2
TBCK
AIMP1
VTI1B
FAM187A
EFTUD2
CCDC103
NUP205
ATP5MG
REXO1
PMAIP1
S1PR4
NCLN
ANAPC7
ACTR10
PALM2AKAP2
CAPRIN1
NNAT
BLCAP
STAM
NR2F1
SEC61B
MRPS7
MIF4GD
GGA3
HADHB
HADHA
STAM2
MSX1
PNO1
SKP1
DPH6
PI4KB
RPL35A
IQCG
LMLN
GRSF1
PES1
TMED1
COX7A2L
CNTN1
SRD5A1
NSUN2
SMC6
GEN1
PAK1IP1
C6orf52
GOLGA5
TSNAX
TTC8
LYRM4
FARS2
ZP4
RBKS
BABAM2
RBBP5
UBE2I
ICE1
MRPS5
PSMD12
UFM1
TCF7L2
PDAP1
BUD31
SART3
ISCU
PAF1
MED29
PCBP1
RPS12
RPS23
ATP6AP1L
SF3B3
COG4
USP1
RPS27A
CLHC1
PROSER1
NHLRC3
FAM104A
C17orf80
SELENOF
HS2ST1
SUPV3L1
VARS1
SMC2
ZRANB2
PPP1R1B
KANK4
CDH18
RABGGTB
TM9SF1
IPO4
TSSK4
SFI1
EIF4ENIF1
ARHGAP10
PRSS56
CHRND
PRRX1
GRIP1
ADK
AP3M1
ICMT
HES3
MUC12
MRPL11
C6orf47
BAG6
APOM
MBNL1
HSPA1B
PIN4
NEUROG3
PIP4P1
OSGEP
APEX1
PTGES2
SPECC1
BICRA
XPNPEP3
ST13
DNAJB7
NFKBIL1
DDX39B
ATP6V1G2
ECEL1
NHS
FRG2
ALDH1A2
STK36
RNF25
HES7
ALOXE3
OR2L13
OR2AJ1
FMNL2
COMMD1
CCT4
PAX6
SIX1
CCDC33
RPS29
LRR1
MESP1
GATA6
OR6B2
NDUFA10
MBNL3
FBXL18
ACTB
PDE6B
TTC13
ARV1
LZTS1
ARF1
MSGN1
EXT1
NEUROG1
SUCLG1
ATOH1
OAZ3
PDZD2
PTPRB
ARL4D
CCDC200
DEFB106B
DEFB106A
DEFB105B
DEFB105A
DEFB104B
DEFB104A
GADD45GIP1
ID2
ADGRL2
OTX1
H2BC17
H2AC17
H3C12
FOXP4
TLE3
ABLIM3
CDX1
GLRA1
TMEM212
GADD45G
ARHGAP11A-SCG5
ARHGAP11A
EOLA2
EOLA1
SERINC5
ZFHX2
CERS6
FOXB1
ZGPAT
ARFRP1
KHDRBS1
CR1L
TAF9
RAD17
AK6
ZSWIM6
ZNF608
UNC5A
RPL7
RDH10
MYC
ZNF585B
ZNF383
SEC11C
SLAMF8
FOXA2
MAGIX
STK38L
ID3
STK38
KRT20
SLC39A8
KCNJ5
URM1
SRCIN1
HOXA3
HOXA4
CNPY2
SLC39A7
RXRB
HSD17B8
COL11A2
RING1
PBX3
IRX5
IGFBP2
RPN1
POU3F2
LYPD6B
TMPPE
GLB1
GDNF
EBP
SP8
SHMT2
NEBL
MRTO4
EMC1
CDC73
EIF2S3
PDHX
APIP
CHODL
HOXB3
CLGN
HOXB4
HNRNPA3
HOXB2
KLF17
ANKLE2
SMPD1
CPSF4L
CDC42EP2
KLHL25
PITX2
APBA1
OTX2
COQ3
ZNF285
SCN2A
TBX3
VENTX
UTF1
HOXD3
CADM3
HOXD4
HOXB1
CDON
NAV3
CACNA1D
PFKP
SKIL
MSX2
KCNH1
RFX2
GPR78
DKK1
NKD1
GAD2
GTF3C4
DDX31
USP17L21
USP17L20
USP17L12
USP17L22
NRXN2
ETS1
PDPN
HOXA1
HOXA2
SNCG
MMRN2
BNIP2
GORAB
KDM2B
USP17L13
USP17L11
USP17L18
USP17L10
COLCA2
GSPT1
TLE2
ST18
KRT74
PDE12
EYA1
MEIS3
LRATD2
PTGES3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SRGAP2C
