ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584306 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◣ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2A
PSMD1
NME6
RABL2B
MAPKAPK5
TAOK3
SUDS3
RWDD1
CACTIN
POLR3F
DZANK1
VDAC2
DYNC1LI2
NUP85
IPO13
NUP205
HSPA9
VTI1B
PSMG2
CEP76
GOSR2
RPL21
POLR2E
GPX4
NVL
G6PC2
SEC61B
C19orf48
ATP5MG
NEUROG2
TBCK
AIMP1
FARSB
FAM187A
EFTUD2
CCDC103
ACTR10
TLE6
EXOSC5
BCKDHA
MRPS7
MIF4GD
GGA3
LBX1
STAM2
WNT1
HADHB
HADHA
REXO1
ZNF576
IRGQ
PAK1IP1
C6orf52
PNO1
DCTN1
SKP1
SRD5A1
NSUN2
NNAT
BLCAP
STAM
PES1
CAPRIN1
TSNAX
LYRM4
FARS2
S1PR4
NCLN
TSN
SUPV3L1
SART3
ISCU
LOC102724770
DGCR6
ARF1
UPF2
ANAPC7
CDX2
RPS23
ATP6AP1L
COX7A2L
IGFBP2
MRPL11
ZRANB2
SF3B3
COG4
FZD8
ZNF608
VEZT
FGD6
GLRA1
NEUROG3
PCBP1
XPNPEP3
ST13
DNAJB7
RPL35A
IQCG
LMLN
NOTCH2NLC
ARHGAP10
NOTCH2
TTC8
GOLGA5
VARS1
RPS27A
CLHC1
NDUFA4
ITGB6
ICMT
HES3
SLC35B1
PDAP1
BUD31
ADK
AP3M1
RABGGTB
DPH6
PI4KB
RPS12
PLAGL1
SMC2
SFI1
EIF4ENIF1
RBBP5
PPP1R1B
PSMD12
ZNF503
NBAS
SERINC5
UFM1
TMED1
HES1
ADNP2
NHS
HSPA1B
SELENOF
HS2ST1
RAB11FIP1
MRPS5
MALRD1
ICE1
FAM104A
C17orf80
USP1
RBKS
BABAM2
DUX4
UBE2I
PIP4P1
OSGEP
APEX1
KDM8
INSM1
BNIP3
NFKBIL1
DDX39B
ATP6V1G2
ATOH1
OR10AC1
URM1
PAF1
MED29
NAV3
TM9SF1
IPO4
TSSK4
ASXL3
UNKL
C16orf91
PROSER1
NHLRC3
PRDM12
RHBDD3
EWSR1
NEK3
MBTPS1
ETS1
ARID3C
DCTN3
RIMKLB
PIN4
PTGES2
HOXA3
HOXA4
C6orf47
BAG6
APOM
LARP7
UNCX
FGF19
RPS29
LRR1
TAF9
RAD17
AK6
OR6B2
NDUFA10
BICRA
CR1L
NUTM2D
ERRFI1
DBX1
TPM1
ANK2
TMEM120B
MYLK4
BFSP1
FAM222A
CERCAM
DUSP6
TLE4
TESC
EVA1A
RBBP7
ME3
ARHGAP11A-SCG5
ARHGAP11A
MUC20
DDAH1
CCN1
PRRX1
TRABD2B
NR2F1
MRPL3
MRTO4
EMC1
SCGB1A1
ADAM18
ZP4
SULF1
LZTS1
CRYAA
CRYAA2
IL17RD
SYBU
SUCLG1
FRG2C
RAI14
NCOA7
SOX21
ID2
SEC22B
SEMA6D
KDM2B
KIF26A
COMMD1
CCT4
PMAIP1
LAMA4
EIF2S3
PARP11
SLC7A5
PPFIBP2
TMEM107
TPRA1
HOXB3
HOXB4
DUSP29
NEK7
PDHB
GTF3C4
DDX31
LRIG1
HOXB1
RGS12
GADD45GIP1
DMRT3
STK36
RNF25
DTX4
RASL10B
PSMB5
CNPY2
SPACA1
RPL7
RDH10
ZFHX4
SEC11C
NEUROD1
ALDH1A2
HNF1A
DIPK1B
LRRC4
DDX3X
CITED2
CAMTA1
HOXD3
TMEM14A
HOXD4
LRATD2
FABP7
SMPDL3A
HK3
PCBD2
CCDC33
ANKLE2
TBX3
DLX4
FXYD2
DSCAML1
MEIS2
TDG
C12orf73
GPR176
CLDN2
PCDH11Y
PAX6
SCN5A
DLL4
GFRA3
PHOX2B
FRMD7
RPN1
BRINP1
TPST2
