ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039041 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◣ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
PSMD1
RABL2A
TAOK3
SUDS3
POLR3F
DZANK1
DYNC1LI2
PSMG2
CEP76
MAPKAPK5
NME6
CACTIN
IPO13
NVL
ZNF503
FRG2C
LOC102724770
DGCR6
TBCK
AIMP1
RWDD1
HADHB
HADHA
RPL21
S1PR4
NCLN
VTI1B
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
NSUN2
ID2
SLC35B1
NUP205
POLR2E
GPX4
STAM
HSPA9
EXOSC5
BCKDHA
TSNAX
MRPS7
MIF4GD
GGA3
HOXA1
HOXA2
REXO1
STAM2
DCTN1
DUX4
VDAC2
S100A10
UPF2
SKP1
LYRM4
FARS2
ATP5MG
GOLGA5
SMC2
BBS9
COMMD1
CCT4
FARSB
C19orf48
SUPV3L1
PAK1IP1
C6orf52
GOSR2
PSMD12
NNAT
BLCAP
RPS23
ATP6AP1L
SOAT2
IGFBP6
DPH6
VARS1
DAPL1
PES1
NDUFA4
SEC61B
ZNF576
IRGQ
TTC8
ZRANB2
TSN
SELENOF
HS2ST1
PDE6B
TMED1
MRPS5
PNO1
TM9SF1
IPO4
TSSK4
COX7A2L
PKDCC
RBKS
BABAM2
SFI1
EIF4ENIF1
ANAPC7
USP1
RPL35A
IQCG
LMLN
RBBP5
RARB
LYPD1
IL23R
CAPRIN1
PI4KB
SART3
ISCU
ICE1
MRPL11
PDAP1
BUD31
RABGGTB
RPS27A
CLHC1
ADK
AP3M1
FAM104A
C17orf80
PROSER1
NHLRC3
ARL4D
FRG2
XPNPEP3
ST13
DNAJB7
NFIA
PPP1R1B
ACTR10
PDE12
RBPJ
CDC42EP3
SYBU
MOBP
ZFHX3
PIP4P1
OSGEP
APEX1
SCNN1A
LTBR
VIP
NEO1
RPS12
HSPA1B
SLC22A2
LRRN4
C6orf47
BAG6
APOM
UFM1
MAGEA11
CBX4
C12orf50
C12orf29
PTK2B
ZNF608
CLGN
PCBP1
PTGES2
NR2F1
CREB5
NSUN6
ARL5B
OPA3
CCDC200
PAF1
MED29
CYP26A1
VANGL2
CITED2
SF3B3
COG4
DIAPH3
RBMS3
GABRB2
LARP7
KCNIP4
LAMA3
EIF2S3
FOXP2
ST18
TLE2
TAAR2
EPHA8
ZFHX4
HOXB1
METTL24
PAH
ASCL1
PXDNL
ZGPAT
ARFRP1
HEXIM2
TMCC1
MRTO4
EMC1
KCNN4
HBD
HBB
PDE4DIP
GADD45GIP1
PIN4
MBD2
ARHGEF38
ZNF407
SIRT4
NFKBIL1
DDX39B
ATP6V1G2
SUCLG1
GATA4
ZNF652
SLC30A4
OR6B2
NDUFA10
MSX2
USP29
BARHL2
TTI2
TPM1
CPB1
IL12RB2
MYRIP
SYNE2
CLECL1
CXXC4
POP5
HOXA3
HOXA4
HOXA5
TNRC18
LHFPL2
METTL3
RBFOX1
STON1-GTF2A1L
GSTT4
CABIN1
TMEM9
BANP
ARHGAP11A-SCG5
ARHGAP11A
HAPLN1
HMX2
BUB3
LAMB1
CCDC33
OTUD7B
SEMA3E
TMEM106B
SHOX2
RSRC1
SCMH1
LMOD1
HEY2
MYO1B
CNR1
HMGCS2
TMEM107
KAT6B
TBX2
MET
BNIP3
USP44
RARA
ARHGEF10L
STIL
RPS29
LRR1
CDS1
OAZ3
MAPK10
HES1
MKRN2OS
MKRN2
PRUNE2
ELF3
PDHX
APIP
HCAR3
HCAR2
CACYBP
STK36
RNF25
NEBL
SMAGP
ZNF746
SEC11C
PALM2AKAP2
SPAG17
KDM3A
ST7
RPN1
SHMT2
RPL7
RDH10
FOXP1
EFNB2
EIF3D
BHLHE40
LIN28A
CDC73
BAMBI
DNHD1
USP6NL
DMBX1
