ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1637470 | MOLT-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◣ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

HHIP
CALCOCO1
UCKL1
PRCC
TCEA2
BTRC
CYTH1
TSNAXIP1
RANBP10
TMEM115
MMACHC
CCDC163
PKIG
AP2S1
CCM2
CHMP4B
NUDCD1
IFRD2
PLCL2
PHF12
KBTBD7
FEM1A
CLPB
GTF2H4
PHB
SMPD3
PPIAL4C
AHCYL2
FARSA
CALR
PCDH10
ALDH1A2
SCNM1
LYSMD1
MRPL24
GSPT1
ST3GAL2
ATP2C1
CALR3
C19orf44
SRPK2
BANP
NKAIN4
APBA2
WDPCP
MDH1
RHEX
STAU2
KBTBD6
STATH
KANSL1
CXCR4
NPRL2
CYB561D2
ZMYND10
NFE2
HIKESHI
INTS9
HMBOX1
CR2
PI16
C1orf159
RBL1
PEMT
MICOS13
HSD11B1L
ACADM
VCPIP1
C8orf44-SGK3
IQGAP2
SLC39A1
CRTC2
BOD1
C3orf86
KMT2B
STK17B
DEGS1
ZFYVE1
SLC4A2
CDK5
TRIB1
PPRC1
FRG2C
AGBL1
ZNF444
SHQ1
DGKA
PYM1
ING3
WDR74
CHCHD2
SCAF1
RRAS
GRAP2
NPIPB15
PNKD
AAMP
INVS
ERP44
LZTFL1
PANK4
HES5
GFRA4
EMILIN1
CST5
H2AZ2
CD1B
PPP1R16B
TMTC3
CEP290
BAIAP2
PAFAH2
ARHGEF7
DCLK3
MAD2L1BP
GTPBP2
RUBCNL
NEIL3
GLG1
VPS50
HEPACAM2
PARL
DDX23
CD69
ZNF331
CD1A
PPIAL4G
TLR9
LTB
LST1
CD300A
PPP1R12C
MND1
LAIR1
GNA15
PVRIG
FXYD2
TOX2
NFRKB
UNK
H3-3B
KRTAP16-1
BHLHE23
RAB37
DDX4
ABCF2
CHPF2
MDM4
GSK3A
LGMN
BNIP3L
SUFU
ACTR1A
EPHX2
ZNF225
UBR2
DSTYK
CTU1
REPIN1
AP2M1
GATB
DCAKD
NMT1
MSL2
FBXO48
APLF
FBXL19
GSR
VIPAS39
AHSA1
ARL17B
ARL17A
FGR
PTPN6
C12orf57
CCDC146
RCSD1
RUFY3
ITGA6
GFUS
SEC14L2
FAM222A
TIMM21
FBXO15
DUX4
ZNF337
BIRC5
SLC35B4
ZNF784
LEF1
STAU1
THBS4
TLR6
ZNF821
ZNF335
LAT
EMP3
CCDC114
ABHD12B
ZNF140
KCTD9
CDCA2
LDLRAD4
THEMIS
WNK1
TSSC4
TRAF4
TNFAIP1
IFT20
HSPA13
PRKD2
NAPA
ITGA4
MAP1LC3B2
RPGRIP1L
FTO
GZMA
PSMF1
TJP1
SLC12A6
SLC2A6
MKRN3
FMNL1
PRPF40B
NTAN1
IL23R
RIC8B
SYT12
FNTB
ATP6V0A1
STK25
LSM4
PEX14
DFFA
POLDIP3
CCL1
TMEM70
ELOC
TFEB
NBEAL2
ADAMTS1
PPP1R12B
PYGM
TTI2
RGL4
TMEM101
FAM193A
TNFRSF13B
LARS1
NUF2
MZB1
SOX17
TGM6
H6PD
FOXP1
RCAN1
NSMF
SLFN12
DNM1L
PTK2
STAP1
FASTKD1
BICD2
LMO2
SLC47A1
SCML4
ATP11B
TESPA1
TFPT
PRPF31
ARHGEF3
ZFYVE19
DNAJC17
MRPL1
NME1-NME2
NME1
UBQLN4
LAMTOR2
FBXW11
THYN1
ACAD8
SYTL2
CDT1
TAS2R50
CAPN15
STK4
CCP110
MMP9
SYMPK
FOXA3
JOSD2
ASPDH
N4BP2L2
ZBTB45
PLK1
RPL29
ZNF500
DHX33
FAM3B
TLE3
HECTD1
D2HGDH
TPGS1
TMEM107
FHAD1
OGN
TNFRSF4
BORCS7
RPIA
DTHD1
ARHGAP24
PHF13
DUS3L
ZGPAT
ARFRP1
ASB2
SSBP1
PEX26
