ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◣ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
IPO13
POLR3F
DZANK1
DYNC1LI2
CACTIN
NME6
NUP205
FAM187A
EFTUD2
CCDC103
MAPKAPK5
NEUROG3
PSMG2
CEP76
TAOK3
SUDS3
RPL21
NUP85
MRPS7
MIF4GD
GGA3
VDAC2
NVL
DCTN1
HSPA9
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
POLR2E
GPX4
C19orf48
RBKS
BABAM2
ATP5MG
SEC61B
PAK1IP1
C6orf52
SRD5A1
NSUN2
SMC2
EXOSC5
BCKDHA
ZNF576
IRGQ
ACTR10
MRPS5
S1PR4
NCLN
COX7A2L
TMED1
SLC35B1
TTC8
LOC102724770
DGCR6
PI4KB
TSN
PNO1
NEUROG1
LYRM4
FARS2
PDAP1
BUD31
GOLGA5
FARSB
PDE6B
ADK
AP3M1
NNAT
BLCAP
PES1
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
RPS23
ATP6AP1L
RPL35A
IQCG
LMLN
SFI1
EIF4ENIF1
ZNF503
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
IPO4
TSSK4
DUX4
SELENOF
HS2ST1
FRG2C
RBBP5
SART3
ISCU
CDX2
NDUFA4
USP1
HSPA1B
PSMD12
NEUROD1
ANAPC7
DUSP29
IL23R
ICE1
CDCA7L
PCBP1
UFM1
TMEM70
ELOC
C6orf47
BAG6
APOM
PROSER1
NHLRC3
PIP4P1
OSGEP
APEX1
ZNF652
DLL4
PAF1
MED29
MYRIP
SF3B3
COG4
ATOH1
MRPL11
RABGGTB
DLX4
ECEL1
XPNPEP3
ST13
DNAJB7
ST18
INSM1
GSTT4
CABIN1
RPS12
PTGES2
PIN4
VEZT
FGD6
TLE6
ZGPAT
ARFRP1
RPS29
LRR1
OR6B2
NDUFA10
RPS27A
CLHC1
PALM2AKAP2
EIF2S3
RBPJ
ARL4D
NFKBIL1
DDX39B
ATP6V1G2
FRG2
HES1
GALNT10
STIL
GADD45GIP1
RBL2
POP5
BNIP3
RPL7
RDH10
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
DNAJB8
PCBD2
GPR108
TRIP10
DTNB
LPIN1
ID3
ZNF746
H2BU1
H2AW
RAB11B
MRS2
ANKLE2
NEUROG2
WDR6
SHB
GADD45G
ANKRD1
MBTPS1
MRTO4
EMC1
ACOT2
PDE12
SEC11C
STK36
RNF25
PAH
ASCL1
PRUNE2
DAPL1
UNCX
FGFRL1
ZNF664-RFLNA
ZNF664
CCDC92
FZD8
GBX1
LEFTY2
SEC22B
PMAIP1
PDHX
APIP
HESX1
CCDC33
MSX2
MAGEA11
TLE2
SKIL
NFE2
EHF
GTF3C4
DDX31
AXDND1
RYBP
CNTLN
NKIRAS1
NR1D2
LARP7
ARHGAP11A-SCG5
ARHGAP11A
KHDRBS1
ZNF704
APLN
ALKBH5
TPRA1
ZNF585B
ZNF383
SUCLG1
KCNN4
PLA1A
MBNL2
RPN1
MSX1
FRAT2
NXPH4
SPIN1
OPA3
FOXC1
SCIMP
MUC20
DUSP6
MAL
ZNF649
TIGD1
EIF4E2
PAX8
CDC73
ARHGEF38
MAST2
ACOT1
CDH18
ID2
RARA
LIG3
GABRB2
TLE3
SYT12
PHACTR2
TVP23C
UBE2I
SPCS1
GLT8D1
FAM151B
ZNF608
LYPD6B
OAZ3
TRPM3
DOT1L
AP3D1
CNTN4
SRSF11
LRRC40
MEOX1
UPF3A
SLC25A6
S100A10
TMEM242
GSR
CCDC200
CCDC102A
RTL10
GNB1L
FOXP1
METTL24
SKOR1
LIN28A
LMO4
FTL
BAX
CNPY2
GC
RAN
CERKL
TPM1
MELTF
KDM6B
HOXB9
