ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065547 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◣ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SMCO1
BSDC1
APOA1
C19orf18
AADACL4
GTPBP6
ITGB3BP
EFCAB7
DEGS2
YPEL3
TBX6
MAPRE2
KRBA1
MTRNR2L8
UBE2F
PDE11A
RABGAP1
ZNF572
TMEM229B
FAM184A
ZNF829
ZNF568
PTDSS2
ANO9
GCNT7
FAM209A
ZFP30
TMEM89
RABGAP1L
SAMD4B
RBBP5
ZNF623
YWHAQ
SUMO3
PRSS38
STC1
SF3A3
MTF2
THEM4
DUSP6
ZNF324B
GALNT1
EXTL2
DHRS2
DBNDD2
COL18A1
DKKL1
KRTAP5-1
TTI2
ZNF32
NUF2
SSBP1
OPRL1
LKAAEAR1
ZNF772
MTRNR2L2
MSH3
DHFR
DISP1
CANT1
ZBED9
TMEM14C
LCN8
MSRA
CBX1
ACTL8
MTR
ARHGAP39
PRRT1B
COL23A1
TMEM132A
C2orf88
SDR42E1
COX16
AURKAIP1
ZNF117
SLC1A7
LARP1
TEX50
CALCRL
RBBP9
AMD1
CDK19
SLC33A1
RPS29
ADCY10
GRAMD4
RERE
OR4K17
ZNF577
IL36RN
IL36B
CAT
RNF217
DNAJC25-GNG10
DNAJC25
UTP3
DNAJB12
FAM234A
ANP32D
TATDN2
MROH7
GBA
RNF187
IGFALS
HLA-E
RCAN1
MYO1H
TBC1D19
CFAP298-TCP10L
CFAP298
TTC32
SPANXC
ATP5MC2
RPL37
CALD1
JMJD1C
GALNTL5
PAXBP1
MMACHC
CCDC163
TRAPPC8
TLR2
ZNF20
CFHR4
GTF2H4
ZSCAN22
ALG14
ELAVL2
TMEM44
CD14
ISY1-RAB43
ISY1
MBOAT4
TMEM242
TFPT
PRPF31
C3orf14
RAB30
GABRR2
PEX3
ADAT2
WDR11
MED23
COX7A2
ZMPSTE24
CEP85L
TMEM259
CNN2
NEMF
ELFN2
GABPB2
ZNF134
TRMT11
GRPEL2
APOBEC3B
MMEL1
SUPT7L
SLC4A1AP
MITD1
CLEC12A
SLC45A4
SULT1C4
FAM13A
FAM13B
UFC1
RBM33
PPP1R11
MLPH
LPIN1
COA6
RNF125
NUP107
SPANXB1
NOS3
CRYAA2
CRYAA
ZNF391
GLIPR1L2
CNIH4
LRCOL1
TATDN3
NSL1
SAR1B
PCDH15
HEATR1
RPS7
DCP1A
FABP6
ILF2
KDM3A
CCDC59
ENG
BORCS6
MNAT1
PPRC1
CEP85
REXO4
ADAMTS13
CCDC120
TRMT5
SLC38A6
SNRPD3
GUCD1
TBL1X
GTPBP3
ANO8
EIF2S1
ATP6V1D
MAMDC2
OSGEPL1
NME1-NME2
NME1
PDCD6IP
TRIP4
TEFM
ZNF546
TACO1
BRF2
ZNF165
B4GALNT2
CDC5L
FAM153B
EIF3F
ATG5
DMAP1
IRF2BP2
PNMA2
DPYSL2
RCAN2
DSTYK
MOB4
ZNF501
NDUFS7
SKP2
LMBRD2
RPS13
SLC25A53
EIF2D
PAFAH2
ATF7IP
NDUFB3
FAM126B
TIGD2
LOC102724265
UBR2
SPAAR
CPPED1
ZNF571
ZNF540
NEK7
POLR3B
GSTA4
KRTAP10-1
ZNRF4
CTAG1B
CTAG1A
CLTB
TTC26
NOP16
HIGD2A
SAMD1
ZNF561
SNRPE
SNCG
MMRN2
MAD1L1
LUC7L2
FMC1-LUC7L2
FMC1
NAT10
REEP3
CDYL
GASK1A
CNGA1
HDAC2
MAN2A1
SCMH1
ZNHIT6
ZNF292
TPK1
GPRC5C
AASDH
LIMK1
SYT1
PDE1A
PBX3
CCDC107
OSGIN1
ZNF841
POLN
HAUS3
IARS1
TMEM41A
CYCS
VPS52
RPS18
TMEM72
B3GALT4
MRPS16
LOC100129484
RAB18
SNIP1
DNALI1
SEC23B
GADD45A
WDPCP
MDH1
NSA2
GFM2