CCNG2
PLCG1
CCAR2
C8orf58
ZNF133
DESI2
VOPP1
ALDH3B2
SRSF10
RPS26
MX2
RFX8
VAT1
UTP3
NET1
TMC6
TMC8
ZNF354A
IFIT3
NCLN
UBE3C
DOK2
DPP6
RLN1
TFAP2E
MED23
LIMS4
LIMS3
FAM185A
BCL9
WDR87
SIPA1L3
ATAD2
EPHA1
SOX6
C11orf58
WIPF1
FAM168A
RANGAP1
OR4D1
ZNF56
SNX17
EIF2B4
DHRS11
IL17RA
OSBPL5
ZNF165
DRC7
FCRLB
NUCB2
FBXO46
MEIOSIN
DBNDD1
HRH2
TNFRSF1A
ICAM2
HDAC7
PRRG2
NOSIP
RNASEH2C
CDK8
OR10T2
MAMSTR
MBNL1
TMEM258
FEN1
ZNF354B
TTF1
TES
DNAJB4
CCDC90B
DYNC1I2
SIRT4
COPS4
SCGB1C1
ODF3
MFAP4
CSTA
MEN1
IPO4
PNLIPRP3
SLC33A1
LYST
COX7C
FAM228B
SF3B6
LRIG1
ATXN7
RTTN
MED15
TMEM245
ZNF605
ARID3B
BRF2
PPIAL4F
PPIAL4E
PPIAL4D
CHCHD3
RALGAPA2
ORMDL3
PTCRA
ZNF226
ERAP1
DLC1
NSFL1C
RBM38
ADORA2A
EIF3F
SMAD7
GP5
ZFYVE28
CFAP99
MTRNR2L1
RETNLB
FIGNL2
IFNB1
ABTB2
LCK
WBP2
STX18
PPIAL4A
TTC13
TRAPPC3
RAB1A
NUDT13
DEK
CDK5RAP1
SERHL2
TRAF3IP3
MSH5
CLIC1
CLEC16A
DEXI
APBB1
WDR24
SMO
ZNF749
GGA2
TMEM163
DCP1A
FCGR2A
MAP3K8
TTC33
TMEM59
BUB1B
SVIP
LIMS1
USP48
UBE2J1
PPAN-P2RY11
PPAN
ANGPTL6
FMO1
SNX1
CIAO2A
LEPROTL1
C19orf53
TAF3
CISD3
ZNF408
ARHGAP1
HIPK1
POMT1
TSC1
GFI1B
AURKAIP1
ARHGEF1
TRAT1
ZSCAN22
GALK2
COPS2
CDK5RAP3
SELENOH
AAR2
UBC
TRIP4
EVL
MTA3
PPP1R18
PANK3
SNRPD3
GUCD1
RIPK4
STMN3
RTEL1
ASNS
NDUFB3
FAM126B
STK16
GLB1L
CD59
RABAC1
TLE4
GSTA4
ZNF563
SNRPB
CXXC5
TCF3
CFAP20
C19orf67
AQP3
TBC1D31
TUT1
CCNI
IDNK
MYO1G
PIGU
SMARCAL1
ETV3
SF3A3
MRPS18C
HELQ
TMEM102
FGF11
ASXL1
TOR1AIP2
TOR1AIP1
GPANK1
CSNK2B
LY6G5B
C6orf47
ZFYVE21
XRCC3
CALM2
MCM7
AP4M1
IFNA1
WDR97
MAF1
THAP11
NUTF2
CENPT
GTF3C2
YIPF2
TIMM29
SWI5
GOLGA2
KIAA0408
USP30
TNPO3
GPR160
RASAL3
TRAF7
KAT7
RPL18A
KCTD5
ATP2A3
PSMD11
CCND3
TAF8
PHF19
HDAC9
FRG2
MYO18A
CXorf49B
CXorf49
TM7SF3
SCRIB
MTMR9
ATP13A1
ZNF101
PEX3
ADAT2
MTF2
ADD3
RACGAP1
ZNF354C
SLA2
ZMAT5
UQCR10
HEXIM1
SH3BP5
CLDND1
ZW10
ARHGDIB
PPIP5K2
GIN1
COX16
ADAD2
TMEM127
CIAO1
BCL3
CHRNA3
GPKOW
GCSAM
SLC26A11
SGSH
UBAC1
ZNF169
KRR1
ETFDH
C4orf46
COL6A2
C16orf91
GTPBP3
ANO8
ZP1
ZAP70
TTBK1
SUGP1
MAU2
GRHL3
SMCO1
ASPRV1
SIRT2
NFKBIB
RBM6
NDUFS3
KBTBD4
HEXIM2
TMEM229B
GATA2
FAM184B
TMEM160
ADARB1
SYTL3
THRAP3
AQR
PEX5L
NOP14
GRK4
RBBP5
LAX1
FOXN1
PTDSS2
ZSWIM8
CHCHD1
ZNF224
PEAK1
HMG20A
ARL5C
PHF23
GABARAP
DVL2
ANTKMT
CCDC78
ARHGAP4
RPS7
SSH2
SMARCA2
SLA
RPS20