SRGAP2B
USP17L17
USP17L15
FOSB
IPO8
NFE2
FGFR2
SOST
GIMAP5
METTL11B
H2BU1
H2AW
CBX4
OR13A1
ALKBH5
NKX2-2
PAX2
ZNF746
SP7
NR4A2
CSTF2T
MEIS2
LRGUK
ASIP
SYBU
FTL
BAX
CBFA2T2
ATP1A4
PAX8
ITGB5
RPS24
POLR3A
DDAH1
CCN1
TPRA1
PSMB5
OLFML2A
NR6A1
MPP4
LIFR
DMBX1
GATA3
HERPUD1
PRUNE2
FABP7
AEN
CCDC9
WASHC3
TTYH1
BUB1
REC8
CTXN3
CWC22
SPCS1
GLT8D1
FKBP1A
TMEM123
UQCC2
CPN2
DPEP1
FAM3C
HES1
DEFA5
CPVL
CHN2
CCDC85A
TMEM107
USP17L19
ECM2
UNC5C
AGO1
FGF2
KCNN2
PPM1B
PRICKLE1
HAO1
LEF1
MYRIP
SH2D3C
LZTFL1
RAB11FIP1
ABCA5
PCBD2
WNT1
MSI2
SLC2A9
FOXB2
EML4
CERCAM
RBFOX2
VOPP1
ADNP2
MN1
DLL4
EIF2S1
ATP6V1D
ADO
MVB12A
BST2
EVX1
CDK15
CDX2
NOTCH2NLC
FZD8
VEZT
FGD6
NOTCH2
G6PC2
PLAGL1
BNIP3
LBX1
NEUROD1
DUSP6
WDR74
STX5
INSM1
BBS9
RARB
PDE4DIP
ZFHX4
ARID3C
TPM1
S100A10
RHBDD3
EWSR1
UNKL
DCTN3
SOAT2
IGFBP6
MUC20
NBAS
DAPL1
CDCA7L
FXYD2
C16orf91
ADAM18
ITGB6
UNCX
DLX4
PDHB
TMEM120B
MAMDC2
SEC22B
CITED2
TLE4
MYLK4
RARA
FOXP2
RBPJ
ANK2
FGF19
MAB21L2
ASXL3
ARID3B
ME3
FAM222A
KCNN4
GATA4
HOXC6
TMEM70
RGS12
ELOC
GPR108
MALRD1
ID1
NFIA
TRIM65
MRPL38
FOXP1
PAH
ASCL1
SMPDL3A
ERRFI1
RBBP7
METTL24
TRIP10
HOXC4
DSCAML1
MTRNR2L2
MSH3
DHFR
MRPL3
POP5
SP2
IL23R
EXOC2
IL17RD
PPFIBP2
ARSG
KDM8
RIMKLB
KAZALD1
NCOA7
MTRNR2L1
RUNX1T1
LAMA4
TRABD2B
DMRT3
RPL34
PRDM12
HOXA5
KMT2A
NOTCH2NLB
NOTCH2NLA
SNAPC1
CYP26A1
FRMD7
RASSF2
ZNF652
BFSP1
IFI16
SH3BP2
PARP11
MRPL34
DDA1
ABHD8
LPIN1
EVA1A
HOXC5
INAFM2
BRINP1
SH2B1
IER3
FLOT1
NDUFS7
NEK3
FGR
PKDCC
PYDC5
SH3BP1
PLEKHO2
MBD2
METTL3
DHRS3
SPATC1L
ARHGAP24
DBX1
RNF149
PDP2
AXDND1
UPF3A
SCGB1A1
TMEM14A
ERLIN2
SULF1
OR10AC1
CS
LYL1
C5orf63
HIP1
PRDM6
SPG7
HNRNPA2B1
CBX3
HUS1
HEXIM2
KDM6B
CMTM7
GTF3A
ETFBKMT
PANK4
HES5
LIN28A
ARID5A
TESC
MAGEA11
RPS10-NUDT3
RPS10
NELFA
ABCG2
NEO1
TLE1
SEC14L1
ZFHX3
EAPP
KCNAB2
JAK3
MYBPC3
NUTM2D
MRS2
PARK7
HSPA1L
HSPA1A
VIP
TBC1D10C
PPP1CA
PHC2
TIGD1
EIF4E2
CCPG1
C15orf65
RPS6KA1
NOXO1
TDG
C12orf73
SRSF11
LRRC40
FRAT2
C11orf24
SASH3
NRROS
EMP3
RAI14
NR1D1
PDZRN3
KAT6B
HNRNPD
PNKD
KMT2E
ATG16L2
KIF21B
POR
UBXN10
RASL12
PLA2G2C
KBTBD13
NCOR2