TYRO3
TBC1D9
CNPY2
SYNJ2
METTL25
CCDC59
GABRA6
TMC7
ZBTB25
ZBTB1
GFRA1
ZNF585B
ZNF383
TXNRD1
TMEM70
ELOC
EVX2
LCLAT1
SCML4
SPRY1
COX7A2
TAF9
RAD17
AK6
NDUFS7
CBWD5
CBWD3
CBWD6
ACKR3
CLNK
CCDC174
FMN1
RPS24
POLR3A
MACROD2
ACOT2
OSGIN2
TNK2
KLHL13
GPR108
TRIP10
SLC25A53
FAM199X
FREM2
SPIN1
DAOA
ZNF285
PCBD2
TCP10L
MVB12A
BST2
REC8
ZNF367
GTF3C4
DDX31
LARGE1
ZADH2
TSHZ1
ZNF827
NDUFB3
FAM126B
ABLIM3
TCF7
LRRFIP2
FRRS1
RABGAP1L
ABI2
AGO1
USP17L21
USP17L20
USP17L12
USP17L22
RPS10-NUDT3
RPS10
TMEM242
OTX1
USP17L13
USP17L11
USP17L18
USP17L10
ZBTB40
DDAH1
CCN1
CHODL
PCDH15
LYPD6B
ACSS3
MNT
ATP1B1
EPM2A
IL20
MEOX1
ELOVL5
GORAB
ARHGEF3
KIF16B
GTDC1
GRHL1
LYN
PLD5
TBX3
CFAP69
WDR74
STX5
CDH18
SNCG
MMRN2
KRT8
KRT18
ERFL
PDZRN3
TCF4
COMMD10
MGP
BCAS1
MTRNR2L1
ANGPT1
RAB11FIP1
SKIL
ADAM18
ESRRG
TNFRSF19
METRN
ANTKMT
ANK3
RIN2
PTCH1
ITGAV
KDM2B
MYZAP
GCOM1
RUNX1T1
PKIG
ZNF157
GARRE1
ABCB4
ALKBH5
MGST1
ARSF
SSPN
CADM3
KRTAP23-1
ANKRD6
DIPK1A
TNFSF15
CPE
GOLIM4
SLITRK6
DNAJB1
ATOH1
ERRFI1
FGD3
MMD
MAB21L2
MIER1
DNAI4
ZNF507
CCL28
RGS8
BTNL9
STX19
EMX2
BDP1
NT5C2
CS
RARG
ZNF395
GEMIN2
RBM20
OAS1
COL21A1
ARHGAP17
SCAMP2
PBX2
GPSM3
EOMES
AGER
FGD4
TMPRSS11F
ETFBKMT
ATXN2
EYA1
YTHDF2
SYNJ2BP-COX16
SYNJ2BP
MECOM
CSNK1A1
C1orf105
PIGC
C6orf163
IPMK
CISD1
ARID3C
DCTN3
CLDN14
SNAPC1
SMUG1
NEK1
CLCN3
BCAT2
IGF2BP3
POU2F1
CACNB2
IL17B
BEND7
ATP13A3
BUB1B
ANK1
SPCS1
GLT8D1
SERTAD2
NDST3
USP34
GGA1
SF3B1
NLGN1
LRRTM4
SLC19A3
ASXL3
GBX1
SIGLEC15
ARAP2
ID1
MRPL34
DDA1
ABHD8
HOXC6
HOXC4
HOXC8
NXPH4
SNX16
TACC1
PDCL3
TMEM270
METTL27
UNKL
C16orf91
SNX1
CIAO2A
EVX1
PRR13
VPS33B
ERP27
KDM6B
IFI16
PYDC5
COL23A1
TEX2
DMAC1
UBE2I
USP17L17
USP17L15
PLCH1
NEFH
ARHGAP10
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FAM118A
INKA2
DIO2
PRKD1
CEP70
RPEL1
PSMB5
LIX1
ELOVL6
NRXN1
RASSF6
SMIM32
HUS1
PEX14
DFFA
ITGB8
MLIP
IMMP1L
ELP4
BFSP1
DSTN
SLC6A4
ADM
RPP25
CRYBG1
SYTL1
ZNF697
PPP1R12B
THRA
AFAP1
LOC389199
KRT39
SMURF1
KAT6A
TMSB4Y
DUSP9
RPLP1
FXYD6-FXYD2
FXYD6
ATXN1L
DENR
SLC25A6
SLC35F2
KLF5
SALL3
DONSON
DHRS3
SRSF11
LRRC40
PDE4D
PXYLP1
AHSP
NMD3
TIGD1
EIF4E2
SEMA6D
MOG
KCNN2
BOD1L2
CNNM1
HNRNPA2B1
CBX3
PLEKHG1
USP17L19
SEPTIN2
HDLBP
NCBP3
SND1
B3GNT5
SORBS2
JAKMIP1
MYLK3
PDHB