ARHGEF2
ZNF527
CHST12
ATG9B
ABCB8
DOCK10
STAT4
NSA2
GFM2
ZNF595
VKORC1
ZNF235
FDPS
REXO4
ADAMTS13
CCDC150
AFF3
ALG10
MED18
NT5C2
OR10P1
YJU2
TACO1
PLAGL1
ACTR3C
TMEM45B
HEMGN
MRPL44
CANT1
KCNQ1
ARMH3
ACSF3
BUB3
XPC
LSM3
CTHRC1
ANXA1
CBARP
ATP5F1D
AFF1
MYLK4
ESCO2
RTN4
PRDM1
PCNP
SLC32A1
TMIGD1
GTSE1
CD28
RBM28
TRAFD1
ACOT7
ANKRD40
BTN3A2
LPAR6
WBP1L
SMG8
SCGB1C2
ZNF343
METTL11B
ZNF26
NOTCH3
LIG4
TOB1
SPATA46
CCDC97
CD3E
WDR46
PFDN6
MTBP
MRPL13
DIABLO
VPS9D1
RAPGEF1
VPREB1
PA2G4
ENTPD4
PALLD
OSCAR
NDUFA3
BLK
H4C3
H1-6
UBE3B
AOAH
FLT1
TRAK2
STRADB
PPP2R5B
TRIM47
MARS1
ARHGAP9
TULP2
NUCB1
FAM8A1
UMODL1
SNAPC3
MRPS31
CASS4
GPR157
MTRF1
SERPINI1
PDCD10
CFAP410
ZSWIM9
LIG1
NOP16
HIGD2A
DEF6
RAB22A
RPP40
RPL23A
RAB34
VRK1
MAP3K7CL
GUK1
LIME1
TIFA
SDCCAG8
CEP170
AHCY
CCDC15
SOD2
PPP5D1
CALM3
WTAP
CD46
PLAAT5
CACNA2D4
RPS13
MRPS16
KIF20A
BRD8
TOMM40
CLMP
PTPN22
CUEDC1
SLC25A19
CIC
TMEM222
DHX8
TOE1
MUTYH
NAGLU
TUBGCP3
SIT1
CCDC88A
GCNT1
UTRN
TBC1D21
INTS12
GSTCD
FAM163B
DAB2IP
RUVBL1
SDE2
KRI1
CDKN2D
BPI
TCF7
NIBAN3
TMEM123
UHRF2
YPEL3
TBX6
TARBP2
MAP3K12
C12orf73
RORC
LNPEP
NEDD8-MDP1
NEDD8
GMPR2
GOLGA3
ALKBH3
AGK
NFKBIZ
DGAT1
KDM3A
PPFIBP2
IRX2
C5orf38
WRNIP1
GPR137
SIRT6
ANKRD24
ZSCAN5A
ASAP1
PSENEN
LIN37
SERBP1
STARD10
GNG12
FBLN2
CMTM1
GINS3
KLHL20
GTF2H2C_2
GTF2H2C
MUS81
CFL1
ASIP
NDUFS7
RANBP1
CLN3
APOBR
PUS10
PEX13
TTC39C
NCOR2
DLX5
SLC7A8
PIK3CG
FNDC11
PCM1
MEF2C
CASP8
ANXA4
AAK1
PPIAL4H
NKD1
SCN3A
CHMP7
ADGRE1
SUCLG2
CNPY2
SEL1L
CTDP1
RAB30
C17orf75
NANOS3
ADGRG1
UBE2V1
ARHGAP45
TRRAP
HBP1
METTL26
C12orf43
PABPC1
SYNRG
PRKCI
NRDE2
MAX
ATP5MF-PTCD1
ATP5MF
EMSY
CD3G
CD3D
SYNGR4
PSMC2
DNAJC2
ADGRE2
SEPTIN9
CNOT4
LSG1
FTL
NMT2
OSBPL8
PTAFR
EPSTI1
NEIL2
GRK6
STING1
CTF1
BCL7C
NUP153
NR1H3
ACP2
FCSK
CLTC
THOC2
TRAF3IP2
CYP2U1
ANAPC1
RPL22
SERTAD2
SBF1
WBP1
INO80B
FKBP5
ZKSCAN8
B3GALT4
VPS52
RPS18
NOMO3
NOMO2
CYFIP2
TSC22D4
NYAP1
TMEM199
POLDIP2
CSNK1G3
SIGLECL1
BOLA1
ALG10B
SLC24A1
INTS14
EIF1AD
BANF1
RNF166
NCR2
METTL24
OR1F1
TMEM208
LRRC29
ZNF227
TMEM41A
CDKN1A
ZNF850
ARMC1
S100A6
S100A4
S100A5
SOX4
ZC3HC1
SLC39A3
VPS41
RNF220
PCBP3
ERVH48-1
DEPDC7
ZCCHC8
DUSP2
SLC39A8
DDX49
COPE
GABPB2
MRPL3
GTF2H2
EIF4A2
BRWD1
RARA
DEFB4A
SHC4
ATP6V0E2
CBFA2T3
AKNA
SPC25
ADO
SDHAF3