RARB
NKX2-6
LHX2
RIMS1
MIER1
DNAI4
RUNX1T1
ATG10
BCAT2
BFSP1
RAD54L2
RSPO4
RBBP7
SYTL1
OTX1
ASB6
TCP10L
OTX2
NEFH
METRN
ANTKMT
B3GNT4
KRTAP2-3
KRTAP2-2
KRTAP2-1
KRTAP1-1
KCNK2
CALM2
CDX1
TMEM275
TMPRSS7
DMBX1
PRSS22
PRSS47
NTNG2
GSX1
CYP26A1
AP1B1
CBX4
TULP1
TBC1D8
PDHB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TMPPE
GLB1
SLC39A7
RXRB
HSD17B8
COL11A2
DUSP4
TAP1
PSMB9
SLC22A24
MINK1
GATA4
LCOR
PKDCC
SYNJ2
MKRN2OS
MKRN2
RPS10-NUDT3
RPS10
KAT6B
USP17L21
USP17L20
USP17L12
USP17L22
USP17L11
USP17L19
UBXN11
CD52
VIP
KCNIP4
NKX2-3
BRWD3
KIF21B
USP17L18
USP17L17
HOXB1
AZIN1
INKA2
MTCH2
ADM
FAM118A
APBB1IP
BANP
CLEC10A
PHLDB2
ZNF850
FBXO32
NAGLU
DUSP14
C15orf61
BUB1B
SOWAHA
SHROOM1
CCDC174
SLIT1
C5orf63
WDR74
STX5
DDX3X
WNT1
KRT8
KRT18
TNFRSF19
ELF3
PCLO
MNT
OTP
SDK1
PPL
ST6GALNAC3
COCH
ZNF444
CCND3
ACKR3
SERTAD2
TRIM65
MRPL38
SDF4
B3GALT6
SMARCA4
C1QTNF12
KMT5A
HOXA3
HOXA2
SNX1
CIAO2A
BICRA
GTF3A
RPL22
RNF207
EFEMP1
CADM3
CPVL
CHN2
STRADA
FOXP2
KAZALD1
SNAPC1
LYPD1
KLF17
SNRPA
C19orf54
LPCAT3
FRMD7
BCOR
MLH1
EPM2AIP1
EIF4H
IRX4
RPGRIP1
CDC42EP1
LGALS2
UNKL
C16orf91
RAB17
SOAT2
IGFBP6
SLC4A8
GALNT6
RBM26
GRHL2
LEKR1
HNRNPD
ZNF891
ZNF10
ZFP37
MEF2B
TSPEAR
KRTAP10-12
SMAGP
NRDE2
SEPTIN2
HDLBP
TEAD3
HECTD3
OTUD7B
REC8
TRIM46
KRTCAP2
PNPLA1
NCOA2
ZMIZ2
H3-3A
KMT5C
SSPN
RNF32
PCDH8
MYSM1
CNR1
PLEKHA6
TMEM88B
ANKRD65
CLDN9
TCHP
CLDN6
SLC30A4
TCF7
SMAD7
CPB1
SCAMP4
ADAT3
TACC1
KCNJ4
CLDN15
FIS1
CNPY3
PTCRA
JAKMIP1
WNT3
COL23A1
SYTL3
DYNLT1
ZNF436
ATP6V0A4
FEZF2
MACROH2A1
JAK1
MACF1
TTC13
ARV1
TAS2R9
TAS2R8
TAS2R7
HOOK2
MTRNR2L1
UBXN7
HOXA1
ZNF397
VENTX
TMPRSS4
SMIM35
UTF1
METTL11B
BRWD1
JUP
ZSWIM1
SPATA25
NEURL2
CTSA
ZNF395
FAM53B
PCDHAC1
AQP7
SYBU
PDPK1
CEMP1
USP44
AGO1
SYNE2
TIPIN
PTCH1
USP17L13
USP17L10
RHOBTB2
NR2C1
STX18
PTPRF
PPCDC
USP17L15
AHSP
SUSD3
MARVELD3
KCNB1
KMT2A
NRG1
SH2B1
PCTP
CDS1
RPEL1
PPP1R1B
SEMA6D
GATA3
IL12RB2
NEUROD2
PEX14
DFFA
CYBRD1
KRTAP12-1
CA12
ARF1
PLAGL1
SERPINF1
CFC1
IL17RD
PPP1R35
ZCWPW1
MEPCE
RPS24
POLR3A
MECOM
ZBTB40
ATG9B
ABCB8
CAV3
ESRRG
EOMES
BEND4
OR51T1
PHB2
MAPRE1
TMEM167B
FBXL4
SERTAD3
MAPK12
MAPK11
CERS2
ANXA9
GYG2
URM1
TMEM259
CNN2
AEN
RUSC2
KCNN2
LIPC
PIK3R3
SH3YL1
ACP1
KCNS3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
