ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584305 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◣ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NEUROG2
TLE6
ZNF335
LOC102724770
DGCR6
ZP4
RABL2B
MAPKAPK5
PSMD1
RABL2A
NME6
HES1
IPO13
VEZT
FGD6
NEUROG3
RWDD1
CACTIN
ICMT
HES3
VDAC2
TAOK3
SUDS3
NUP85
ZNF503
POLR3F
DZANK1
MBTPS1
DUX4
HSPA9
IGFBP2
DYNC1LI2
DUSP29
RPL21
NVL
ATP5MG
FAM187A
EFTUD2
CCDC103
VTI1B
PAK1IP1
C6orf52
ARHGAP10
TBCK
AIMP1
DCTN1
FRG2C
NNAT
BLCAP
NUP205
POLR2E
GPX4
ACTR10
SRD5A1
NSUN2
REXO1
CDX2
DPH6
SKP1
PMAIP1
C19orf48
S1PR4
NCLN
EXOSC5
BCKDHA
STAM2
PSMG2
CEP76
UPF2
MRPS7
MIF4GD
GGA3
SLC35B1
STAM
PES1
TSN
PNO1
GOSR2
HADHB
HADHA
URM1
SUPV3L1
INSM1
GLRA1
LYRM4
FARS2
FARSB
SEC61B
ANAPC7
RBBP5
CAPRIN1
SKIL
ZNF576
IRGQ
WNT1
RPL35A
IQCG
LMLN
ZDHHC1
RBKS
BABAM2
LARP7
LZTS1
PSMD12
TSNAX
TMED1
PCBP1
MRPS5
SART3
ISCU
NHS
ATOH1
ZNF608
GOLGA5
NDUFA4
VARS1
SF3B3
COG4
SFI1
EIF4ENIF1
ICE1
TTC8
ARF1
PAF1
MED29
MRPL11
COX7A2L
RPS12
PI4KB
SMC2
PDAP1
BUD31
IL17RD
BNIP3
RPS23
ATP6AP1L
PIP4P1
OSGEP
APEX1
MALRD1
GADD45G
RBBP7
USP1
PANK4
HES5
HOXA3
HOXA4
ZRANB2
NAV3
TM9SF1
IPO4
TSSK4
LEFTY2
DUSP6
NOTCH2NLC
NOTCH2
NEUROG1
HSPA1B
KDM8
FAM104A
C17orf80
TTYH1
SELENOF
HS2ST1
PPP1R1B
NBAS
CCDC33
TESC
RPS27A
CLHC1
CERCAM
NFKBIL1
DDX39B
ATP6V1G2
UFM1
XPNPEP3
ST13
DNAJB7
G6PC2
PAX6
PRRX1
ADK
AP3M1
UBE2I
SERINC5
FAM222A
ST18
B3GALT5
FZD8
RPS29
LRR1
DLL4
NRXN2
CPSF4L
PLAGL1
PHOX2B
RABGGTB
PDHB
ETS1
PROSER1
NHLRC3
HOXB1
CR1L
PTGES2
NEUROD1
HOXB3
HOXB4
ADNP2
TMEM212
ASXL3
OR10AC1
BICRA
PNKD
HHIP
C6orf47
BAG6
APOM
TLE2
ITGB6
LHPP
NCOA7
RASL10B
RAB11FIP1
HNRNPA2B1
CBX3
FKBP1A
PIN4
SULF1
NOXO1
SYNGR3
GFER
TAF9
RAD17
AK6
FRG2
TRABD2B
CNTN1
NEDD9
ERRFI1
GTF3A
NUTM2D
PDPN
RYBP
PDE6B
MRTO4
EMC1
STRA6
UNCX
DDX3X
SLC10A2
OPLAH
GUCY1A1
SOX12
HOXD3
HOXD4
SEC11C
EPHA5
MYRIP
DLX4
CRYAA
CRYAA2
PSMB5
STK36
RNF25
RGS12
TMEM120B
NEK3
KAZALD1
CSRNP1
CBFA2T2
ARHGAP11A-SCG5
ARHGAP11A
RIMKLB
PAH
ASCL1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BFSP1
ME3
LIMCH1
PRUNE2
COMMD1
CCT4
CCDC200
OR6B2
NDUFA10
NR2F1
METTL11B
RHBDD3
EWSR1
ZFX
KDM2B
BANK1
SCGB1A1
LRATD2
GADD45GIP1
PDHX
APIP
CNTN4
HES7
ALOXE3
ARL4D
TPRA1
CDCA7
TTLL6
KRT16
RPN1
SCARB1
LPIN1
FJX1
GFRA3