RPL5
CCNI
AP3S2
NCOA7
ITFG2
ATG4C
ZNF461
CCDC33
HIGD2B
BBS4
SLC2A7
RUNDC3B
IL1RAP
VAV3
SELENOH
INTS5
IL21R
CACNG1
PLCH1
SF3B5
GYPC
YJU2
LOC100421372
HSPA14
CDNF
FRA10AC1
NME4
CCNC
RPL7A
MED22
TMEM107
SURF2
SURF1
TOMM20
SLC24A1
INTS14
AHCYL1
FAM199X
DNM2
HDAC8
IL36A
DCT
LRRC49
THAP10
GORASP2
ACOX3
TRMT44
PACSIN2
SLAIN1
COMMD2
RIMBP3C
RIMBP3B
UBE2L3
FOXO3B
TM2D1
ZNF790
ZNF383
PTGS1
ZNF585A
SLC43A2
ZSCAN30
TMBIM6
YTHDC2
PRIM2
PLEKHM3
H4C15
H4C14
MRPS23
UBOX5
FASTKD5
SGMS2
MRPS18C
HELQ
KLHL20
PPIP5K2
GIN1
SLC35E2A
TARS3
KRR1
PLEKHA3
FKBP7
BCAR3
LSG1
VTA1
NMBR
SLC35A3
SMG7
CSTF2T
PPDPF
SCUBE3
HTRA2
DQX1
TBC1D32
FEM1C
RPS15
PPIL3
NIF3L1
TXLNB
MAGEA11
PLK2
BAAT
TUT1
SLITRK5
PARPBP
NUP37
DHRS13
UCHL3
COMMD6
BCL2L13
DHTKD1
C10orf88
NUDT15
RPL27
TMEM79
SMG5
TTLL1
GTF2H2
GTF2H2C
AARS2
RBM45
AKT1S1
KRTAP19-2
DRG2
PIH1D2
NKAPD1
COL4A5
COL4A6
SLC39A6
SPAG9
DEK
IFT88
POLDIP3
SRP9
TPM4
DYRK4
FBXO44
FBXO2
UTP25
SEM1
WBP1
INO80B
ABCG1
ZBTB25
ZBTB1
ARF1
TSPAN2
ARID1A
MED18
TMEM101
CEP120
MIS18BP1
CSTF1
AURKA
EFCAB10
EPRS1
C1orf167
SPRR2F
TMEM208
LRRC29
ZSWIM7
TTC19
ZMYND11
CCDC150
HACL1
BTD
EMILIN1
GSTM5
SAMD4A
RAG2
IFTAP
ASB13
CALCB
SNRPB
DNAJB13
SNRPD1
TMEM30A
TTC3
TSTD3
EIF1AD
BANF1
ECHDC1
KDM6B
RAB5IF
MAST2
PPIG
PIKFYVE
RPA2
RSPH3
DEDD
HTR3A
TMEM275
STK32C
TNPO3
VPS35L
PPP3CA
THOC5
ATP1A1
HAX1
SLC35B1
TIAM1
CCDC90B
ZNF610
ALKBH3
RALBP1
AIFM1
IRAK2
ARID3B
GCGR
MRPL1
TSSC4
CREM
POLG
MAGOH
CRNKL1
CFAP61
SLCO1A2
C1orf198
B3GALNT2
EPHA3
ARHGAP24
BRAP
ACAD10
NKAP
RPS14
WDR74
SMIM13
IRF9
RPTOR
EFHD1
SPATA5
NUDT6
ARMCX5-GPRASP2
SPDEF
ARMCX5
NR1H3
ACP2
CFAP20
POLR1H
TMA16
DCLRE1B
AP4B1
RWDD1
PARP2
SNAPC5
FCMR
ATR
QRICH1
CUL5
PARK7
TMEM205
CCDC159
VPS33A
SLC17A5
SNRNP35
PACS2
BRF1
CEP350
RANBP17
AQP10
DDX41
RIMKLB
ZNF56
RARRES1
ATP8B2
THAP4
ATG4B
NTPCR
FAAH
REN
VPS13B
KHNYN
CBLN3
MTO1
ZSCAN31
RAB6D
ZNF791
ZNF490
ZKSCAN3
ATP5F1B
GRAMD1B
LSM5
AVL9
PDGFD
ZNF302
NTN1
C16orf54
SF3B6
FAM228B
RAD51AP1
C12orf4
GLI1
INTS12
GSTCD
PPP6R1
SCAND1
SREK1IP1
CWC27
NEK4
TMEM128
MAP3K7CL
CC2D2B
CCT8
ZNF57
CNIH3
TRUB2
COQ4
PERM1
HTR5A
STX16
KLRD1
TSFM
PUS10
PEX13
ZNF527
ZZEF1
CYB5D2
BANP
RGPD2
RGPD1
CCDC174
NQO2
RTTN
MRPS31
MRPL48
POMGNT1
LTN1
S100A5
S100A4
S100A3
AP1G1
LURAP1
LTA4H
OSGEP
APEX1
HMGB1
USPL1
CDC73
ZBTB45
GMEB2
FDXACB1
C11orf1
SCML4
ZSCAN25