STON1-GTF2A1L
LYRM7
HINT1
MDM2
BAMBI
PRELID3B
AKAP10
GJA10
CLEC4G
FOXA2
COX5A
ADAM17
ERI1
ERRFI1
SOD2
ACAT2
TARBP2
NPFF
MAP3K12
PRKD1
ZBTB25
ZBTB1
SLC35E3
ZC2HC1C
ACYP1
SMIM22
ROGDI
PKIB
ERFL
LIPK
EVC
EVC2
NELFA
PRDM10
TNRC18
NANP
TRAP1
ZNF248
ZSWIM4
YOD1
PFKFB2
SLC2A9
RPIA
PLXNB1
NFATC1
CS
RPLP1
CNOT2
UFSP2
C4orf47
KDM3A
IGF2BP3
CTF1
BCL7C
CENPBD1
DNAJB5
RBBP8NL
BTBD3
PFN2
MRPL34
DDA1
ABHD8
LIX1
YTHDF2
CRYBG1
MAP2K3
CPLX2
CDC42EP3
SLC40A1
METTL27
LGALS4
ZNF90
CLGN
NFIC
CDC42SE2
ZSCAN30
KDM4C
GBX2
BBS9
KCNQ4
MINDY2
PLA2G4D
ING1
CARS2
PSMA7
KDM7A
SGK1
GPC6
LGR6
EBLN1
BOC
PIGU
PTPRG
CATSPERG
RBMS3
CLK1
FAM162A
CCDC58
CTSZ
IKZF2
NTAN1
RIC3
CPLX1
RPS3A
DHRS3
FAM110A
METTL25
CCDC59
ZDHHC17
UBL3
ANKRD63
ETFDH
C4orf46
KAT6A
CTBP2
FBN2
ACTB
C11orf96
TMEM211
GATD3B
GATD3A
INHBE
GLI1
PLAAT4
NRG2
PDZRN3
TNS3
FRMD4A
ICMT
HES3
FKBP1A
CXXC4
RGPD8
RGPD5
EIF5
ORMDL3
GSDMB
TEX12
BCO2
KLHL4
DONSON
PEX2
HES7
ALOXE3
VIPR2
PDE4D
RIT2
ZNF485
ZNF341
MDK
HCAR3
HCAR2
ABLIM3
SNX3
NOMO3
ABCC6
ZBTB17
NOL4
ZBTB20
BMPR1B
RAPH1
HIC2
SIGIRR
STAT1
ZADH2
TSHZ1
HSPA4L
ZNF827
TRIM56
LAD1
PPP1R13B
FSCN1
CMTR1
RPS8
SYDE2
INHBB
EPS8
TRIP12
FBXO36
RILPL1
SLC11A2
ZFAND6
TBX19
NEK1
CLCN3
NAA40
NPNT
GOLM2
IGFBP2
RHOBTB1
NOTCH2NLC
ARHGAP10
NOTCH2
G6PC2
HOXA4
ZP4
NR2F1
SERINC5
RAB11FIP1
GLRA1
LBX1
LZTS1
ETS1
NHS
PDE4DIP
ZFHX4
ADNP2
ARID3C
RHBDD3
EWSR1
DCTN3
HOXB3
NBAS
FXYD2
ADAM18
ITGB6
PHOX2B
DDAH1
CCN1
TMEM120B
MAMDC2
PRRX1
FABP7
CITED2
TLE4
MYLK4
SP5
CERCAM
ANK2
FGF19
MAB21L2
ASXL3
LRATD2
NAV3
KDM2B
ARID3B
TMEM107
ME3
FAM222A
MEIS2
HOXC6
RGS12
CNTN1
MALRD1
ID1
NFIA
SMPDL3A
HOXC4
CBFA2T2
DSCAML1
MTRNR2L2
MSH3
DHFR
MRPL3
SP2
GRSF1
HOXB4
EXOC2
PPFIBP2
ARSG
KDM8
RIMKLB
NCOA7
LAMA4
CR1L
TRABD2B
DMRT3
RPL34
PRDM12
HOXA5
HOXD3
NOTCH2NLB
NOTCH2NLA
TBX3
RASSF2
PAX6
IFI16
SH3BP2
PARP11
EVA1A
HOXC5
INAFM2
BRINP1
IER3
FLOT1
NDUFS7
NEK3
FGR
PYDC5
TCF7L2
SH3BP1
PLEKHO2
ALDH1A2
RFX2
METTL3
SPATC1L
ARHGAP24
DBX1
RNF149
PDP2
SCGB1A1
TMEM14A
ERLIN2
SULF1
OR10AC1
PSMB5
LYL1
MVB12A
CACNA1D
HIP1
PRDM6
SPG7
VOPP1
HNRNPA2B1
CBX3
HUS1
HEXIM2
CMTM7
ETFBKMT
PANK4
HES5
ARID5A
TESC
ABCG2
NEO1
TLE1
SEC14L1
TMEM212
ZFHX3
EAPP
KCNAB2
JAK3
STK38
MYBPC3
NUTM2D
FBXL18
PARK7
HSPA1L
HSPA1A
TBC1D10C
PPP1CA