CACNA1D
RPH3A
TLE4
OTX1
HNF1A
EIF2S3
TIGD1
EIF4E2
SPACA1
TMEM107
RAI14
KIF26A
ABCB5
ZGPAT
ARFRP1
COL17A1
SCARF2
CNPY2
PCBD2
SYBU
OAZ3
BRWD1
MBNL3
WDR59
UPF3A
LRIG1
CLGN
KCNN4
GDNF
PDGFA
RPL7
RDH10
REV3L
HOXA2
SUCLG1
MDFIC
SOCS3
CLDN2
CDC73
ANKLE2
LBX1
SOX11
HNRNPD
PPP1R1A
LAMA4
ARID3C
DCTN3
RARA
DMBX1
TCF7L2
ECEL1
C6orf132
GPR20
AXDND1
ZMAT4
TNC
CLMP
GTF3C4
DDX31
REC8
EHF
WBP1L
DHRS3
TBC1D8
MAFA
ADAM18
SALL1
ZNF585B
ZNF383
DDAH1
CCN1
NID1
CAMTA1
CXCL12
ECM1
ERLIN2
AQP6
SNAPC1
LIN28B
BAHCC1
PDE12
HOXA1
FXYD2
DSCAML1
CDX1
DBX1
HOXB8
HOXB7
HOXB6
FGFR4
CATSPERG
MSX2
IRX5
BAIAP2
XIAP
SLC45A3
GORAB
C15orf61
TPH2
CPN2
ZNF214
NLRP14
ANK2
ALDH1A2
MAST2
KIF21B
GPR176
METTL24
VOPP1
CD99L2
NFILZ
SIK1B
SIK1
USP17L21
USP17L20
USP17L12
USP17L22
C8orf34
H2BU1
H2AW
ZADH2
TSHZ1
SLC39A6
ELP2
PPM1B
TMEM131L
DIPK1B
TMSB15B
PRDM12
RBPJ
WDR74
STX5
CDH18
FAM214B
STOML2
PIGO
TMPPE
GLB1
FOXB1
ADAMTS15
CD82
PACSIN2
CYP26A1
TRIM56
RADIL
PIPOX
CADM3
QPRT
ZNF703
LIG3
BAZ2B
TPM1
GAD2
ABLIM3
KDM6B
ZSWIM6
KLF17
FABP7
EBF3
CPLX1
SCN5A
LRRC4
HMGN1
ID2
CDC42EP2
LOXL4
RPL24
ZNF746
SOX21
POU3F2
TEAD1
FAM107A
ZFP36L2
LRRC15
MYLK4
FOXA2
RILP
SLC22A2
DEFA5
OR8J1
LZTFL1
DHX32
ONECUT2
TBX3
PDPK1
CEMP1
HOXA5
ERCC1
CUEDC1
HOXA6
PFKP
RFX2
ADO
DST
PKNOX2
CPVL
CHN2
LINGO1
SYNE4
LOC101927572
ALKBH6
RPS10-NUDT3
RPS10
RPS24
POLR3A
EIF4H
ALKBH5
SLC7A5
SOX6
FABP5
FGF19
HNRNPA3
MTCH2
RNF138
FBLN1
JAKMIP1
LHX2
TEX30
ZFHX4
MSX1
KLHDC8A
NAV2
ACSS3
ADGRL2
ABHD11
SMC6
GEN1
PPP1R35
ZCWPW1
MEPCE
TRAP1
SALL4
METRN
ANTKMT
EIF2S1
ATP6V1D
CCDC78
HSPA1L
HSPA1A
MSI1
KLF6
RUNX1T1
TLE1
DTX4
FAM171A2
ID3
NEBL
KCNIP4
GZMK
HOOK2
PHC2
YAP1
SPOCK2
KMT2A
FRMD7
TBL1XR1
CST6
HOXA7
CATSPER1
OTOF
FAM166C
ITPRIP
CYP51A1
SPCS1
GLT8D1
ARHGAP24
H3-3A
MUC20
ZNF775
KIAA0895
C6orf226
NUP210
KMT2B
TDG
C12orf73
DAAM1
TPST2
PPP2R5A
MEX3B
GREB1
ADAMTS18
RPRM
PAX3
KRT20
EFNA5
KLHL15
CNKSR3
MUSTN1
ITIH4
SRY
PIGR
MEIS3
DHRS4L1
STMN1
OLFML2A
NR6A1
TLE3
C8B
SEMA6D
HEY1
SRGAP3
BBS9
HOXC4
PPFIBP2
SNCG
MMRN2
KEAP1
EIF4E3
LDHB
NMNAT2
DNAJC25-GNG10
DNAJC25
EBF2
DAPL1
ZFHX2
HOXD1
STK38
TFDP2
CA4
PAX4
FEZF2
C5orf63
CLDN11
HOXC6
HOXC5
LEMD2
LRRC10B
THEMIS
SERPING1
TPCN1
FGF2
PCDH11Y
TMA16
TMEM70
ELOC
ALOX5AP
GNAI1
TUBB3
MC1R
PON2
TANC1
TGFBI
USP17L13
