ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPG7
IER3
FLOT1
SKI
ID1
PLCB2
NADK
NFE2
TBL2
INAVA
PRAM1
LAT2
LAPTM5
NCOA2
HMGCS1
PPCDC
ZNF414
SKIL
NAA10
ARHGAP4
UNC13D
WBP2
MTRNR2L2
MSH3
DHFR
RNPEPL1
DUSP28
ANKMY1
GRAP
LFNG
CD38
GRAPL
LCOR
MYO1F
NFILZ
C5AR2
RNF166
CTU2
STX1A
GFOD1
NIBAN3
CXXC5
CBX4
CCL2
MEF2D
HSH2D
MYRF
DHRS3
AHNAK
MMP17
GRK6
SPATA1
GNG5
RAD23A
CALR
FARSA
MTRNR2L8
TUBA1C
PDCD6IP
MIDN
PCNA
CDS2
CRTC1
ARHGAP45
DLG1
RASGRP2
COL4A2-AS2
SQSTM1
DZIP3
CIP2A
MATN1
TKT
PDE4B
MBD6
DDIT3
CSF3R
SMUG1
MAP2K3
SH3BP2
ITGB2
FGR
INSIG1
COX20
ARID3B
MYO1G
RHBDF2
CSK
HIP1
IDH1
UPF3A
SIRPA
CTSD
ARIH2
RPS6KA1
P2RY2
DBP
SPHK2
TPPP3
KIF21B
DOT1L
GFI1
CENPH
CCDC88B
WDR74
STX5
ZNF718
ZNF595
FMNL1
LRTM2
ZCCHC24
ZC3H12A
BMF
IRF1
HNRNPF
NFKBIA
KRI1
CDKN2D
ASB2
NRL
DCAF11
FDFT1
PKLR
FDPS
RPS9
RASSF4
MKLN1
DEPP1
TRERF1
ZNF775
S100P
NFIC
KAT6B
OLIG1
ZFYVE28
CFAP99
ATP8B4
SSH3
MRAS
ADGRE2
NLRP3
LYL1
ARHGEF2
TOX2
MYBPC3
ICAM1
BAZ1B
CD79A
PRKCD
RNF157
SULT2B1
DENND4B
PITPNM2
RASSF2
MYEOV
C16orf54
SLC25A19
TGM3
LIMK1
BBC3
ADD1
BCL3
RBM15
GPAA1
EXOSC4
SYTL1
RAB11FIP3
DRAP1
C11orf68
CD300A
C11orf91
KAZALD1
ARHGEF18
DNAJB1
SH2B3
MSMO1
KRAS
TCAP
PNMT
PSMD3
PKN1
POC1B-GALNT4
POC1B
GALNT4
EMP3
CCDC114
TMC8
TMC6
KEAP1
LRPAP1
ZNF740
CSAD
CD248
SHISAL2A
SEC14L1
SNX15
CCND3
FADS3
ATG16L2
S1PR2
RARG
TMEM205
RAB3D
CCDC159
HCRT
GHDC
CTBP2
CCDC57
RUNX1
TMEM104
NAT9
SRGAP2C
SRGAP2B
LYST
CEBPE
INAFM2
CYBA
AZU1
PRTN3
BHLHE40
RAB11FIP1
MRPS31
NRG4
EMILIN2
BIN2
ATP23
NUP210L
HUS1
SMARCD2
ARID2
SREBF1
METTL26
MCRIP2
WDR90
CCDC102A
ADGRG5
RNASEH2B
CEBPA
SPDYE12P
NDUFA4
EPM2A
PIK3AP1
ZSWIM1
SPATA25
NEURL2
CTSA
PACC1
NINJ2
TBL1XR1
AGTRAP
VSIR
PDE12
TRIB1
LRMDA
RHOC
GALNT9
HES1
C15orf39
PDE6B
SMIM20
ARL5C
HMGCR
RAC2
ITGA5
CDCA7L
LRP3
NPEPL1
CLEC3B
EVL
LGALS1
NOL12
PGAM5
DUSP10
SLC47A1
TCTEX1D4
PLK3
BTBD19
SLC35D1
PKM
C10orf105
RPS6KB2
PTPRCAP
E2F3
CORO1B
GRK2
NCR3
LTB
LST1
SLC22A18
H4C12
H4C11
H2BC14
H2AC14
NOL4L
P2RX5
ACTL9
PMF1-BGLAP
PMF1
KCNH2
SETD1B
MNT
GSE1
FERMT3
LHX3
RHOF
ELANE
CFD
PELATON
YARS1
S100PBP
UBE2E1
MTRF1L
ARHGAP35
AP2S1
H6PD
NR2C1
IMPDH1
DUX4
TM4SF19
ARRB1
PLAU
KRT8
VENTX
AP5B1
C5AR1
CYP51A1
RAP1GAP2
GYPC
SPDYE13
IGSF10
CITED4
SPRED2
FASN
EVA1B
ALOX5AP