DOCK9
UXS1
ABAT
MEIS2
ASB6
CNTN4
GVQW3
THAP12
FYB2
ID3
HAND1
SLC35E3
GADD45A
UBL4B
NTAN1
C2CD5
LMO4
CRABP2
PCLAF
TRIP4
SERHL2
ECEL1
TLE4
SOX5
TLE3
LBR
GJA10
HSPA4L
H2BC5
H1-4
TSPAN3
RAX
FAM240A
EXOC2
MCU
SRPRB
ATG4C
SELENOS
MYPN
MEGF6
RAI14
SKIDA1
RCOR3
SPATC1L
ARHGAP12
RALB
NEUROG1
LMO1
RIMS1
SH2B1
SEH1L
CTF1
BCL7C
URM1
VSIR
TNS3
SAR1B
SLC22A5
ARF1
RPL22
RNF207
NKX2-6
ANXA11
MGST2
NBEA
MAB21L1
ANP32C
DLAT
ATG10
KANK1
TMPPE
GLB1
EBAG9
KRTAP9-7
ACOT1
GNG2
MAGEB3
MAGEB2
PKN2
CTNNB1
PHB2
HNRNPD
NR2C1
CALM2
CHRNA9
CABCOCO1
BICRA
SHB
ZBED9
SUSD4
MRPL52
FAT2
SLC7A7
LYPD6
MFSD4A
ERICH5
KMT2E
DOT1L
AP3D1
SMIM28
POGLUT3
COLEC12
MSS51
TPRA1
PRDM10
HIP1
AKIRIN1
AKAP9
DAG1
GPRC5A
OTOL1
KLRC3
TAF12
GOLM2
ADAMTSL4
CLDN9
CLDN6
DERA
THOC6
HCFC1R1
TNFRSF12A
PARD3B
MELTF
PRKAG2
GPC3
EAPP
SIGIRR
PRTG
GRHL2
APLN
PHIP
DIP2C
SRGAP2
KMT2A
STK38
YAP1
SOX6
LDHB
FAAP24
CEP89
AMBN
OR51T1
SLC2A9
ZSWIM1
SPATA25
NEURL2
CTSA
OTUD4
LCA5
BCAP29
HMCN2
ABHD12
RTL1
PHACTR2
GINS1
BRINP1
SSBP2
TSSC4
TRIM55
ADH1C
ASPA
ADGRL2
TCHP
STOM
TFAP2A
PCLO
JMJD1C
RPA4
HPDL
CRHR2
CALCRL
SULF1
LPCAT3
BNC2
SLAMF8
TAF1A
HECTD4
EFEMP1
CACNG1
SOX14
SMARCD2
SLC35E2A
SLC3A2
ARL6IP5
UBA3
ELAPOR2
TAMALIN
FDFT1
TMTC3
CEP290
PPFIBP1
TMPRSS12
CA12
KANSL3
FER1L5
RAPGEF3
MACROH2A1
SLC48A1
SFRP2
CPVL
CHN2
POLR2J3
COX5A
RCOR1
PANK2
PRIM1
ZSCAN30
ACY3
GPR37
C9orf92
EMP3
CMTR1
TFAP2B
CDK20
PRAC2
PRAC1
HOXB13
TMEM207
RNF111
NR2C2
ETV1
RGS5
CCDC177
DACT2
MEIS1
REL
EID2B
EID2
NSUN7
NANOGP8
SYTL3
DYNLT1
DLG2
ANAPC15
INSIG2
LY6G5C
RNASE9
RYR2
TRIM16L
ZC2HC1C
ACYP1
ZKSCAN2
SSRP1
P2RX3
TMPRSS7
STATH
GCG
CCDC102A
ADGRG5
URGCP
OTP
URGCP-MRPS24
FRMD7
MINDY2
NR4A2
SECISBP2L
ZBTB7C
WDR26
RILPL1
PLCL2
EML5
ADAM28
PRXL2A
AP1B1
JCAD
ARSB
MACF1
PPP2R5A
NAGLU
PEX2
CIPC
TRIM24
TFAP2D
FMO1
EIF4H
QPRT
IQSEC2
RBP2
FNDC5
MRGBP
ZDHHC17
BRWD1
MYADM
VEZF1
POFUT2
GIGYF1
KCNS3
MPDZ
NFE2
ZBTB17
UFSP1
ACHE
PARP9
DTX3L
NEUROG2
MUC20
UQCC2
FGD5
ZNF397
SALL4
UBE2V2
EVL
GAB2
IFT52
TAAR1
POF1B
MYH8
BNIP2
CLK1
SFXN3
PDZD7
IQCB1
EAF2
NCOA7
ING1
CARS2
TUBB
MDC1
EHF
PKNOX2
ATXN7
SKAP2
EDNRB
MYO6
GBP1
PALLD
INF2
ZNF385B
MTF2
STARD13
GTF2H5
CPA2
DNAJA2
CDK6
TRAPPC6B
PNN
PRKRA
PJVK
USP28
PPARGC1A
CD74
SPTSSB
CADPS
DZIP3
CIP2A
BZW2
OTX2
ACBD6
BLM