ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◣ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
MAPKAPK5
ZNF335
PSMD1
CACTIN
LOC102724770
DGCR6
ZNF503
DUX4
DYNC1LI2
EXOC2
NME6
POLR3F
DZANK1
RWDD1
MAB21L2
PRDM6
TAOK3
SUDS3
VTI1B
PSMG2
CEP76
IPO13
NUP85
FAM187A
EFTUD2
CCDC103
S100A10
VDAC2
NVL
GATA4
STAM2
HOXA1
HOXA2
LYRM4
FARS2
SKP1
HSPA9
S1PR4
NCLN
GOSR2
TBCK
AIMP1
UBXN10
PLA2G2C
PDE4DIP
UPF2
DCTN1
SRD5A1
NSUN2
POLR2E
GPX4
NUP205
ATP5MG
IMPG1
CCKAR
SP2
IFI16
PYDC5
IER3IP1
TSN
REXO1
EXOSC5
BCKDHA
COX7A2L
MRPS7
MIF4GD
GGA3
SEC61B
FRG2C
NNAT
BLCAP
C19orf48
STAM
MRPS5
TSNAX
ACTR10
ICE1
NTRK2
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
SUPV3L1
HADHB
HADHA
BBS9
PES1
FAM104A
C17orf80
HOXB3
HOXB5
RASL12
KBTBD13
DMD
PI4KB
HAND1
PAK1IP1
C6orf52
SFI1
EIF4ENIF1
RABGGTB
CAND1
USP1
MECOM
ZRANB2
ZNF576
IRGQ
ETFBKMT
XPNPEP3
ST13
DNAJB7
RBKS
BABAM2
ADK
AP3M1
RPL34
UBE2I
SMC2
ANAPC7
CELF4
HAND2
SCRG1
MOG
UFM1
RPS23
ATP6AP1L
TM9SF1
IPO4
TSSK4
ADAM18
LAPTM4B
DPH6
RPS12
RUNX1T1
RPL35A
IQCG
LMLN
METTL3
CCDC33
LRRN4
CAPRIN1
ERI3
NDUFA4
SF3B3
COG4
CD34
SART3
ISCU
PCBP1
MYO1B
PAF1
MED29
TBX2
SELENOF
HS2ST1
MVB12A
BST2
PROSER1
NHLRC3
NFKBIL1
DDX39B
ATP6V1G2
RBBP5
SUCLG1
CLGN
NFIA
MRPL11
TNC
TMED1
RPS27A
CLHC1
NEO1
LMO4
PIP4P1
OSGEP
APEX1
OR6B2
NDUFA10
SIRT4
C6orf47
BAG6
APOM
TBX3
KITLG
NR2F1
COMMD1
CCT4
OAZ3
TXNDC2
HOXC6
HOXC4
HOXC8
VPS13A
OBP2A
CITED2
RTL1
SFRP1
DDAH1
CCN1
DMAC1
ELOVL6
MEIS2
PPP1R1B
HEXIM2
KDM2B
HOXA3
HOXA4
ARL4D
HSPA1B
HOXA5
PTGES2
PDE12
POLD2
MYL7
CD244
OR5K2
UNC5C
RARB
BICRA
NTAQ1
MRTO4
EMC1
SLC3A2
CRABP2
SHOX2
RSRC1
PRXL2A
C10orf82
ANKLE2
TEX9
RFX7
PLCZ1
CAPZA3
BRINP1
HES1
PLEKHG1
LIN28A
MEIS1
PDAP1
BUD31
NDUFV2
ZAP70
LZTS1
GGCT
FAM200B
PLEKHF1
STK36
RNF25
CCDC183
SKIDA1
TMEM141
DACT2
CCR9
EIF2S3
PRUNE2
PLAGL1
TLE3
DIAPH3
NUBP1
JUP
MELK
CXXC4
HPCAL4
TMEM120B
FOXP1
TAFA3
KRTAP23-1
KRTAP9-7
PDE6B
CPA1
ARID3C
DCTN3
LIX1
ZNF608
RPL7
RDH10
PIN4
CYP26A1
FAM205A
ZFHX4
SNCG
MMRN2
HOXB1
ST3GAL6
MGST1
METTL24
SKIL
SLC19A2
WT1
SSH1
TAF9
RAD17
AK6
ZNF157
TPM1
GPR84
PPFIBP2
RARA
TTI2
EMP1
KCNN4
SERHL2
P2RX6
FRG2
CNR1
NXPH2
FGF5
ASPG
ADAMTS8
ZNF3
COPS6
PAX3
ACKR3
ZBED5
REEP5
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