FOXP2
SLC10A2
PHC2
WDR59
HSPB8
CACNA1D
COL17A1
SCARB1
ZNF585B
ZNF383
RFX2
NID1
CLDN11
DMBX1
MYO10
SKIL
ID1
PDZRN3
SALL1
METTL24
CBFA2T2
BAIAP2
PAH
ASCL1
NEUROG1
EVX1
NMNAT2
CEP41
PRUNE2
KIF21B
PPP1R1A
PDHX
APIP
OAZ3
ZNF214
NLRP14
FOXB1
ZNF367
PAX3
TMEM212
MET
RBM15
MXI1
GAS7
PANK4
HES5
PKNOX2
REV3L
B3GALT5
GTF3A
SMARCA2
ZFX
ABLIM3
FOXD3
TPH2
CDC73
PDPN
HHIP
ERLIN2
TMA16
LPIN1
PAX8
VOPP1
AQP6
ENO1
CPSF4L
CLEC18C
ALKBH5
ZDHHC1
KLF17
ECEL1
CNTN4
FOSB
DAPL1
RFX3
CLEC19A
GPR20
FEZF2
NOXO1
SYNGR3
GFER
PLEKHA5
ZPBP
RGL1
MSX1
LRIG3
TNC
ADGRL2
OCLN
CXCL12
NEDD9
GAD2
GORAB
STARD13
FAM171A2
FSTL1
LHX2
FAM107A
CLGN
ACSS3
PDE4DIP
DHX32
MBNL3
METTL11B
FBLN1
HNMT
CCND1
PDE6B
CNTN1
CDH18
SNAPC1
PNKD
TBC1D8
EFNB2
TMSB15B
GFRA1
OR8J1
GADD45G
UPF3A
CDC42EP2
LIN28B
MDFIC
LDHB
IFNA21
CREB5
CDH16
GATA3
GCSAM
OTX1
EPHA5
ARHGEF28
KLHDC8A
TMEM275
RPL34
BRWD1
HNRNPA2B1
CBX3
AXDND1
SOCS3
ZGPAT
ARFRP1
GUCY1A1
HOXA2
SMURF1
FREM1
SALL4
TMPPE
GLB1
RPS10-NUDT3
RPS10
TIGD1
EIF4E2
JAKMIP1
HOXC6
HOXC5
LIX1
MEIS3
ABCG2
SRY
MEOX1
PPP2R5A
ERICH3
ST18
KLHL7
DHRS4L1
TYRO3
FAM120B
DLL1
PDE12
IRX5
PON2
CATSPERG
VCAN
DNMBP
OPLAH
RPL17-C18orf32
RPL17
DAAM1
RPL24
TLE1
TMEM97
IFT20
CADM3
C8B
ZBTB25
ZBTB1
FGFR2
ZNF746
EGF
LHFPL2
KAZALD1
IGFL3
NRG2
HOXC4
TLE3
DOCK10
GGCT
STRA6
RPS24
POLR3A
ELMOD2
KRT16
SYNPR
FJX1
CA14
PDE1B
RABGAP1L
MEF2C
MYRIP
LHPP
VSTM2L
EIF4E3
FILIP1L
DHRS3
TRIM71
THEMIS
RUNX1T1
RILP
ATOH8
OR5A2
OR5A1
SYNPO
DEFA5
TRIM56
LRRC1
YAP1
GZMK
MAB21L2
HOXB8
HOXB7
HOXB6
RIPOR2
LIPG
GMPR
TLE2
KCNN4
RASL12
KBTBD13
USP29
STXBP5L
ZNF341
NNMT
IRF2BP2
CDK14
GPR82
C5orf63
MIER1
DNAI4
NOTCH2NLB
NOTCH2NLA
NRXN2
RARA
TAGLN3
TCF4
CLMP
DRD2
PDPK1
CEMP1
TDRD7
NXPH2
SCARF2
XIAP
HSPA1L
HSPA1A
CNKSR3
RAN
MUSTN1
ITIH4
C8orf34
ATP6V1B1
TIGD4
ARFIP1
NRARP
CS
PGLYRP1
IGFL4
TANC1
KMT2A
ZFHX2
ECM1
FRRS1L
LRGUK
POP5
ZFHX3
MAFA
NINL
CER1
FABP5
BAZ2B
TTYH1
FHL1
DNAJA1
APTX
PIGR
CBY2
PRR16
RYBP
WBP1L
ME2
TRAP1
FKBP1A
PCDH18
CPA1
SLC22A2
SLC39A6
ELP2
USH1C
OTOG
MTMR7
EFNA5
ADAMTS18
ATP1A4
PRAMEF12
PRAMEF1
CHODL
RFX6
OTOL1
ARL4D
LIG3
CYP51A1
ADGRL3
TRIM65
MRPL38
PPP1R35
ZCWPW1
MEPCE
CACNA1H
CSN3
CRABP2
EIF2S1
ATP6V1D
SPG7
RCOR3
NELFA
UBR2
EPB41L2
CPLX1
RXRG
LIN28A
HNRNPD
ARMC12
CCDC88C
AJUBA
TIAM1