FCGRT
MAMSTR
SPDYE9
SPDYE8
SPDYE15
SPDYE11
ANKRD13D
KCNE3
SEPTIN9
KIAA0513
SH3BP1
ASB1
TNFRSF4
TNFRSF18
MGAT4B
SH2B1
CCDC174
TRIM8
SCUBE1
MAP1S
CHST13
SUPT4H1
MID1IP1
SLC38A10
ZNRD2
FAM89B
EHBP1L1
MYBPH
OAZ1
HSP90AB1
LMLN2
PLIN2
LMTK3
JUP
TRIB3
HIVEP1
RAB37
TANK
EIF1B
SLC9A3R1
SQLE
SOAT2
IGFBP6
GPCPD1
ADGRG3
RBBP5
ANP32E
CASTOR1
NCF1
DUS1L
SMCHD1
B4GALT1
GMEB2
ZNF746
UPP1
USP3
PARP9
DTX3L
PARP15
MXI1
GBE1
RAPGEF1
STN1
HECTD3
SPDYE17
MLXIPL
PECAM1
TYROBP
NFKBID
HCST
FAM131B
ZYX
AEBP1
ARL4A
IFNGR1
CD1D
IGF2BP3
NUFIP2
PKN2
STRA6
ATF3
EXTL1
MTRNR2L1
ZASP
SAP25
WDR43
ADPRHL1
PDP2
H4C14
H3C15
H3C14
H4C15
MAP3K8
PIWIL4
TPRA1
PPP1R27
MCRIP1
PWWP2B
PIKFYVE
ATP6V0D1
AGRP
GPR132
ETFBKMT
SMG6
TAGLN2
C12orf75
SLC12A6
NUTM1
NOP10
RCAN1
MSRB1
IL1RL1
RNF103-CHMP3
RMND5A
PEAK3
PLEK
UMODL1
ZDHHC19
SLC51A
TBC1D10C
PPP1CA
CTTN
LPO
PIK3CD
SLC16A3
SLC1A5
LY6E
NFIL3
DENND2D
TSPAN16
PPP2R5B
ATG2A
GRIFIN
TLR9
SIGIRR
SIPA1
RAVER1
ICAM3
RHBDF1
MPG
CTDSP1
GPR160
GTF3A
CPSF4L
GPR146
C3orf86
TBXA2R
CA11
SCAMP4
ADAT3
ABHD17A
SELPLG
RARB
MINDY2
NUP210
CDK13
SEC11A
SH2B2
ADAP1
NR4A1
TNFRSF10B
TAMALIN
ADRM1
KLF16
PDE8A
PLEKHO2
GMIP
S1PR4
NCLN
ZC3H4
DENND6A
LDLR
GLIPR1L1
CAPS2
SNX33
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
FXYD2
DSCAML1
S100A2
OPA1
TOP1MT
TRAPPC5
MCEMP1
NKIRAS1
NR1D2
CYB561D1
ATXN7L2
TCF3
F11R
BCAP31
ABCD1
RCOR2
STX10
IER2
UBALD2
BAZ2A
LRPPRC
KIF5C
PDCD4
ARID3A
DCTN4
KISS1R
AXDND1
DDAH2
CLIC1
MSH5
PCYT1A
MTRNR2L9
SCD
IQGAP2
CTCF
ZNF217
DGAT2
ATP2A3
FOXK1
LOC388282
KIFC3
EFHD2
TMEM101
FBXO41
EGR4
ACACA
KCNAB2
TXNRD1
CD82
PPARG
TSPAN32
C11orf21
TRPV4
OSM
PCNX3
MAP3K11
P2RX1
WNT1
WNT10B
GPATCH8
FLNA
UBC
SLC17A9
TREM1
TRPM2
KLF9
MVK
SPDYE5
POM121C
PPIAL4H
PPIAL4C
PPIAL4A
CCDC154
NAMPT
KCNIP1
STEAP3
RBKS
BABAM2
PPP1R18
NRM
DHX16
SH2D3C
CDK9
CIRBP
KLHL24
IFT52
SLC12A7
MUC5AC
MYADM
CLTC
PHF19
MRGBP
NCOA4
IFITM3
FOS
VASP
KBTBD2
HRH1
FGGY
RGPD2
RGPD1
CFAP100
CBFA2T3
PARL
NDRG2
ARHGEF40
ZDHHC17
AVPR2
ZBTB7A
ATP13A2
PDLIM7
DIO1
ANPEP
LY6K
MICAL1
CHPT1
IRF2BP1
MTHFR
CLCN6
CCDC9
IRF5
LZTS2
PLEKHO1
ASIC3
TMEM143
SYNGR4
SPDYE16
ZNF276
VPS9D1
PRNP
KLHL36
VPS72
PIP5K1A
CCL20
EIF4A3
GNG4
VOPP1
UBE2J1
PLEKHA8
FKBP14
CRYBG1
FAM180B
TAC4
BCL2A1
CALHM3
C1QTNF4