GTF2B
HMGCR
PROS1
PBLD
HNRNPH3
ERCC6
TFIP11
ALG10B
CBWD5
CBWD3
SRSF11
LRRC40
LONP1
CATSPERD
TLE3
NUP42
C6orf118
PDCD7
SLTM
INTS9
HMBOX1
TTLL12
MTIF2
C8orf37
SMG8
TBCB
CCDC130
CCDC97
SDHAF3
MRPL42
CARD8
PRRG2
NOSIP
RBM7
C11orf71
SRCAP
LOC730183
PPP3R1
TRAPPC2
OFD1
MTOR
TPR
ODR4
N6AMT1
SASS6
TYW3
CRYZ
SHC3
COA7
METTL7B
TMEM43
CHCHD4
SPSB1
FLYWCH2
GJB7
MAP7D2
CHID1
AAR2
TXNDC9
EIF5B
CBWD2
RNF215
FAM50B
CNPY1
TDP2
ACOT13
ESR2
GALK2
COPS2
TTC38
PKDREJ
COG2
SRRM1
AJUBA
WDHD1
SOCS4
ANO6
GPATCH3
SRA1
LMNTD1
ZUP1
MLIP
ST6GALNAC6
COPS4
TIPARP
SLC35A1
MRPL40
HIRA
CCDC200
HECTD1
CNTRL
C5
APOL2
KRTAP10-9
RAMAC
ZFYVE28
MATK
SRP54
MAP3K7
SH3RF2
INSYN2B
ZNF566
INKA2
DDX20
ARMC7
CYP27A1
GSTP1
TCTE3
ERMARD
NMT2
CHEK1
ZBTB2
CCDC43
PPP2R3A
MAGI2
PNPLA7
RPAP2
GLMN
RBBP6
GALT
DENND2C
RPL11
EPB41
PFKM
SENP1
FBXO22
ATG101
PIGL
NCOR1
C6orf226
ZNF2
DARS2
CENPL
ARHGEF16
LONRF2
RANBP2
FAF1
IRAK1BP1
ZNF589
ZNF260
ZNF562
SLC44A1
TUBB
MDC1
CD2BP2
PI4K2A
KIF12
ALG10
ZNF518A
DLC1
TMEM167B
ZNF286A
EP400
LRRC14B
PCDH9
PRC1
GPR176
FBXO31
TOR1AIP2
TOR1AIP1
ZNF317
RMND1
ARMT1
TTC14
GRM4
TIMM17B
PQBP1
ZNF385A
TOMM20L
ZNF331
ZBTB8OS
RBBP4
ALG9
PLAC8
MRS2
SLC9A3R2
SMIM35
CYB5R4
CCNL1
RNF207
DROSHA
C5orf22
TRIM38
PNISR
ATP1B1
FLRT3
PSG5
WDR36
USHBP1
DDX18
DHX16
FBXW7
STAU1
TRMO
AGPAT3
DDX27
IFT172
TARM1
NUP54
MTBP
MRPL13
SEC22B
PNPO
DHX8
PDE2A
UBXN4
SLC10A7
SELP
H4C4
H2BC6
SYNE1
STX18
SNX17
EIF2B4
TNFRSF1B
CD55
UFL1
CTH
HEXA
FAM124B
BAIAP2
MRPL21
IGHMBP2
TGFBR2
ARHGAP19
DNAJC21
LRFN3
SS18
POLR2J3
DCAF10
PDE12
SLC3A2
GLIS2
SOBP
TXLNG
RFC1
NPAS4
LRP6
AQP2
CRBN
INTS2
C6orf89
RETSAT
CDK14
TBRG4
AGBL3
FOXP1
NUP133
SARS2
MRPS12
SATB1
NECAP2
RPS3A
RPS26
NUP205
CHCHD6
CCDC124
RPL22L1
C4orf48
CYP17A1
KDM1A
TEX46
ZNF408
ARHGAP1
PES1
EIF4E
ZNF570
ZNF569
NOL8
CENPP
ZC3H10
RPL41
DHDDS
BASP1
RBM26
RBPJ
SCCPDH
ZMYND8
SESN1
CEP57L1
EVPL
CMPK1
DUSP12
FN3K
RNF182
DUX4
STAT3
SUGCT
MPLKIP
DDX1
CLASP2
SELENOT
ST7
MMP20
TAF10
LYRM2
PLEKHH3
CNTNAP1
CCR10
PPP6R3
ACY1
CLUAP1
C16orf90
ZNF484
SCYL3
NOL11
HINT3
DUS2
DDX28
SIAH1
EFCAB2
FAN1
RPL37A
ZNF14
GBX1
SLC25A51
PARP15
PHIP
PTPN4
CYB561D1
DPP8
ZNF254
EFR3B
NEUROG1
PLVAP
C1GALT1C1L
ACYP2
C19orf12
KIAA1191
ARL10
SNX8
PPARGC1B
PITHD1
FBXO16
FZD3
CLIC5
ENPP4
GTF2H2C_2
FAM160B1
ASNS
EIF5A2
MIDEAS
COMMD9
EIF4G2
NFKBIL1
ATP6V1G2