ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◣ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
LOC102724770
DGCR6
MAPKAPK5
CACTIN
POLR3F
DZANK1
NME6
NVL
PSMG2
CEP76
MAB21L2
TAOK3
SUDS3
S100A10
ZNF503
EXOC2
DYNC1LI2
VTI1B
IPO13
S1PR4
NCLN
PRDM6
VDAC2
HSPA9
RWDD1
FAM187A
EFTUD2
CCDC103
NUP85
DUX4
SP2
PDE4DIP
EXOSC5
BCKDHA
GATA4
IMPG1
RPL21
CCKAR
REXO1
DCTN1
HOXA1
HOXA2
SLC35B1
IFI16
PYDC5
TBCK
AIMP1
NUP205
POLR2E
GPX4
SRD5A1
NSUN2
BBS9
SEC61B
STAM2
MRPS7
MIF4GD
GGA3
STAM
RASL12
KBTBD13
ARHGEF10L
NTRK2
IER3IP1
C19orf48
TSN
ATP5MG
NNAT
BLCAP
GOSR2
UPF2
PES1
UBXN10
PLA2G2C
ACTR10
FRG2C
ZNF576
IRGQ
HADHB
HADHA
MYO1B
HOXB3
HOXB5
VARS1
SUPV3L1
PSMD12
MRPS5
SKP1
TSNAX
RBBP5
GOLGA5
PAK1IP1
C6orf52
LYRM4
FARS2
PNO1
ETFBKMT
ADAM18
FARSB
CAND1
DMD
HAND1
PCBP1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
MVB12A
BST2
SART3
ISCU
PI4KB
ERI3
RPL34
SMC2
RUNX1T1
TMED1
RABGGTB
PLCZ1
CAPZA3
KITLG
MRPL11
USP1
ZRANB2
PROSER1
NHLRC3
COX7A2L
SF3B3
COG4
CELF4
ADK
AP3M1
TBX2
METTL3
RBKS
BABAM2
ANAPC7
ICE1
TBX3
SFI1
EIF4ENIF1
LRRN4
RPS12
CD34
UFM1
CCDC33
SELENOF
HS2ST1
TM9SF1
IPO4
TSSK4
LAPTM4B
CAPRIN1
NR2F1
MOG
OBP2A
XPNPEP3
ST13
DNAJB7
HSPA1B
RTL1
RPS27A
CLHC1
MECOM
DPH6
PAF1
MED29
MEIS1
PDAP1
BUD31
RPL35A
IQCG
LMLN
LIN28A
PIP4P1
OSGEP
APEX1
GGCT
NTAQ1
PPP1R1B
TXNDC2
OR5K2
ELOVL6
CRABP2
PLAGL1
DDAH1
CCN1
HAND2
SCRG1
SIRT4
CLGN
SLC3A2
CCDC183
TMEM141
C6orf47
BAG6
APOM
ADAMTS8
LMO4
NUBP1
NFKBIL1
DDX39B
ATP6V1G2
VPS13A
PAEP
CXXC4
HOXC6
HOXC4
HOXC8
OR6B2
NDUFA10
COMMD1
CCT4
PRXL2A
KRTAP9-7
ERVW-1
FYB2
FRG2
NFIA
HEXIM2
KDM2B
NEO1
TAFA3
TEX9
RFX7
OAZ3
DIAPH3
CITED2
STK36
RNF25
PDE12
PLEKHG1
TMEM14A
PIN4
ARHGAP10
MGST1
MEIS2
PPP1R21
FGF5
SSH1
PDE6B
ZFHX4
LZTS1
HPCAL4
SUCLG1
ST3GAL6
HOXA3
HOXA4
HOXA5
MRTFB
KRTAP23-1
LIX1
OBP2B
PAX3
CPA1
HOXB1
POLD2
REEP5
MYL7
NXPH2
DMAC1
PRUNE2
OLFM1
C10orf82
TNC
DACT2
GOLGA8K
MME
ZNF608
UNC5C
MELK
SLC19A2
ASPG
AKAP12
BRINP1
MEOX1
CCR9
ARID3C
DCTN3
PPFIBP2
ZAP70
TMEM120B
HIP1
CATSPERG
GADD45A
ACKR3
POU2F1
POP5
C8orf34
NIBAN1
GPR84
FAM200B
KIAA1217
WT1
FLVCR1
SPATA45
PKDCC
SFRP1
CD244
TLE3
SERHL2
CNPY2
SNCG
MMRN2
FEM1B
EXOC1L
PTGES2
ACVR1
TXNDC16
KCNN4
LARP7
CYP26A1
MRTO4
EMC1
ITPRID1
RAPGEF3
SLC48A1
LYPD1