HIP1
TYRO3
ID2
MRTFB
NQO2
ERVW-1
PAEP
FLVCR1
SPATA45
FOXP2
SEH1L
PPFIA2
HOXB9
COLEC12
EXOC1L
TLE2
NIBAN1
MEOX1
TMEM14B
ZGPAT
ARFRP1
CATSPERG
PACRGL
FLRT3
PGPEP1L
ITPRID1
KIAA1217
KRT24
RPN1
POP5
FYB2
SPECC1L
RPLP1
ARHGAP10
USP34
ZNF587B
SYNE2
LRIG3
LYPD1
GADD45A
SOX5
KCNJ3
SEPTIN9
NEMP2
CCDC200
GC
FGF7
PLCH2
CNPY2
PKDCC
RPS24
POLR3A
SPTBN1
HOXB8
HOXB7
GOLGA8K
TMEM107
BNC2
GK2
TUBB
MDC1
SCMH1
SYCP2
PPP1R3D
FAM217B
TXNDC16
C8orf34
SH3RF2
MAGEB3
MAGEB2
ARF1
ACVR1
OLFM1
TNP1
C4orf54
RBPJ
IL23R
NDUFS7
HOXC5
TPBGL
GPR20
EIF3D
CDH18
CFLAR
PEDS1-UBE2V1
PEDS1
POLR2D
MME
KDM3A
CYP51A1
KLF9
ZBTB8OS
RBBP4
PCDH18
GABRB2
PKIG
SERINC3
RPS29
LRR1
RAPGEF3
SLC48A1
PRTG
KRTAP13-1
FXYD2
DSCAML1
ZBTB18
TXNRD1
HOXD3
PHLDB2
GADD45GIP1
HOXA6
IL6ST
AKR1B15
STX11
PCDH15
SLC25A25
SPRR2F
SLC17A4
TLE4
CCDC174
ANAPC15
HLTF
EXPH5
SMAD3
SAMD11
ITGA3
SACM1L
FBXO34
GAS2
CNTN1
SALL4
AKAP12
CCDC73
CLDN14
RND3
SMUG1
UBL4B
ABCC9
SPDL1
PPIC
ZFHX3
MNT
PKNOX1
POLDIP3
SVOPL
SEC11C
TMEM14A
NAGLU
MMP28
ADRB3
OR6V1
FEM1B
EVPL
COLQ
METTL25
CCDC59
TMSB4Y
KANK1
ZSWIM6
FZD8
CBFA2T2
POU2F1
TIGD4
ARFIP1
SH2B1
NBAS
MYPN
FAM72D
FAM72C
CDH15
OBP2B
AQP1
COPRS
H2BC5
H1-4
CTNNB1
COX7A2
GOLGA8H
PDZRN3
AKAP13
AGBL3
FAM81B
TCF7L2
PSMB5
EYA1
TAF12
MROH7
ERCC1
CDC42EP3
SLC22A5
CDIN1
CPHXL
VANGL2
CACNG1
GPR82
SIPA1L1
GORAB
ZNF585B
ZNF383
REC8
OPA3
TNFAIP8
ECHDC1
CAPN7
FGF8
DCAF4L2
NPM3
RAPGEF4
RIPOR2
HERC6
TBX18
SVEP1
IGF2BP3
SNX16
HMCN2
C9orf153
GTF3C4
DDX31
HUS1
PPP1R21
CDC73
ASB15
COPZ1
EGFLAM
SRP9
RNASEH2B
CCN2
MPDZ
NELL2
SLCO2B1
BCL11B
ZNF397
GFRA3
RASSF4
SCHIP1
SORBS2
PPFIBP1
RAPGEFL1
C1orf105
AMACR
PIGC
SPRY1
SFXN3
PDZD7
NNMT
PGF
CHST9
GUCY1A1
MXD1
CLCN5
RBMS3
TRPS1
GLS2
SST
BOD1L2
SPIRE1
DHRS3
HMX2
BUB3
RBM20
COMMD8
C12orf50
C12orf29
MXRA7
RAPGEF2
MAPRE3
OSBP2
GYPC
PFKFB3
CEMIP
NFIB
RCOR3
FSIP1
MRPL52
SLC7A7
ZNF341
FAM131B
ARL6IP5
UBA3
ZYX
FAT2
CADM3
HEY2
HMGCS2
MCF2L2
NDRG4
MTUS2
SMURF1
SMIM28
ERCC4
ACY3
PDGFRA
NRG2
XRCC5
LIG4
ABHD13
SIGLEC15
SCOC
ARHGAP42
NEBL
WDR82
GLYCTK
PGK1
CDK6
OLFML2B
ASXL3
ZNF77
JCAD
CDK20
YWHAZ
RNF111
TMCC3
MYLK3
MAGEA11
NKX2-6
R3HCC1L
ZNF430
ID3
TNFRSF19
KCTD7
GDPD5
LIPC
ZP3
NT5C3A
GNGT1
C6orf132
AK2
HAPLN1
XPR1
TMEM185A
USP17L21
USP17L20
USP17L12
USP17L22