USP17L11
USP17L18
USP17L10
HOXB9
ADM
CER1
CS
MEF2C
TAGLN3
CCBE1
MEIS2
IFI16
PYDC5
FBXO10
MNT
TCF4
CEP97
TCF20
TMEM14A
MEOX1
ZNF285
R3HDM4
IL37
RARB
LIN28A
NKIRAS1
NR1D2
ENO1
RPL17-C18orf32
RPL17
TP53I11
MSI2
ATP1A4
ZFHX3
HOXA9
MARCHF7
LAPTM4A
SP5
NUTM2G
SPG7
PCBP4
RFX3
GPR62
SRSF11
LRRC40
BNIP2
FABP9
USH1C
OTOG
ME2
TYRO3
PANK2
PCDH18
IFNA21
RGS16
LDLRAD3
FOXP1
PBX3
PRAMEF12
PRAMEF1
SEMA4B
C1orf141
IP6K3
ERI1
ELMO1
LYPD6B
LCA5
PLEKHA6
MRPL3
CSTF2T
FOXD1
CDK14
N4BP3
BTF3
HRK
EOMES
OLFM2
CRTAM
SEMA4F
M1AP
STARD13
ABAT
GAS8
NELFA
GPR157
TTC13
ARV1
REV1
RBP1
EAPP
PALM2AKAP2
PDE4DIP
S100A10
UNKL
SOAT2
IGFBP6
CDCA7L
C16orf91
MAMDC2
SEC22B
CITED2
FOXP2
MAB21L2
NFE2
ARID3B
GATA4
GPR108
ID1
NFIA
TRIM65
MRPL38
SMPDL3A
TRIP10
MTRNR2L2
MSH3
DHFR
POP5
SP2
GRSF1
IL23R
EXOC2
ARSG
MTRNR2L1
DMRT3
RPL34
NOTCH2NLB
NOTCH2NLA
RASSF2
ZNF652
SH3BP2
PARP11
MRPL34
DDA1
ABHD8
EVA1A
INAFM2
BRINP1
SH2B1
IER3
FLOT1
NDUFS7
FGR
PKDCC
SH3BP1
PLEKHO2
MBD2
METTL3
CBX4
SPATC1L
RNF149
PDP2
LYL1
MVB12A
HIP1
PRDM6
HUS1
HEXIM2
CMTM7
ETFBKMT
ARID5A
MAGEA11
ABCG2
NEO1
SEC14L1
KCNAB2
JAK3
MYBPC3
FBXL18
MRS2
PARK7
VIP
TBC1D10C
PPP1CA
CCPG1
C15orf65
RPS6KA1
CHODL
FRAT2
C11orf24
SASH3
NRROS
EMP3
NR1D1
PDZRN3
KAT6B
KMT2E
ATG16L2
POR
UBXN10
RASL12
PLA2G2C
KBTBD13
NCOR2
GRHL3
LYPD1
KDM3A
PRDM10
PAX8
SLCO4C1
TAF12
CCDC88A
SNX1
CIAO2A
RASA4
SPECC1
ARHGEF10L
NADK
ACTB
IER3IP1
IRF2BP2
CARNS1
LMO4
DGKZ
FGFRL1
RPLP1
HAND1
BIN2
WDR6
NBEAL2
CCDC12
NKD1
SKIV2L
NELFE
PSTPIP1
EFHD2
KITLG
FAM110A
RASA4B
NCOA2
TMEM104
NAT9
SHOX2
RSRC1
MTMR4
ATP23
CAND1
TBL2
STIL
SMURF1
OTUD7B
DIAPH1
ZNF76
CCDC114
NBPF1
USP15
CCDC102A
SLC39A7
RXRB
HSD17B8
PLEC
WNT10B
SNX3
NEK7
ING1
CARS2
LRRN4
TRAF4
MTRNR2L8
MEF2D
ASB6
AHNAK
VAV1
SH2D3A
GSTT4
CABIN1
MXI1
HOXC8
RASSF5
LPCAT3
LNPEP
BHLHE40
TMEM242
SLC2A9
RARG
IMPG1
ZNF740
CSAD
DENND2D
PPP1R18
NRM
CDC42EP3
ZNF367
CCDC174
DIAPH3
GGCT
IQCH
AAGAB
NFKBIA
CCKAR
HEBP2
CBFA2T3
ZCCHC3
GATA6
C20orf96
LDLRAP1
CD79A
ZFYVE28
CFAP99
DMD
CD38
BCL3
BNC2
POLD2
ZNF414
HOXB5
SKI
INAVA
CNOT2
TRERF1
RAC2
LRIG3
ZNF718
ZNF595
CMTR1
PCNA
CDS2
TUBA1C
POLR2J3
TUBB
MDC1
SYNPO
IQGAP2
KHDRBS1
LFNG
SUPT4H1
SLC38A10
SCAMP4
ADAT3
RXRA
NDRG1
SMARCA2
MYO1G
NTRK2
OPA3
LOC102724265
RNASEH2B
CREB5
GPAA1
EXOSC4
MYO1B