ARHGAP11A-SCG5
ARHGAP11A
METTL24
P2RX6
PLEKHF1
C9orf153
FAM72D
FAM72C
SEH1L
FAM205A
ZFHX3
SCMH1
CCDC200
RARB
ARHGAP19
HOXB9
GOLGA8H
COLQ
ZNF3
COPS6
ZNF587B
CADM3
FGF7
PPFIA2
TLE4
SMUG1
PPFIBP1
SEC11C
BNC2
EIF3D
SHOX2
RSRC1
GAS2
TMEM14B
ZNF157
CNR1
TAF9
RAD17
AK6
R3HCC1L
ARHGAP42
EYA1
SKIDA1
PACRGL
RBM20
PRTG
EGFLAM
PRR13
MXRA7
ARF1
EVPL
RPS29
LRR1
GPR82
KRT24
ARL4D
MAGEB3
MAGEB2
TRPS1
HES1
TNP1
RPL7
RDH10
ZGPAT
ARFRP1
TAF12
TYRO3
PGPEP1L
CDC42EP3
FOXP1
ZBTB18
ANKRD6
DMBT1
GPR19
GTF3C4
DDX31
ZBED5
JUP
ERCC1
NT5C3A
PKIG
UBL4B
SERINC3
IL6ST
SCHIP1
TMEM9
POLDIP3
FOXP2
NEBL
RERG
RPS24
POLR3A
MXD1
SLC22A5
SRP9
FXYD2
DSCAML1
ZP3
SNX16
RARA
RNASEH2B
CPA2
ASB15
SORBS2
CFLAR
SLCO2B1
RPS4Y1
ZBTB8OS
RBBP4
TAL2
TEPSIN
NDUFAF8
EMP1
KIF4B
HOXC5
TCF7L2
NEMP2
GLS2
COPRS
TPBGL
ABCC9
OSBP2
CREB5
C4orf54
TMEM107
COLEC12
TPM1
CDH18
GNG2
FGA
MAGEA11
FSIP1
SPIRE1
GK2
SKIL
PKNOX1
SYCP2
PPP1R3D
FAM217B
ZNF585B
ZNF383
NDUFV2
FLRT3
SPECC1L
RAB30
GUCY1A1
ZNF397
ATP1A1
ACY3
CDH15
MYLK3
JCAD
CDC73
CCDC73
SPTBN1
XPR1
GOLGA8T
ID2
CACYBP
NKX2-6
TMSB4Y
KDM3A
RPLP1
GATA6
FBXO34
ZNF367
KCNJ3
AKR1B15
SLC17A4
ITGA3
DCAF4L2
TFPI
PHLDB2
SOX5
CPHXL
RPN1
SLC9A3R1
RAB37
SALL4
CDH3
GABRB2
CSRNP3
PEDS1-UBE2V1
PEDS1
EPHA8
MYPN
HOXD3
TTI2
SYNE2
GFRA3
AKAP13
PGLYRP1
IGFL4
KLF9
KCNIP2
SPDL1
CS
HOXA6
CYP51A1
NNMT
TBX4
CACNA1D
USP17L21
USP17L20
USP17L12
USP17L22
SNAPC1
PRICKLE1
IL23R
SACM1L
PDZRN3
ASXL3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CD96
STX11
ITM2C
ZNF214
NLRP14
PLCH2
GDPD5
GC
PMFBP1
SLC2A9
TXNRD1
SEBOX
SIGLEC15
VTN
SARM1
CNTN1
SMIM14
CEMIP
COPZ1
GORAB
HLTF
USP34
CDK15
PDGFRA
REC8
NR4A2
KCTD7
VSIR
MGST2
CDIN1
IRS2
TLE2
EMILIN2
TYRP1
METTL25
CCDC59
ANAPC15
BTBD16
RND3
STRA6
EIF2S3
SMIM28
CSNK2A3
SVOPL
SMURF1
HNRNPD
GPR20
COMMD8
POLR2D
APBB1
HOXB8
HOXB7
COL5A2
PDHX
APIP
TUBB
MDC1
VANGL2
RASSF4
EXPH5
MIDEAS
ENTPD4
SH3RF2
WDR82
GLYCTK
PPIC
NRP2
NME1
NBAS
NQO2
CTNNB1
SLITRK6
PLA2G2E
RNF111
METTL7A
EFNA5
FGF8
NPM3
TGM2
TSSC4
C1orf105
CBX5
PIGC
PLN
SPRY1
ZNF746
NECTIN1
CAPN7
NDRG4
TBX18
MROH7
CEP70
EDNRB
ALKBH5
IGF2BP3
CACNG4
CRKL
KRT8
KRT18
GARRE1
UNKL
C16orf91
GADD45GIP1
CALM2
ELAPOR2
PDE7A
BOD1L2
ALG10B
EVX2
CCN2
ACVRL1
WDFY3
CACHD1
IL1RAPL1
ANKRD20A1
BDP1
TENM3
NDUFB3