RAB17
KIF4B
LARP7
ZNF746
HNRNPD
PBX2
GPSM3
OTUD4
AGER
NME4
PGAP6
RPL22
RNF207
INPP4B
RERG
PDE6A
TYRP1
WDR74
STX5
IER5
ANKRD33B
ZNF611
CCDC175
ALKBH5
EAPP
SLC7A5
SEBOX
IRS2
APP
VTN
SARM1
TULP4
RCOR1
LMOD1
SYNJ2BP-COX16
SYNJ2BP
VOPP1
ATP6V0D2
MAD2L2
MRRF
PRICKLE1
DRAXIN
GOLGA8T
NR4A2
CACYBP
THRA
ARHGAP19
ANXA11
BTBD16
FHL2
BNIP3
GATA6
TCF4
MGST2
ABCA4
LRRC36
FBXL18
ACTB
SALL3
PLA2G2E
FGA
CNMD
DUSP6
SHB
MGAT1
SSBP3
CFAP69
CEP70
TRIP12
FBXO36
CD248
AMOT
SLC9A3R1
RAB37
SLC19A1
ESRRG
CDK15
SERPINA7
PCNX4
ZNF853
PGLYRP1
IGFL4
TSSC4
NME1
CDH3
WDFY3
NDUFB3
FAM126B
ENTPD4
ABLIM3
SERTAD2
ZNF280D
MID1
ZC2HC1C
ACYP1
RALGPS1
MUSK
MYOM2
RPS4Y1
PKP2
KRT8
KRT18
NR2F2
ZNF367
DLG2
CRKL
ELAPOR2
ZSCAN30
RFPL1
CS
MEGF6
ITGBL1
OLFML1
SLITRK6
KIF2C
ALPK2
PCBD2
CPPED1
DNAH12
HSPB3
MPPED2
ASB6
CNTNAP5
WWP2
TNNT2
STOM
SPRED2
BNIP2
IL1RAPL1
MIER1
DNAI4
NCAM2
PDHB
CLASP2
ATXN2L
CEP41
MMD
SNX8
SLC25A6
CHODL
PLAAT2
MEIS3
PDCL3
CSRP1
MLIP
F3
C9orf92
HNRNPA2B1
CBX3
FNDC5
SUPT7L
SLC4A1AP
KAT6B
UBE2H
CELF2
QPRT
SLC28A3
CTF1
BCL7C
KCNJ14
GRWD1
ACVRL1
ADAMTS3
NOTCH2NLC
NOTCH2
TGM2
DIP2C
CLIP3
SSUH2
ELK4
RANBP17
GFRA1
RGS5
ARHGAP28
BARD1
PAQR8
PMFBP1
DGKZ
SEC24A
DNAJB4
ALX1
ART1
ART5
TLE6
NEUROG2
NEUROG3
WNT1
DUSP29
ICMT
HES3
MBTPS1
CDX2
VEZT
FGD6
G6PC2
PMAIP1
ZP4
ATOH1
SERINC5
NEUROG1
PALM2AKAP2
RAB11FIP1
GLRA1
LBX1
IGFBP2
NEUROD1
INSM1
LEFTY2
ETS1
NHS
ADNP2
RHBDD3
EWSR1
UNKL
SOAT2
IGFBP6
MUC20
URM1
DAPL1
CDCA7L
PDHX
APIP
C16orf91
ITGB6
DLL4
PHOX2B
UNCX
DLX4
ST18
MAMDC2
SYBU
PRRX1
SEC22B
MSX1
FABP7
ECEL1
MYLK4
TPRA1
SP5
CERCAM
ANK2
FGF19
NFE2
LRATD2
NAV3
ARID3B
ME3
FAM222A
TMEM70
RGS12
ELOC
GPR108
MALRD1
MYRIP
ID1
TRIM65
MRPL38
PAH
ASCL1
SMPDL3A
ERRFI1
RBBP7
GADD45G
TRIP10
MTRNR2L2
MSH3
DHFR
MRPL3
GRSF1
HOXB4
DMBX1
IL17RD
ARSG
KDM8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RIMKLB
KAZALD1
NCOA7
MTRNR2L1
LAMA4
CR1L
MSX2
TRABD2B
DMRT3
PRDM12
KMT2A
NOTCH2NLB
NOTCH2NLA
SNAPC1
OTX1
FRMD7
RASSF2
PAX6
ZNF652
BFSP1
SH3BP2
PARP11
MRPL34
DDA1
ABHD8
LPIN1
EVA1A
INAFM2
IER3
FLOT1
NEK3
FGR
SH3BP1
PLEKHO2
ALDH1A2
RFX2
MBD2
TMPPE
GLB1
SPCS1
GLT8D1
CBX4
FKBP1A
SPATC1L
ARHGAP24
DBX1
RNF149
PDP2
AXDND1
UPF3A
SCGB1A1
ERLIN2
SULF1
OR10AC1
LYL1
METTL11B
C5orf63
CACNA1D
SPG7