LRRN1
LOC150051
SPCS1
GLT8D1
CDCA7
IGFN1
CYP26A1
METTL3
LRRC10B
SYTL2
MSI1
CUEDC1
GNAI1
LDLRAD3
KRT20
REC8
FAM124A
MSX2
ABCB5
IFI16
PYDC5
CCDC200
ALOX5AP
TMCC3
C1orf100
FRG2
SLC45A3
PAX7
SLC14A1
ARHGAP24
ASB6
FOXL3
CACNA1S
ASCL5
NFE2
ZSWIM6
KEAP1
PAK3
SIK1B
SIK1
BMPR1B
IKBKB
METRN
ANTKMT
CCDC78
BTF3
NAF1
POU3F1
FAM214B
STOML2
PIGO
SLC28A1
HOXA1
GATA6
COX5A
POU2F1
TFDP2
DNMT3B
ATF3
UPP2
TMEM9
ITPRIP
CHD8
CLEC18B
ATXN10
GJA1
TNFRSF19
RIC8B
PPBP
PF4
CXCL5
TEX46
KDM1A
LOXL4
PALM2AKAP2
RARB
EIF4H
LINGO1
ZMAT4
LIPE
CXCL17
CATSPERB
PJA2
DACT2
PCDH8
TMEFF2
EVX2
BAMBI
LEMD2
FGFR4
TPO
PITPNM3
RBP3
CNN3
SLC2A9
KIAA0895
VGLL4
FAT2
LDLRAP1
FOXA2
FRY
PERP
TMEM70
ELOC
SRSF11
LRRC40
OLFML2A
NR6A1
FOXO3
C1orf226
ARL4C
HAAO
CRKL
FABP9
CYRIB
TRDMT1
TP53INP1
PLEKHA6
C1orf141
ADM
TBL1XR1
SUPT20HL1
CPVL
CHN2
RCOR1
SP8
ADAMTS15
RBPJ
DGKZ
EOMES
BANK1
SORBS1
SMC6
GEN1
AHSP
ARSF
HTR1F
HRK
PPP1R2C
RBM20
CCDC169-SOHLH2
CCDC169
BNC2
MECOM
ARHGEF4
SOAT2
IGFBP6
NCOR2
FOXB2
QPRT
NPAS1
CCDC141
SEMA5B
NEBL
IPO11
DIMT1
ZFAND2B
LRRC15
LRP2
C6orf132
N4BP3
TSPAN13
PTGR1
BECN2
SNX1
CIAO2A
PEX2
TTLL6
SPRY1
DICER1
DMD
CCDC198
RHOB
MAP2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PPP1R12B
ADO
ERCC1
TRIM2
ACBD5
HEY1
PLPPR1
HRH3
SIT1
CCDC107
ARHGEF39
SKOR1
TRAF3IP2
STXBP6
TAS2R41
NKX2-8
SH2B1
HECTD3
DST
SLC39A7
RXRB
HSD17B8
RING1
GIGYF1
WWC2
WDR74
STX5
ZNF775
PCBP4
ABAT
CA4
GPR62
OR52E2
ACOT6
ALPK3
BBS9
PKHD1
AIPL1
PIMREG
FLRT3
ATP5MC2
LRRC8C
ATXN7
ONECUT2
SOX11
PKDCC
CLDND1
GPR15
GPC6
GDF10
NECTIN1
KBTBD8
SERPING1
ZNF853
GALNTL5
MROH7
TCF7L2
THRAP3
BTBD1
CEBPA
SRGAP3
EAPP
PANK2
NKX2-6
LCA5
FIGNL2
BCO1
C21orf62
NKIRAS1
NR1D2
LIG4
ABHD13
PIPOX
DRAP1
C11orf68
MNT
CCDC43
PACSIN2
RBPMS
USP17L21
USP17L20
USP17L12
USP17L22
HOXB5
MSI2
FBXO10
SPOCK2
LMO4
KCNIP4
TLN1
CREB3
CFAP69
SYNM
KCTD1
LOC102724265
SLAMF8
TCHP
PVR
NEUROD4
MAP2K6
ADCY8
CDX1
H2BU1
H2AW
KMT2B
SOX5
RFFL
VXN
ID3
CD79A
ARHGEF1
GNB2
FNIP2
CALHM6
ACTL6B
NXPH4
P2RX6
PRRC2C
NEGR1
PADI2
TMEM88B
VWA1
SNCG
MMRN2
ELMO1
CABP7
ADAMTS10
LYPD6B
PTCH2
SPTBN1
KCNN2
ZNF878
FOXP1
DTNB
RPH3A
GPR157
MTF2
SOX6
DLGAP1
NKX2-3
EYS
NEDD4L
GJA3
GYPC
MATR3
NRXN1
PGM2L1
TFAP2B
CCBE1
RTP4
ZNF593
CNKSR1
C1orf232
FLVCR1
NCK1
FAM110D
GPR153