FAM126B
CLDN14
SLC25A30
MMP28
SAMD11
DNHD1
ADRB3
C12orf50
C12orf29
FZD8
WDR74
STX5
ID3
YWHAZ
RAPGEF2
HEY2
FZD2
DUSP9
APP
CPPED1
CHST9
DNAJB4
FBXO40
TEX19
ANP32C
HMGCS2
LIPC
NPHP3
DPP10
SLC7A5
CACNG1
OPA3
DAZAP1
MRPL52
SLC7A7
CDX2
NOL4L
SOST
ST7
CLIP3
OTUD4
IRAK3
MEGF6
FYN
MMD
PARD6B
CARD10
LRRC36
TNFAIP8
THRA
MRPL39
TRIM65
MRPL38
SEMA3E
NFIB
AMOT
CD74
LCA5
BRD3
ASB6
ZSWIM1
SPATA25
NEURL2
CTSA
ECHDC1
AGBL3
SPRR2F
C3orf52
ESRRG
TNRC18
SPRED2
KANK1
MLIP
LOC100129484
GPC3
NELL2
RBMS3
SMAD7
MCF2
SEPTIN9
TCF4
PRR5
HOXB6
ZNF644
PRR5-ARHGAP8
MS4A4A
KLF12
DZIP3
CIP2A
HSPA6
LDLRAD4
MPPED2
RNASE9
AHNAK
CD177
C6orf132
FAM81B
SH3BP4
EAPP
PPP1R12A
RIPOR2
PCDH15
TMEM185A
GTF2H5
MAPRE3
CD28
CDK20
PKIA
LRIG3
IER5
HOXA7
HOXA9
IKZF4
SIPA1L1
HMCN2
ETV1
NR2F2
TLL1
FBXL4
FHL1
PLEK2
DCN
COL3A1
SMAD3
RCOR1
SHMT2
HAPLN1
MRRF
SFXN3
PDZD7
RAPGEFL1
NHS
PCBD2
TNFRSF19
MCF2L2
MPDZ
CCND2
HMX2
BUB3
CXXC5
XRCC5
SLC5A10
RBP1
SPRED1
UBE2I
DUSP6
MSX2
RPS10-NUDT3
RPS10
TIGD4
ARFIP1
KCNJ14
GRWD1
ABLIM3
PHC2
PFKFB3
BHLHA9
GDF11
SH2B1
LMOD1
CSNK1A1
NRG2
MGAT1
TRIM24
GDE1
CCP110
SYNDIG1L
CD93
GFRA1
ARSF
IL19
IGFL2
LSM6
MCM5
RAPGEF4
KRTAP13-1
KLHL2
AK2
INPP4B
NEDD4L
FAM89A
KIF2C
CSDC2
ZSWIM6
KBTBD8
SRI
DISP1
SSBP3
KCNMA1
ARHGAP8
NAGLU
STARD13
PPP2R5B
ATG2A
CFAP69
HTR1F
PGF
FAM72A
EPN2
SOAT2
IGFBP6
SLBP
BARHL2
SHLD1
DHRS3
BNIP2
ZNF285
FAM131B
ZYX
ANKRD33B
ALX1
EFNB2
H2BC5
H1-4
XKR7
SMTNL2
ZNF703
MAML3
RAP2C
DHTKD1
ANK3
OR6V1
BCL11B
FAM83F
SYBU
USP17L13
USP17L17
USP17L15
PSPH
CCT6A
GPC6
SRRM3
PKP2
CDA
TLCD4
NKX2-5
DMBX1
ZBTB40
DST
ATP1B1
NME4
PGAP6
FHL2
KIRREL1
ANKK1
GTF3A
MYOM2
FGB
DMRT3
NEK1
CLCN3
MT1E
DLAT
ATP2A1
LIG4
ABHD13
ZNF77
RBM25
KMT2A
KRT20
COMMD10
OLFML2B
PRRT4
MUSK
PTGIS
PCDH18
PDCL3
DERL3
SCOC
VIM
SNTN
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PSMB5
LRIG1
FAT2
C6orf163
CRY1
TTC24
IQGAP3
SLC30A4
ZNF611
OVCH2
FABP2
SYNPO
USP2
TBC1D5
WDR26
SPATA13
DNAH12
UGT2B11
DLG2
UBE2H
MID1
FGD5
YTHDF2
STOM
LRRC8D
SLC25A25
AADACL4
CBFA2T2
RARG
ZNF341
CRK
RANGAP1
NINL
SNX10
SYNJ2BP-COX16
SYNJ2BP
OTUD7B
GOLM2
SATB2
RNF150
LIG3
SASH1
PRAC2
PRAC1
HOXB13
GNGT1
ZNF813
SPIN1
TBC1D9
SNX8
COX7A2
USP17L11
USP17L18
USP17L10
TPRG1L
WBP4
ELF1
ANKS1B
GYS2
PDHB
ID1
KDM6B
FBXL18
ACTB