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
TAF12
CCDC88A
SNX1
CIAO2A
RASA4
SLC7A5
TBC1D8
ARHGEF10L
NADK
ERCC1
CATSPERG
BRWD1
IER3IP1
IRF2BP2
CARNS1
LMO4
DGKZ
FGFRL1
PAX3
RPLP1
HAND1
BIN2
ENO1
WDR6
NBEAL2
CCDC12
COL17A1
SKIV2L
NELFE
PSTPIP1
EFHD2
KITLG
FAM110A
MEOX1
RASA4B
ADM
NCOA2
REV3L
TMEM104
NAT9
SHOX2
RSRC1
MTMR4
ATP23
CAND1
TBL2
STIL
SMURF1
OTUD7B
CLDN11
CRYAA
CRYAA2
DIAPH1
ZNF76
CCDC114
NBPF1
USP15
CAMTA1
CCDC102A
PLEC
WNT10B
SNX3
NEK7
ING1
CARS2
LRRN4
MEF2C
TRAF4
MTRNR2L8
MEF2D
ASB6
AHNAK
VAV1
SH2D3A
GSTT4
CABIN1
MXI1
SOX21
ACSS3
HOXC8
ZNF775
RASSF5
LPCAT3
LNPEP
BHLHE40
TMEM242
RARG
IMPG1
ZNF740
CSAD
LIG3
DDX3X
DENND2D
PPP1R18
NRM
CDC42EP3
ZNF367
CCDC174
DIAPH3
GGCT
IQCH
AAGAB
RPL17-C18orf32
RPL17
NFKBIA
CCKAR
HEBP2
CBFA2T3
ZCCHC3
C20orf96
LDLRAP1
CD79A
MNT
ZFYVE28
CFAP99
ZDHHC1
DMD
CD38
BCL3
BNC2
POLD2
ZNF414
HOXB5
SKI
INAVA
CNOT2
TRERF1
RAC2
LRIG3
DTX4
ZNF718
ZNF595
CMTR1
PCNA
CDS2
TUBA1C
POLR2J3
TUBB
MDC1
SYNPO
IQGAP2
LFNG
SPACA1
SUPT4H1
SLC38A10
LRIG1
SCAMP4
ADAT3
RXRA
TYRO3
NDRG1
SMARCA2
MYO1G
NTRK2
OPA3
LOC102724265
CLDN2
RNASEH2B
TPST2
CREB5
GPAA1
EXOSC4
MYO1B
PPIB
MINDY2
PTK2B
DCSTAMP
H6PD
SLC9A1
SIRT4
DISP2
ADGRG5
GALNT10
KBTBD11
PKN2
DIPK1B
NDFIP2
MAPKAPK3
CISH
PLCB2
SMAD3
CDK5R1
AGTRAP
RYBP
GUCY1A1
USP3
ADCY7
ERI3
TRIM48
SHB
SEPTIN4
NKIRAS1
RPL22
RNF207
TXNRD1
PEX14
DFFA
GFI1
MOBP
MYO1F
FAM120B
NAA10
ARHGAP4
KCNH2
CYP51A1
YTHDF2
SMARCD2
PKM
NAA80
IFRD2
HYAL3
PCTP
TMEM275
PRDM1
HESX1
ELANE
CFD
ZNF397
PPCDC
MRPS24
RABGAP1L
CYP2E1
SLC35E2B
PPP1R1A
NOTUM
NDUFV1
TBRG4
ARHGEF1
HNRNPF
KIF5C
CCND3
NR1D2
ADORA2A
COL23A1
C1orf105
RNF166
CTU2
CYCS
TAF15
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
TMEM9
CRYBG1
EVX2
CNTN4
DGAT2
ZDHHC4
BAIAP2
CEP41
HMGCS1
ARIH2
SYTL1
SYTL3
MECOM
ABHD17A
CBWD5
CBWD3
SCNN1A
LTBR
TUBB3
MC1R
RNPEPL1
DUSP28
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
ARID2
THRAP3
B3GALT5
SOD2
MDFIC
KCTD6
SEMA6D
CPT1A
PTP4A2
IL6R
AKIRIN1
LAT2
KIF26A
SLC35E2A
ZFX
DHX16
ABHD11
KANSL3
FER1L5
CYTH4
MYEOV
PDE4D
CLDN9
FOS
PCDH11Y
NR2C1
MBD6
GAS7
DDIT3
TMEM222
FAM118A
FAF2
NECTIN1
C12orf50