DUSP7
TRIM11
TRIM17
ZGPAT
ARFRP1
EPN1
PMPCB
ICAM5
ICAM4
RHOQ
ATP6V1E2
TAF1A
PTCD1
CPSF4
MPO
BPI
FCN1
SSBP4
C16orf74
ISYNA1
LONRF3
PTPN6
C12orf57
OGFOD2
ARL6IP4
ABCB9
TBC1D14
ATR
COPS7A
TMEM91
QPRT
HBP1
H4C13
H3C11
H2AC16
H1-5
NEU4
SP1
B3GNTL1
RAB27A
LINGO1
PPIAL4G
MTF2
TEX2
B3GNT5
B9D1
ANK1
MFAP4
MAPK7
MRI1
C19orf53
TYK2
NOG
ZSWIM9
LIG1
GALNT7
LPCAT3
NUDT15
ZFP36
PLEKHG2
TOR4A
ADM
STK35
CCDC9B
STK3
FSCN1
TFAP2A
RHOH
HSPH1
VIPR2
OSR2
AMY2A
GOLIM4
ZNF584
OAF
RHEBL1
KMT2D
LIMD2
CAMP
ENG
CPQ
SLC9A5
FHOD1
PPRC1
QRICH1
CRISPLD2
CPXM1
PIP4P2
ITPRIP
FRA10AC1
PLEKHA2
MRPS15
H3C4
H4C4
NFAM1
TNFRSF10A
RASIP1
IZUMO1
H2BC6
FUT1
KANSL3
FER1L5
TNFRSF1B
SRF
ZNF846
BORCS7
UBE2H
NOTCH3
LYN
CPNE5
PTEN
KLLN
DOCK2
TIMP2
PSAP
MYO18A
ATXN1
LZTFL1
SPN
MAPK12
MAPK11
EPB41L1
NTSR1
ADGRG1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RNF149
DGKZ
ARMC12
FKBP5
IL32
LRRK2
METTL25
CCDC59
BANP
SKIDA1
MLLT10
HAND2
RIOK3
HDAC7
FRAT1
NIT2
EP400
GTF2IRD1
GPR108
MIDEAS
DYRK1A
LMNA
TCIRG1
NDUFS8
DHX37
BRI3BP
EPS15
ALDH2
C3
TTYH3
POLR2E
GPX4
HOXA3
HOXA4
DUSP6
HOXA5
SNUPN
NR4A3
SIRT7
MAFG
CACNA2D4
RELT
HSP90AA1
ZFAT
MYC
CDCA4
UCN2
PFKFB4
UNC13A
PPIAL4F
PPIAL4E
PPIAL4D
NFIA
ERCC1
ZNF76
ZDHHC4
PTP4A2
CDKN1A
TNFSF14
TMEM88
NAA38
CYB5D1
PLXNB2
LSG1
FTL
BAX
ATXN2
AFF1
SC5D
MARCHF2
CUL2
TXNDC5
KCNE1
DRC7
NAA80
IFRD2
HYAL3
DMAP1
UCP2
KLF10
MIEF1
NLRC3
CSPG4
NDUFS7
ING1
CARS2
FAM214B
UBR4
MAP1LC3B2
TMIGD3
ADORA3
RXRA
INKA2
SRP14
DHX33
NYX
FCRLB
VDR
FCGR1A
HAPLN4
APBB1IP
UHRF2
YWHAQ
H2BC15
H2AC15
FBXO6
FBXO44
FBXO2
PIM3
SULT6B1
SIGLEC11
XCR1
LTA4H
GABRR2
GCHFR
BCKDK
ATP11A
SPRING1
RNFT2
UNC45A
HDDC3
ITGAL
C15orf62
PEX5
RDH12
RDH11
SBF1
INTS1
PLEKHM1
ANXA4
GDPGP1
CIB1
INPPL1
FOLR2
RWDD1
CNOT2
NUBP1
SH3BGRL3
EVPLL
TM7SF3
MED21
SREK1IP1
CWC27
GFM2
TSPOAP1
STING1
CHD9
TBP
PSMB1
OPN1MW3
OPN1MW2
OPN1MW
FCGR3A
HSD17B7
ENO1
CLIC4
CCNL1
POLG
AHCYL2
TMBIM6
PPIF
CDC42EP4
SASH3
MFN2
DNAJB2
TRIM46
KRTCAP2
DAZAP1
NOTCH1
TP53I11
RAB43
ZNF254
SIGLEC7
RBPJ
KMT5A
MLEC
PRSS57
BCAT1
ZNF317
SMAD3
ARHGAP27
SCAP
TPD52L2
ABHD16B
LIPM
KDM3B
SIK1B
SIK1
GRAMD1C
TRIM14
ZNF750
NRROS
PNKD
NKG7
ETFB
CLDND2
SLC39A11
CYTH3
TNFAIP2
SAT1
MAPK8
SLC25A15
ADAM8
DYNC1I2
VGLL4
FGD3
HDGF
HMGN4
B2M
DNAJB12
KLF1
GCDH
DNASE2